Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap

Detalhes bibliográficos
Autor(a) principal: Monego, Fernanda
Data de Publicação: 2008
Tipo de documento: Dissertação
Idioma: por
Título da fonte: Manancial - Repositório Digital da UFSM
Texto Completo: http://repositorio.ufsm.br/handle/1/10016
Resumo: This study evaluated molecular characteristic of Rhodococcus equi isolates obtained from horses and standardized by PCR multiplex assay, which amplifies the vap gene family (vapA, B, C, D, E, F, G e H). One hundred eighty Rhodococcus equi isolates from different sources: healthy horse s feces (112), soil (12), stalls (23) and clinical isolates (33) of horsebreeding farms, were studied. The technique was standardized and confirmed by sequencing of amplified vap gene family controls. Thirty-two (17.8%) R. equi isolates evaluated were positive for vapA gene and carried at least three another vap genes associated. All 147 isolates from equine feces, stalls and soil from horse-breeding farms did not demonstrate any virulence-associated proteins genes. Thirty-two (97.0%) out of 33 clinical equines isolates were positive to multiplex PCR assay for vap gene family and demonstrated six molecular profile, 100% with vapA, vapD and vapG genes, 86.6% vapF, 76,6% vapH, 43.3% vapC, 36.6% vapE and none vapB. The most frequent molecular profile was vap A, D, F, G and H present in 37.5% of strains. Morever, there was no molecular epidemiological pattern for R. equi isolates from each horse-breeding farm studied. Thus this technique allows the identification of eight vap genes family (vapA, B, C, D, E, F, G e H), it is a practical an efficient method of conducting clinical and epidemiological studies on R. equi isolates.
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spelling 2017-06-022017-06-022008-02-19MONEGO, Fernanda. Molecular characterization of Rhodococcus equi from foals by multiplex PCR for vap genes. 2008. 49 f. Dissertação (Mestrado em Medicina Veterinária) - Universidade Federal de Santa Maria, Santa Maria, 2008.http://repositorio.ufsm.br/handle/1/10016This study evaluated molecular characteristic of Rhodococcus equi isolates obtained from horses and standardized by PCR multiplex assay, which amplifies the vap gene family (vapA, B, C, D, E, F, G e H). One hundred eighty Rhodococcus equi isolates from different sources: healthy horse s feces (112), soil (12), stalls (23) and clinical isolates (33) of horsebreeding farms, were studied. The technique was standardized and confirmed by sequencing of amplified vap gene family controls. Thirty-two (17.8%) R. equi isolates evaluated were positive for vapA gene and carried at least three another vap genes associated. All 147 isolates from equine feces, stalls and soil from horse-breeding farms did not demonstrate any virulence-associated proteins genes. Thirty-two (97.0%) out of 33 clinical equines isolates were positive to multiplex PCR assay for vap gene family and demonstrated six molecular profile, 100% with vapA, vapD and vapG genes, 86.6% vapF, 76,6% vapH, 43.3% vapC, 36.6% vapE and none vapB. The most frequent molecular profile was vap A, D, F, G and H present in 37.5% of strains. Morever, there was no molecular epidemiological pattern for R. equi isolates from each horse-breeding farm studied. Thus this technique allows the identification of eight vap genes family (vapA, B, C, D, E, F, G e H), it is a practical an efficient method of conducting clinical and epidemiological studies on R. equi isolates.O presente estudo tem por objetivo a caracterização molecular de isolados de Rhodococcus equi de eqüinos pela padronização de uma técnica de PCR multiplex para detecção dos genes da