New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato

Detalhes bibliográficos
Autor(a) principal: Cunha-Machado, Antônio Saulo
Data de Publicação: 2014
Outros Autores: Scarpassa, Vera Margarete
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional do INPA
Texto Completo: https://repositorio.inpa.gov.br/handle/1/14986
Resumo: Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP.
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spelling Cunha-Machado, Antônio SauloScarpassa, Vera Margarete2020-05-07T14:00:20Z2020-05-07T14:00:20Z2014https://repositorio.inpa.gov.br/handle/1/1498610.4238/2014.October.27.26Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP.Volume 13, Número 4, Pags. 8856-8861Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlleleAnopheles NuneztovariGene LibraryGene LocusGenetic VariabilityHeterozygosityInsect GeneticsMicrosatellite MarkerNonhumanNucleotide SequencePopulation Genetic StructureAnimalsAnophelesDna SequenceGene FrequencyGene Linkage DisequilibriumGene VectorPolymorphism, GeneticGeneticsGenotypeHumanMalariaMolecular GeneticsPolymerase Chain ReactionTransmissionAnopheles NuneztovariMicrosatellite DnaAllelesAnimalAnophelesGene FrequencyGenetic VectorsGenotypeHumansLinkage DisequilibriumMalariaMicrosatellite RepeatsMolecular Sequence DataPolymerase Chain ReactionPolymorphism, GeneticSequence Analysis, DnaNew microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu latoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf314158https://repositorio.inpa.gov.br/bitstream/1/14986/1/artigo-inpa.pdf8c061eccf4113662827eb4d7c6459f5eMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14986/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/149862020-07-14 10:30:30.16oai:repositorio:1/14986Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:30:30Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false
dc.title.en.fl_str_mv New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
title New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
spellingShingle New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
Cunha-Machado, Antônio Saulo
Allele
Anopheles Nuneztovari
Gene Library
Gene Locus
Genetic Variability
Heterozygosity
Insect Genetics
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Population Genetic Structure
Animals
Anopheles
Dna Sequence
Gene Frequency
Gene Linkage Disequilibrium
Gene Vector
Polymorphism, Genetic
Genetics
Genotype
Human
Malaria
Molecular Genetics
Polymerase Chain Reaction
Transmission
Anopheles Nuneztovari
Microsatellite Dna
Alleles
Animal
Anopheles
Gene Frequency
Genetic Vectors
Genotype
Humans
Linkage Disequilibrium
Malaria
Microsatellite Repeats
Molecular Sequence Data
Polymerase Chain Reaction
Polymorphism, Genetic
Sequence Analysis, Dna
title_short New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
title_full New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
title_fullStr New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
title_full_unstemmed New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
title_sort New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
author Cunha-Machado, Antônio Saulo
author_facet Cunha-Machado, Antônio Saulo
Scarpassa, Vera Margarete
author_role author
author2 Scarpassa, Vera Margarete
author2_role author
dc.contributor.author.fl_str_mv Cunha-Machado, Antônio Saulo
Scarpassa, Vera Margarete
dc.subject.eng.fl_str_mv Allele
Anopheles Nuneztovari
Gene Library
Gene Locus
Genetic Variability
Heterozygosity
Insect Genetics
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Population Genetic Structure
Animals
Anopheles
Dna Sequence
Gene Frequency
Gene Linkage Disequilibrium
Gene Vector
Polymorphism, Genetic
Genetics
Genotype
Human
Malaria
Molecular Genetics
Polymerase Chain Reaction
Transmission
Anopheles Nuneztovari
Microsatellite Dna
Alleles
Animal
Anopheles
Gene Frequency
Genetic Vectors
Genotype
Humans
Linkage Disequilibrium
Malaria
Microsatellite Repeats
Molecular Sequence Data
Polymerase Chain Reaction
Polymorphism, Genetic
Sequence Analysis, Dna
topic Allele
Anopheles Nuneztovari
Gene Library
Gene Locus
Genetic Variability
Heterozygosity
Insect Genetics
Microsatellite Marker
Nonhuman
Nucleotide Sequence
Population Genetic Structure
Animals
Anopheles
Dna Sequence
Gene Frequency
Gene Linkage Disequilibrium
Gene Vector
Polymorphism, Genetic
Genetics
Genotype
Human
Malaria
Molecular Genetics
Polymerase Chain Reaction
Transmission
Anopheles Nuneztovari
Microsatellite Dna
Alleles
Animal
Anopheles
Gene Frequency
Genetic Vectors
Genotype
Humans
Linkage Disequilibrium
Malaria
Microsatellite Repeats
Molecular Sequence Data
Polymerase Chain Reaction
Polymorphism, Genetic
Sequence Analysis, Dna
description Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP.
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2020-05-07T14:00:20Z
dc.date.available.fl_str_mv 2020-05-07T14:00:20Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://repositorio.inpa.gov.br/handle/1/14986
dc.identifier.doi.none.fl_str_mv 10.4238/2014.October.27.26
url https://repositorio.inpa.gov.br/handle/1/14986
identifier_str_mv 10.4238/2014.October.27.26
dc.language.iso.fl_str_mv eng
language eng
dc.relation.ispartof.pt_BR.fl_str_mv Volume 13, Número 4, Pags. 8856-8861
dc.rights.driver.fl_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Attribution-NonCommercial-NoDerivs 3.0 Brazil
http://creativecommons.org/licenses/by-nc-nd/3.0/br/
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv Genetics and Molecular Research
publisher.none.fl_str_mv Genetics and Molecular Research
dc.source.none.fl_str_mv reponame:Repositório Institucional do INPA
instname:Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron:INPA
instname_str Instituto Nacional de Pesquisas da Amazônia (INPA)
instacron_str INPA
institution INPA
reponame_str Repositório Institucional do INPA
collection Repositório Institucional do INPA
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