PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil

Detalhes bibliográficos
Autor(a) principal: Pradella,Gabriela Döwich
Data de Publicação: 2022
Outros Autores: Escobar,Taiane Acunha, Santos,Thália Pacheco dos, Vargas,Rammy Campos, Góss,Geórgia Camargo, Ferrareze,Patricia Aline Gröhs, Rosa e Silva,Lívia Kmetzsch, Zuravski,Luísa, Pereira,Karina Braccini, Duarte,Claudia Acosta, Lübeck,Irina
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Brasileira de Parasitologia Veterinária (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-29612022000300301
Resumo: Abstract The aim of this study was to characterize Leishmania spp. from canine and feline samples using Polymerase Chain Reaction (PCR)- Restriction Fragment Length Polymorphism (RFLP). It was conducted in the southern region of Brazil, located at border crossings to Argentina and Uruguay. Samples were collected from 116 dogs (Canis lupus familiaris) and 89 cats (Felis catus). The PCR was performed to screen for an LT1 fragment from kinetoplast DNA (kDNA) target gene, and positive samples were subjected to a second PCR for an internal transcribed spacers (ITS1) region from ribosomal DNA (rDNA) target. RFLP was performed using the Haemophilus aegyptius (HAE III) restriction endonuclease (Fermentas ®). Positive samples by PCR ITS1 were sequenced and deposited in NCBI GenBank, and a phylogenetic analysis was developed. We found that 12.9% (15/116) of the samples from dogs were positive. All the 89 cat samples were negative. Positive samples were tested against Leishmania reference strains presenting different patterns in PCR-RFLP, and these samples showed bands denoting similarity to the standard species of Leishmania infantum, proven through sequencing and phylogenetic analysis. The RFLP technique, alone, was shown to be feasible for practical application and confirmation of the involved Leishmania spp.
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spelling PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of BrazilCaninediagnosisfelineLeishmaniasismolecular biologyAbstract The aim of this study was to characterize Leishmania spp. from canine and feline samples using Polymerase Chain Reaction (PCR)- Restriction Fragment Length Polymorphism (RFLP). It was conducted in the southern region of Brazil, located at border crossings to Argentina and Uruguay. Samples were collected from 116 dogs (Canis lupus familiaris) and 89 cats (Felis catus). The PCR was performed to screen for an LT1 fragment from kinetoplast DNA (kDNA) target gene, and positive samples were subjected to a second PCR for an internal transcribed spacers (ITS1) region from ribosomal DNA (rDNA) target. RFLP was performed using the Haemophilus aegyptius (HAE III) restriction endonuclease (Fermentas ®). Positive samples by PCR ITS1 were sequenced and deposited in NCBI GenBank, and a phylogenetic analysis was developed. We found that 12.9% (15/116) of the samples from dogs were positive. All the 89 cat samples were negative. Positive samples were tested against Leishmania reference strains presenting different patterns in PCR-RFLP, and these samples showed bands denoting similarity to the standard species of Leishmania infantum, proven through sequencing and phylogenetic analysis. The RFLP technique, alone, was shown to be feasible for practical application and confirmation of the involved Leishmania spp.Colégio Brasileiro de Parasitologia Veterinária2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-29612022000300301Revista Brasileira de Parasitologia Veterinária v.31 n.3 2022reponame:Revista Brasileira de Parasitologia Veterinária (Online)instname:Colégio Brasileiro de Parasitologia Veterinária (CBPV)instacron:CBPV10.1590/s1984-29612022035info:eu-repo/semantics/openAccessPradella,Gabriela DöwichEscobar,Taiane AcunhaSantos,Thália Pacheco dosVargas,Rammy CamposGóss,Geórgia CamargoFerrareze,Patricia Aline GröhsRosa e Silva,Lívia KmetzschZuravski,LuísaPereira,Karina BracciniDuarte,Claudia AcostaLübeck,Irinaeng2022-07-15T00:00:00Zoai:scielo:S1984-29612022000300301Revistahttp://www.scielo.br/scielo.php?script=sci_serial&lng=pt&pid=1984-2961https://old.scielo.br/oai/scielo-oai.php||zacariascbpv@fcav.unesp.br1984-29610103-846Xopendoar:2022-07-15T00:00Revista Brasileira de Parasitologia Veterinária (Online) - Colégio Brasileiro de Parasitologia Veterinária (CBPV)false