família vap (vapA, B, C, D, E, F, G e H). Foram analisadas 180 amostras de Rhodococcus equi de diferentes origens: fezes (112), solo (12) instalações (23) e isolados clínicos (33). A técnica foi padronizada e confirmada pelo sequenciamento da cepa padrão de R. equi (ATCC 33701), e de uma amostra de paciente humano contendo o gene vapB. Trinta e dois (17,8%) foram positivos para vapA e carregavam no mínimo 4 genes vap associados. Os 147 isolados oriundos de fezes, instalações e sola não apresentavam genes vap. Trinta e dois (97.0%) dos isolados clinicos foram positivos na PCR multiplex e demonstraram seis padrões moleculares, 100% com vapA, vapD and vapG, 86.6% vapF, 76,6% vapH, 43.3% vapC, 36.6% vapE e nenhum com vapB. O perfil molecular mais freqüente foi vap A, D, F, G eH presente em 37.5% das cepas. foram obtidos, sendo que os genes vapA, vapD e vapG estavam presentes em todas as amostras. Não foi obtido nenhum padrão molecular para cada propriedade estudada. Esta nova técnica constitui-se um método prático e eficaz para condução de estudos clínicos e epidemiológicos, bem como, por relevar os aspectos moleculares da infecção.Coordenação de Aperfeiçoamento de Pessoal de Nível Superiorapplication/pdfporUniversidade Federal de Santa MariaPrograma de Pós-Graduação em Medicina VeterináriaUFSMBRMedicina VeterináriaRhodococcus equiVapPCR multiplexPotrosFezesRhodococcus equiVap genesPCR multiplexFoalsFecesCNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIACaracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vapMolecular characterization of Rhodococcus equi from foals by multiplex PCR for vap genesinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesisVargas, Agueda Palmira Castagna dehttp://lattes.cnpq.br/1383126157031968Ribeiro, Marcio Garciahttp://lattes.cnpq.br/2209124317273797Loreto, Elgion Lucio da Silvahttp://lattes.cnpq.br/6493669115018157http://lattes.cnpq.br/7197850876016537Monego, Fernanda5005000000074005003003005007561081c-bfab-4ea7-ace8-2bf6488cb0b592938a59-7941-4d6e-8af6-b54668a93934e67befc3-dd28-4638-890f-0a49e4182ccbab41f5b8-3dea-4caa-86ab-c37a1044a379info:eu-repo/semantics/openAccessreponame:Manancial - Repositório Digital da UFSMinstname:Universidade Federal de Santa Maria (UFSM)instacron:UFSMORIGINALFERNANDAMONEGO.pdfapplication/pdf239375http://repositorio.ufsm.br/bitstream/1/10016/1/FERNANDAMONEGO.pdffdc6c63a44bae74c615b641ba68b2b26MD51TEXTFERNANDAMONEGO.pdf.txtFERNANDAMONEGO.pdf.txtExtracted texttext/plain76236http://repositorio.ufsm.br/bitstream/1/10016/2/FERNANDAMONEGO.pdf.txt0eb3a1023c9d7be25d5ee75b0f937416MD52THUMBNAILFERNANDAMONEGO.pdf.jpgFERNANDAMONEGO.pdf.jpgIM Thumbnailimage/jpeg4943http://repositorio.ufsm.br/bitstream/1/10016/3/FERNANDAMONEGO.pdf.jpg7296ad134a825d28ff91a6016047784dMD531/100162022-03-15 14:29:48.21oai:repositorio.ufsm.br:1/10016Repositório Institucionalhttp://repositorio.ufsm.br/PUBhttp://repositorio.ufsm.br/oai/requestopendoar:39132022-03-15T17:29:48Manancial - Repositório Digital da UFSM - Universidade Federal de Santa Maria (UFSM)false
dc.title.por.fl_str_mv Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
dc.title.alternative.eng.fl_str_mv Molecular characterization of Rhodococcus equi from foals by multiplex PCR for vap genes
title Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
spellingShingle Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
Monego, Fernanda
Rhodococcus equi
Vap
PCR multiplex
Potros
Fezes
Rhodococcus equi
Vap genes
PCR multiplex
Foals
Feces
CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
title_short Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
title_full Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
