Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy.
Autor(a) principal: | |
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Data de Publicação: | 2015 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
Texto Completo: | http://www.alice.cnptia.embrapa.br/alice/handle/doc/1036767 |
Resumo: | Dehydrins (DHN) are proteins involved in plant adaptive responses to abiotic stresses, mainly dehydration. Several studies in perennial crops have linked bud dormancy progression, a process characterized by the inability to initiate growth from meristems under favorable conditions, with DHN gene expression. However, an in-depth characterization of DHNs during bud dormancy progression is still missing. An extensive in silico characterization of the apple DHN gene family was performed. Additionally, we used five different experiments that generated samples with different dormancy status, including genotypes with contrasting dormancy traits, to analyze how DHN genes are being regulated during bud dormancy progression in apple by real-time quantitative polymerase chain reaction (RT-qPCR). Duplication events took place in the diversification of apple DHN family. Additionally, MdDHN genes presented tissue- and bud dormant-specific expression patterns. Our results indicate that MdDHN genes are highly divergent in function, with overlapping levels, and that their expressions are fine-tuned by the environment during the dormancy process in apple. |
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Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy.Dehydrin gene familyAppleDormencia de gemaCold acclimationDuring dormancyMaçãFisiologia vegetalDormenciaDehydrins (DHN) are proteins involved in plant adaptive responses to abiotic stresses, mainly dehydration. Several studies in perennial crops have linked bud dormancy progression, a process characterized by the inability to initiate growth from meristems under favorable conditions, with DHN gene expression. However, an in-depth characterization of DHNs during bud dormancy progression is still missing. An extensive in silico characterization of the apple DHN gene family was performed. Additionally, we used five different experiments that generated samples with different dormancy status, including genotypes with contrasting dormancy traits, to analyze how DHN genes are being regulated during bud dormancy progression in apple by real-time quantitative polymerase chain reaction (RT-qPCR). Duplication events took place in the diversification of apple DHN family. Additionally, MdDHN genes presented tissue- and bud dormant-specific expression patterns. Our results indicate that MdDHN genes are highly divergent in function, with overlapping levels, and that their expressions are fine-tuned by the environment during the dormancy process in apple.Vítor da Silveira Falavigna, Universidade Federal do Rio Grande do Sul; Yohanna Evelyn Miotto; DIOGO DENARDI PORTO, CPATSA; Rafael Anzanello; HENRIQUE PESSOA DOS SANTOS, CNPUV; FLAVIO BELLO FIALHO, CNPUV; Márcia Margis-Pinheiro; Giancarlo Pasquali; LUIS FERNANDO REVERS, CNPUV.FALAVIGNA, V. da S.MIOTTO, Y. E.PORTO, D. D.ANZANELLO, R.SANTOS, H. P. dosFIALHO, F. B.MARGIS-PINHEIRO, M.PASQUALI, G.REVERS, L. F.2022-07-26T18:20:33Z2022-07-26T18:20:33Z2016-02-122015info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePhysiologia Plantarum, v. 155, n. 3, p. 315-329, 2015.http://www.alice.cnptia.embrapa.br/alice/handle/doc/103676710.1111/ppl.12338enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2022-07-26T18:20:41Zoai:www.alice.cnptia.embrapa.br:doc/1036767Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542022-07-26T18:20:41falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542022-07-26T18:20:41Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
title |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
spellingShingle |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. FALAVIGNA, V. da S. Dehydrin gene family Apple Dormencia de gema Cold acclimation During dormancy Maçã Fisiologia vegetal Dormencia |
title_short |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
title_full |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
title_fullStr |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
title_full_unstemmed |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
title_sort |
Functional diversification of the dehydrin gene family in apple and its contribution to cold acclimation during dormancy. |
author |
FALAVIGNA, V. da S. |
author_facet |
FALAVIGNA, V. da S. MIOTTO, Y. E. PORTO, D. D. ANZANELLO, R. SANTOS, H. P. dos FIALHO, F. B. MARGIS-PINHEIRO, M. PASQUALI, G. REVERS, L. F. |
author_role |
author |
author2 |
MIOTTO, Y. E. PORTO, D. D. ANZANELLO, R. SANTOS, H. P. dos FIALHO, F. B. MARGIS-PINHEIRO, M. PASQUALI, G. REVERS, L. F. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Vítor da Silveira Falavigna, Universidade Federal do Rio Grande do Sul; Yohanna Evelyn Miotto; DIOGO DENARDI PORTO, CPATSA; Rafael Anzanello; HENRIQUE PESSOA DOS SANTOS, CNPUV; FLAVIO BELLO FIALHO, CNPUV; Márcia Margis-Pinheiro; Giancarlo Pasquali; LUIS FERNANDO REVERS, CNPUV. |
dc.contributor.author.fl_str_mv |
FALAVIGNA, V. da S. MIOTTO, Y. E. PORTO, D. D. ANZANELLO, R. SANTOS, H. P. dos FIALHO, F. B. MARGIS-PINHEIRO, M. PASQUALI, G. REVERS, L. F. |
dc.subject.por.fl_str_mv |
Dehydrin gene family Apple Dormencia de gema Cold acclimation During dormancy Maçã Fisiologia vegetal Dormencia |
topic |
Dehydrin gene family Apple Dormencia de gema Cold acclimation During dormancy Maçã Fisiologia vegetal Dormencia |
description |
Dehydrins (DHN) are proteins involved in plant adaptive responses to abiotic stresses, mainly dehydration. Several studies in perennial crops have linked bud dormancy progression, a process characterized by the inability to initiate growth from meristems under favorable conditions, with DHN gene expression. However, an in-depth characterization of DHNs during bud dormancy progression is still missing. An extensive in silico characterization of the apple DHN gene family was performed. Additionally, we used five different experiments that generated samples with different dormancy status, including genotypes with contrasting dormancy traits, to analyze how DHN genes are being regulated during bud dormancy progression in apple by real-time quantitative polymerase chain reaction (RT-qPCR). Duplication events took place in the diversification of apple DHN family. Additionally, MdDHN genes presented tissue- and bud dormant-specific expression patterns. Our results indicate that MdDHN genes are highly divergent in function, with overlapping levels, and that their expressions are fine-tuned by the environment during the dormancy process in apple. |
publishDate |
2015 |
dc.date.none.fl_str_mv |
2015 2016-02-12 2022-07-26T18:20:33Z 2022-07-26T18:20:33Z |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/publishedVersion info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
Physiologia Plantarum, v. 155, n. 3, p. 315-329, 2015. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1036767 10.1111/ppl.12338 |
identifier_str_mv |
Physiologia Plantarum, v. 155, n. 3, p. 315-329, 2015. 10.1111/ppl.12338 |
url |
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1036767 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
collection |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) |
repository.name.fl_str_mv |
Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
cg-riaa@embrapa.br |
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1794503526767919104 |