dc.title.none.fl_str_mv PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
title PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
spellingShingle PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
Pradella,Gabriela Döwich
Canine
diagnosis
feline
Leishmaniasis
molecular biology
title_short PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
title_full PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
title_fullStr PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
title_full_unstemmed PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
title_sort PCR-RLFP characterization of Leishmania spp. in domestic animals from the south-western border of Brazil
author Pradella,Gabriela Döwich
author_facet Pradella,Gabriela Döwich
Escobar,Taiane Acunha
Santos,Thália Pacheco dos
Vargas,Rammy Campos
Góss,Geórgia Camargo
Ferrareze,Patricia Aline Gröhs
Rosa e Silva,Lívia Kmetzsch
Zuravski,Luísa
Pereira,Karina Braccini
Duarte,Claudia Acosta
Lübeck,Irina
author_role author
author2 Escobar,Taiane Acunha
Santos,Thália Pacheco dos
Vargas,Rammy Campos
Góss,Geórgia Camargo
Ferrareze,Patricia Aline Gröhs
Rosa e Silva,Lívia Kmetzsch
Zuravski,Luísa
Pereira,Karina Braccini
Duarte,Claudia Acosta
Lübeck,Irina
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Pradella,Gabriela Döwich
Escobar,Taiane Acunha
Santos,Thália Pacheco dos
Vargas,Rammy Campos
Góss,Geórgia Camargo
Ferrareze,Patricia Aline Gröhs
Rosa e Silva,Lívia Kmetzsch
Zuravski,Luísa
Pereira,Karina Braccini
Duarte,Claudia Acosta
Lübeck,Irina
dc.subject.por.fl_str_mv Canine
diagnosis
feline
Leishmaniasis
molecular biology
topic Canine
diagnosis
feline
Leishmaniasis
molecular biology
description Abstract The aim of this study was to characterize Leishmania spp. from canine and feline samples using Polymerase Chain Reaction (PCR)- Restriction Fragment Length Polymorphism (RFLP). It was conducted in the southern region of Brazil, located at border crossings to Argentina and Uruguay. Samples were collected from 116 dogs (Canis lupus familiaris) and 89 cats (Felis catus). The PCR was performed to screen for an LT1 fragment from kinetoplast DNA (kDNA) target gene, and positive samples were subjected to a second PCR for an internal transcribed spacers (ITS1) region from ribosomal DNA (rDNA) target. RFLP was performed using the Haemophilus aegyptius (HAE III) restriction endonuclease (Fermentas ®). Positive samples by PCR ITS1 were sequenced and deposited in NCBI GenBank, and a phylogenetic analysis was developed. We found that 12.9% (15/116) of the samples from dogs were positive. All the 89 cat samples were negative. Positive samples were tested against Leishmania reference strains presenting different patterns in PCR-RFLP, and these samples showed bands denoting similarity to the standard species of Leishmania infantum, proven through sequencing and phylogenetic analysis. The RFLP technique, alone, was shown to be feasible for practical application and confirmation of the involved Leishmania spp.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-29612022000300301
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-29612022000300301
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/s1984-29612022035
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Colégio Brasileiro de Parasitologia Veterinária
publisher.none.fl_str_mv Colégio Brasileiro de Parasitologia Veterinária
dc.source.none.fl_str_mv Revista Brasileira de Parasitologia Veterinária v.31 n.3 2022
reponame:Revista Brasileira de Parasitologia Veterinária (Online)
instname:Colégio Brasileiro de Parasitologia Veterinária (CBPV)
instacron:CBPV
instname_str Colégio Brasileiro de Parasitologia Veterinária (CBPV)
instacron_str CBPV
institution CBPV
reponame_str Revista Brasileira de Parasitologia Veterinária (Online)
collection Revista Brasileira de Parasitologia Veterinária (Online)
repository.name.fl_str_mv Revista Brasileira de Parasitologia Veterinária (Online) - Colégio Brasileiro de Parasitologia Veterinária (CBPV)
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