Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing

Detalhes bibliográficos
Autor(a) principal: Casaril, Aline Etelvina
Data de Publicação: 2019
Outros Autores: Alonso, Diego Peres [UNESP], Franco, Karina Garcia, Niz Alvarez, Marcus Vinicius [UNESP], Gomes Barrios, Suellem Petilim, Fernandes, Wagner de Souza, Moura Infran, Jucelei de Oliveira, Moura Rodrigues, Ana Caroline, Martins Ribolla, Paulo Eduardo [UNESP], Oliveira, Alessandra Gutierrez de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1371/journal.pone.0223277
http://hdl.handle.net/11449/196875
Resumo: Lutzomyia longipalpis is the main vector of Leishmania infantum, the causative agent of visceral leishmaniasis in the Neotropical realm. Its taxonomic status has been widely discussed once it encompasses a complex of species. The knowledge about the genetic structure of insect vector populations helps the elucidation of components and interactions of the disease ecoepidemiology. Thus, the objective of this study was to genotypically analyze populations of the Lu. longipalpis complex from a macrogeographic perspective using Next Generation Sequencing. Polymorphism analysis of three molecular markers was used to access the levels of population genetic structure among nine different populations of sand flies. Illumina Amplicon Sequencing Protocol' was used to identify possible polymorphic sites. The library was sequenced on paired-end Illumina MiSeq platform. Significant macro geographical population differentiation was observed among Lu. longipalpis populations via PCA and DAPC analyses. Our results revealed that populations of Lu. longipalpis from the nine municipalities were grouped into three clusters. In addition, it was observed that the levels of Lu. longipalpis population structure could be associated with distance isolation. This new sequencing method allowed us to study different molecular markers after a single sequencing run, and to evaluate population and inter-species differences on a macrogeographic scale.
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spelling Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation SequencingLutzomyia longipalpis is the main vector of Leishmania infantum, the causative agent of visceral leishmaniasis in the Neotropical realm. Its taxonomic status has been widely discussed once it encompasses a complex of species. The knowledge about the genetic structure of insect vector populations helps the elucidation of components and interactions of the disease ecoepidemiology. Thus, the objective of this study was to genotypically analyze populations of the Lu. longipalpis complex from a macrogeographic perspective using Next Generation Sequencing. Polymorphism analysis of three molecular markers was used to access the levels of population genetic structure among nine different populations of sand flies. Illumina Amplicon Sequencing Protocol' was used to identify possible polymorphic sites. The library was sequenced on paired-end Illumina MiSeq platform. Significant macro geographical population differentiation was observed among Lu. longipalpis populations via PCA and DAPC analyses. Our results revealed that populations of Lu. longipalpis from the nine municipalities were grouped into three clusters. In addition, it was observed that the levels of Lu. longipalpis population structure could be associated with distance isolation. This new sequencing method allowed us to study different molecular markers after a single sequencing run, and to evaluate population and inter-species differences on a macrogeographic scale.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Univ Fed Mato Grosso do Sul, Programa Posgrad Doencas Infecciosas & Parasitari, Campo Grande, MS, BrazilUniv Fed Mato Grosso do Sul, Lab Parasitol Humana, Campo Grande, MS, BrazilUniv Estadual Paulista, Dept Parasitol, Lab Pesquisas & Anal Genet, Botucatu, SP, BrazilUniv Estadual Ceara, Lab Doencas Parasitarias, Fortaleza, Ceara, BrazilUniv Estadual Paulista, Dept Parasitol, Lab Pesquisas & Anal Genet, Botucatu, SP, BrazilCAPES: 001Public Library ScienceUniversidade Federal de Mato Grosso do Sul (UFMS)Universidade Estadual Paulista (Unesp)Univ Estadual CearaCasaril, Aline EtelvinaAlonso, Diego Peres [UNESP]Franco, Karina GarciaNiz Alvarez, Marcus Vinicius [UNESP]Gomes Barrios, Suellem PetilimFernandes, Wagner de SouzaMoura Infran, Jucelei de OliveiraMoura Rodrigues, Ana CarolineMartins Ribolla, Paulo Eduardo [UNESP]Oliveira, Alessandra Gutierrez de2020-12-10T19:58:54Z2020-12-10T19:58:54Z2019-10-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article15http://dx.doi.org/10.1371/journal.pone.0223277Plos One. San Francisco: Public Library Science, v. 14, n. 10, 15 p., 2019.1932-6203http://hdl.handle.net/11449/19687510.1371/journal.pone.0223277WOS:000532398600046Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPlos Oneinfo:eu-repo/semantics/openAccess2021-10-23T09:41:33Zoai:repositorio.unesp.br:11449/196875Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T09:41:33Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
title Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
spellingShingle Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
Casaril, Aline Etelvina
title_short Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
title_full Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
title_fullStr Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
title_full_unstemmed Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
title_sort Macrogeographic genetic structure of Lutzomyia longipalpis complex populations using Next Generation Sequencing
author Casaril, Aline Etelvina
author_facet Casaril, Aline Etelvina
Alonso, Diego Peres [UNESP]
Franco, Karina Garcia
Niz Alvarez, Marcus Vinicius [UNESP]
Gomes Barrios, Suellem Petilim
Fernandes, Wagner de Souza
Moura Infran, Jucelei de Oliveira
Moura Rodrigues, Ana Caroline
Martins Ribolla, Paulo Eduardo [UNESP]
Oliveira, Alessandra Gutierrez de
author_role author
author2 Alonso, Diego Peres [UNESP]
Franco, Karina Garcia
Niz Alvarez, Marcus Vinicius [UNESP]
Gomes Barrios, Suellem Petilim
Fernandes, Wagner de Souza
Moura Infran, Jucelei de Oliveira
Moura Rodrigues, Ana Caroline
Martins Ribolla, Paulo Eduardo [UNESP]
Oliveira, Alessandra Gutierrez de
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Mato Grosso do Sul (UFMS)
Universidade Estadual Paulista (Unesp)
Univ Estadual Ceara
dc.contributor.author.fl_str_mv Casaril, Aline Etelvina
Alonso, Diego Peres [UNESP]
Franco, Karina Garcia
Niz Alvarez, Marcus Vinicius [UNESP]
Gomes Barrios, Suellem Petilim
Fernandes, Wagner de Souza
Moura Infran, Jucelei de Oliveira
Moura Rodrigues, Ana Caroline
Martins Ribolla, Paulo Eduardo [UNESP]
Oliveira, Alessandra Gutierrez de
description Lutzomyia longipalpis is the main vector of Leishmania infantum, the causative agent of visceral leishmaniasis in the Neotropical realm. Its taxonomic status has been widely discussed once it encompasses a complex of species. The knowledge about the genetic structure of insect vector populations helps the elucidation of components and interactions of the disease ecoepidemiology. Thus, the objective of this study was to genotypically analyze populations of the Lu. longipalpis complex from a macrogeographic perspective using Next Generation Sequencing. Polymorphism analysis of three molecular markers was used to access the levels of population genetic structure among nine different populations of sand flies. Illumina Amplicon Sequencing Protocol' was used to identify possible polymorphic sites. The library was sequenced on paired-end Illumina MiSeq platform. Significant macro geographical population differentiation was observed among Lu. longipalpis populations via PCA and DAPC analyses. Our results revealed that populations of Lu. longipalpis from the nine municipalities were grouped into three clusters. In addition, it was observed that the levels of Lu. longipalpis population structure could be associated with distance isolation. This new sequencing method allowed us to study different molecular markers after a single sequencing run, and to evaluate population and inter-species differences on a macrogeographic scale.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-03
2020-12-10T19:58:54Z
2020-12-10T19:58:54Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1371/journal.pone.0223277
Plos One. San Francisco: Public Library Science, v. 14, n. 10, 15 p., 2019.
1932-6203
http://hdl.handle.net/11449/196875
10.1371/journal.pone.0223277
WOS:000532398600046
url http://dx.doi.org/10.1371/journal.pone.0223277
http://hdl.handle.net/11449/196875
identifier_str_mv Plos One. San Francisco: Public Library Science, v. 14, n. 10, 15 p., 2019.
1932-6203
10.1371/journal.pone.0223277
WOS:000532398600046
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Plos One
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dc.format.none.fl_str_mv 15
dc.publisher.none.fl_str_mv Public Library Science
publisher.none.fl_str_mv Public Library Science
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
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reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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