title_fullStr Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
title_full_unstemmed Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
title_sort Caracterização molecular de Rhodococcus equi de potros pela PCR multiplex dos genes da família vap
author Monego, Fernanda
author_facet Monego, Fernanda
author_role author
dc.contributor.advisor1.fl_str_mv Vargas, Agueda Palmira Castagna de
dc.contributor.advisor1Lattes.fl_str_mv http://lattes.cnpq.br/1383126157031968
dc.contributor.referee1.fl_str_mv Ribeiro, Marcio Garcia
dc.contributor.referee1Lattes.fl_str_mv http://lattes.cnpq.br/2209124317273797
dc.contributor.referee2.fl_str_mv Loreto, Elgion Lucio da Silva
dc.contributor.referee2Lattes.fl_str_mv http://lattes.cnpq.br/6493669115018157
dc.contributor.authorLattes.fl_str_mv http://lattes.cnpq.br/7197850876016537
dc.contributor.author.fl_str_mv Monego, Fernanda
contributor_str_mv Vargas, Agueda Palmira Castagna de
Ribeiro, Marcio Garcia
Loreto, Elgion Lucio da Silva
dc.subject.por.fl_str_mv Rhodococcus equi
Vap
PCR multiplex
Potros
Fezes
topic Rhodococcus equi
Vap
PCR multiplex
Potros
Fezes
Rhodococcus equi
Vap genes
PCR multiplex
Foals
Feces
CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
dc.subject.eng.fl_str_mv Rhodococcus equi
Vap genes
PCR multiplex
Foals
Feces
dc.subject.cnpq.fl_str_mv CNPQ::CIENCIAS AGRARIAS::MEDICINA VETERINARIA
description This study evaluated molecular characteristic of Rhodococcus equi isolates obtained from horses and standardized by PCR multiplex assay, which amplifies the vap gene family (vapA, B, C, D, E, F, G e H). One hundred eighty Rhodococcus equi isolates from different sources: healthy horse s feces (112), soil (12), stalls (23) and clinical isolates (33) of horsebreeding farms, were studied. The technique was standardized and confirmed by sequencing of amplified vap gene family controls. Thirty-two (17.8%) R. equi isolates evaluated were positive for vapA gene and carried at least three another vap genes associated. All 147 isolates from equine feces, stalls and soil from horse-breeding farms did not demonstrate any virulence-associated proteins genes. Thirty-two (97.0%) out of 33 clinical equines isolates were positive to multiplex PCR assay for vap gene family and demonstrated six molecular profile, 100% with vapA, vapD and vapG genes, 86.6% vapF, 76,6% vapH, 43.3% vapC, 36.6% vapE and none vapB. The most frequent molecular profile was vap A, D, F, G and H present in 37.5% of strains. Morever, there was no molecular epidemiological pattern for R. equi isolates from each horse-breeding farm studied. Thus this technique allows the identification of eight vap genes family (vapA, B, C, D, E, F, G e H), it is a practical an efficient method of conducting clinical and epidemiological studies on R. equi isolates.
publishDate 2008
dc.date.issued.fl_str_mv 2008-02-19
dc.date.accessioned.fl_str_mv 2017-06-02
dc.date.available.fl_str_mv 2017-06-02
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/masterThesis
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dc.identifier.citation.fl_str_mv MONEGO, Fernanda. Molecular characterization of Rhodococcus equi from foals by multiplex PCR for vap genes. 2008. 49 f. Dissertação (Mestrado em Medicina Veterinária) - Universidade Federal de Santa Maria, Santa Maria, 2008.
dc.identifier.uri.fl_str_mv http://repositorio.ufsm.br/handle/1/10016
identifier_str_mv MONEGO, Fernanda. Molecular characterization of Rhodococcus equi from foals by multiplex PCR for vap genes. 2008. 49 f. Dissertação (Mestrado em Medicina Veterinária) - Universidade Federal de Santa Maria, Santa Maria, 2008.
url http://repositorio.ufsm.br/handle/1/10016
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