Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants

Detalhes bibliográficos
Autor(a) principal: Miranda,Vicente Savonitti
Data de Publicação: 2007
Outros Autores: Farias,Paulo Roberto Silva, Roberto,Sérgio Rufo, Lacava,Pedro Magalhães
Tipo de documento: Relatório
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162007000500005
Resumo: The Citrus Variegated Chlorosis and the Coffee Leaf Scorch are some of the many destructive diseases caused by Xylella fastidiosa, a gram-negative bacterium limited to the xylem of affected plants. As its genetic characterization is still not well established, different isolates of X. fastidiosa from citrus and coffee were evaluated through RAPD (Random Amplified Polymorphic DNA) technique to characterize and classify these isolates based on similarity coefficients. Sixteen isolates of X. fastidiosa were used on this trial, obtained from citrus, coffee and almond. The genetic polymorphism evaluation was performed using six arbitrary 10-base primer pairs. It was possible to establish a dendogram in which the isolates were classified into five groups (A, B, C, D and E). A prevalence of citrus isolates in groups A and D was observed. In groups B and C, there was a prevalence of coffee isolates meanwhile the group D consisted of the almond isolate, solely.
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spelling Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plantsRAPDgram-negative bacteriumgenetic divergenceThe Citrus Variegated Chlorosis and the Coffee Leaf Scorch are some of the many destructive diseases caused by Xylella fastidiosa, a gram-negative bacterium limited to the xylem of affected plants. As its genetic characterization is still not well established, different isolates of X. fastidiosa from citrus and coffee were evaluated through RAPD (Random Amplified Polymorphic DNA) technique to characterize and classify these isolates based on similarity coefficients. Sixteen isolates of X. fastidiosa were used on this trial, obtained from citrus, coffee and almond. The genetic polymorphism evaluation was performed using six arbitrary 10-base primer pairs. It was possible to establish a dendogram in which the isolates were classified into five groups (A, B, C, D and E). A prevalence of citrus isolates in groups A and D was observed. In groups B and C, there was a prevalence of coffee isolates meanwhile the group D consisted of the almond isolate, solely.Escola Superior de Agricultura "Luiz de Queiroz"2007-10-01info:eu-repo/semantics/reportinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162007000500005Scientia Agricola v.64 n.5 2007reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162007000500005info:eu-repo/semantics/openAccessMiranda,Vicente SavonittiFarias,Paulo Roberto SilvaRoberto,Sérgio RufoLacava,Pedro Magalhãeseng2007-10-05T00:00:00Zoai:scielo:S0103-90162007000500005Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2007-10-05T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
title Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
spellingShingle Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
Miranda,Vicente Savonitti
RAPD
gram-negative bacterium
genetic divergence
title_short Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
title_full Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
title_fullStr Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
title_full_unstemmed Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
title_sort Genetic characterization of Xylella fastidiosa isolated from citrus and coffee plants
author Miranda,Vicente Savonitti
author_facet Miranda,Vicente Savonitti
Farias,Paulo Roberto Silva
Roberto,Sérgio Rufo
Lacava,Pedro Magalhães
author_role author
author2 Farias,Paulo Roberto Silva
Roberto,Sérgio Rufo
Lacava,Pedro Magalhães
author2_role author
author
author
dc.contributor.author.fl_str_mv Miranda,Vicente Savonitti
Farias,Paulo Roberto Silva
Roberto,Sérgio Rufo
Lacava,Pedro Magalhães
dc.subject.por.fl_str_mv RAPD
gram-negative bacterium
genetic divergence
topic RAPD
gram-negative bacterium
genetic divergence
description The Citrus Variegated Chlorosis and the Coffee Leaf Scorch are some of the many destructive diseases caused by Xylella fastidiosa, a gram-negative bacterium limited to the xylem of affected plants. As its genetic characterization is still not well established, different isolates of X. fastidiosa from citrus and coffee were evaluated through RAPD (Random Amplified Polymorphic DNA) technique to characterize and classify these isolates based on similarity coefficients. Sixteen isolates of X. fastidiosa were used on this trial, obtained from citrus, coffee and almond. The genetic polymorphism evaluation was performed using six arbitrary 10-base primer pairs. It was possible to establish a dendogram in which the isolates were classified into five groups (A, B, C, D and E). A prevalence of citrus isolates in groups A and D was observed. In groups B and C, there was a prevalence of coffee isolates meanwhile the group D consisted of the almond isolate, solely.
publishDate 2007
dc.date.none.fl_str_mv 2007-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/report
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162007000500005
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162007000500005
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-90162007000500005
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.64 n.5 2007
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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