New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato
Autor(a) principal: | |
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Data de Publicação: | 2014 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional do INPA |
Texto Completo: | https://repositorio.inpa.gov.br/handle/1/14986 |
Resumo: | Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP. |
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Cunha-Machado, Antônio SauloScarpassa, Vera Margarete2020-05-07T14:00:20Z2020-05-07T14:00:20Z2014https://repositorio.inpa.gov.br/handle/1/1498610.4238/2014.October.27.26Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP.Volume 13, Número 4, Pags. 8856-8861Attribution-NonCommercial-NoDerivs 3.0 Brazilhttp://creativecommons.org/licenses/by-nc-nd/3.0/br/info:eu-repo/semantics/openAccessAlleleAnopheles NuneztovariGene LibraryGene LocusGenetic VariabilityHeterozygosityInsect GeneticsMicrosatellite MarkerNonhumanNucleotide SequencePopulation Genetic StructureAnimalsAnophelesDna SequenceGene FrequencyGene Linkage DisequilibriumGene VectorPolymorphism, GeneticGeneticsGenotypeHumanMalariaMolecular GeneticsPolymerase Chain ReactionTransmissionAnopheles NuneztovariMicrosatellite DnaAllelesAnimalAnophelesGene FrequencyGenetic VectorsGenotypeHumansLinkage DisequilibriumMalariaMicrosatellite RepeatsMolecular Sequence DataPolymerase Chain ReactionPolymorphism, GeneticSequence Analysis, DnaNew microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu latoinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Researchengreponame:Repositório Institucional do INPAinstname:Instituto Nacional de Pesquisas da Amazônia (INPA)instacron:INPAORIGINALartigo-inpa.pdfapplication/pdf314158https://repositorio.inpa.gov.br/bitstream/1/14986/1/artigo-inpa.pdf8c061eccf4113662827eb4d7c6459f5eMD51CC-LICENSElicense_rdfapplication/octet-stream914https://repositorio.inpa.gov.br/bitstream/1/14986/2/license_rdf4d2950bda3d176f570a9f8b328dfbbefMD521/149862020-07-14 10:30:30.16oai:repositorio:1/14986Repositório de PublicaçõesPUBhttps://repositorio.inpa.gov.br/oai/requestopendoar:2020-07-14T14:30:30Repositório Institucional do INPA - Instituto Nacional de Pesquisas da Amazônia (INPA)false |
dc.title.en.fl_str_mv |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
title |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
spellingShingle |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato Cunha-Machado, Antônio Saulo Allele Anopheles Nuneztovari Gene Library Gene Locus Genetic Variability Heterozygosity Insect Genetics Microsatellite Marker Nonhuman Nucleotide Sequence Population Genetic Structure Animals Anopheles Dna Sequence Gene Frequency Gene Linkage Disequilibrium Gene Vector Polymorphism, Genetic Genetics Genotype Human Malaria Molecular Genetics Polymerase Chain Reaction Transmission Anopheles Nuneztovari Microsatellite Dna Alleles Animal Anopheles Gene Frequency Genetic Vectors Genotype Humans Linkage Disequilibrium Malaria Microsatellite Repeats Molecular Sequence Data Polymerase Chain Reaction Polymorphism, Genetic Sequence Analysis, Dna |
title_short |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
title_full |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
title_fullStr |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
title_full_unstemmed |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
title_sort |
New microsatellite markers for the neotropical malaria vector Anopheles nuneztovari sensu lato |
author |
Cunha-Machado, Antônio Saulo |
author_facet |
Cunha-Machado, Antônio Saulo Scarpassa, Vera Margarete |
author_role |
author |
author2 |
Scarpassa, Vera Margarete |
author2_role |
author |
dc.contributor.author.fl_str_mv |
Cunha-Machado, Antônio Saulo Scarpassa, Vera Margarete |
dc.subject.eng.fl_str_mv |
Allele Anopheles Nuneztovari Gene Library Gene Locus Genetic Variability Heterozygosity Insect Genetics Microsatellite Marker Nonhuman Nucleotide Sequence Population Genetic Structure Animals Anopheles Dna Sequence Gene Frequency Gene Linkage Disequilibrium Gene Vector Polymorphism, Genetic Genetics Genotype Human Malaria Molecular Genetics Polymerase Chain Reaction Transmission Anopheles Nuneztovari Microsatellite Dna Alleles Animal Anopheles Gene Frequency Genetic Vectors Genotype Humans Linkage Disequilibrium Malaria Microsatellite Repeats Molecular Sequence Data Polymerase Chain Reaction Polymorphism, Genetic Sequence Analysis, Dna |
topic |
Allele Anopheles Nuneztovari Gene Library Gene Locus Genetic Variability Heterozygosity Insect Genetics Microsatellite Marker Nonhuman Nucleotide Sequence Population Genetic Structure Animals Anopheles Dna Sequence Gene Frequency Gene Linkage Disequilibrium Gene Vector Polymorphism, Genetic Genetics Genotype Human Malaria Molecular Genetics Polymerase Chain Reaction Transmission Anopheles Nuneztovari Microsatellite Dna Alleles Animal Anopheles Gene Frequency Genetic Vectors Genotype Humans Linkage Disequilibrium Malaria Microsatellite Repeats Molecular Sequence Data Polymerase Chain Reaction Polymorphism, Genetic Sequence Analysis, Dna |
description |
Anopheles nuneztovari sensu lato consists of cryptic species and genetic lineages, one of which is an important human malaria vector in the northern part of South America. Population structure and evolutionary genetics studies may help in the definition and delimitation of the species and lineages within this species complex, which is relevant information for organizations involved in malaria control efforts. In this study, 10 new microsatellite markers were isolated from 2 repeat-enriched genomic libraries of A. nuneztovari s.l. and were characterized in 37-48 mosquitoes of this species. All loci were highly polymorphic and encompassed 5-25 alleles per locus. The observed (HO) and expected (HE) heterozygosities ranged from 0.354 to 0.866 and from 0.613 to 0.932, respectively. Six of the 10 new loci showed significant deviations from the Hardy-Weinberg equilibrium, and no linkage disequilibrium was detected. The loci described in this study were more polymorphic than the 18 previously characterized loci and appear to be promising markers for use in investigating the fine-scale population genetic structure and the boundaries of the cryptic species and lineages within the A. nuneztovari complex. © FUNPEC-RP. |
publishDate |
2014 |
dc.date.issued.fl_str_mv |
2014 |
dc.date.accessioned.fl_str_mv |
2020-05-07T14:00:20Z |
dc.date.available.fl_str_mv |
2020-05-07T14:00:20Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://repositorio.inpa.gov.br/handle/1/14986 |
dc.identifier.doi.none.fl_str_mv |
10.4238/2014.October.27.26 |
url |
https://repositorio.inpa.gov.br/handle/1/14986 |
identifier_str_mv |
10.4238/2014.October.27.26 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.ispartof.pt_BR.fl_str_mv |
Volume 13, Número 4, Pags. 8856-8861 |
dc.rights.driver.fl_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ info:eu-repo/semantics/openAccess |
rights_invalid_str_mv |
Attribution-NonCommercial-NoDerivs 3.0 Brazil http://creativecommons.org/licenses/by-nc-nd/3.0/br/ |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Genetics and Molecular Research |
publisher.none.fl_str_mv |
Genetics and Molecular Research |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional do INPA instname:Instituto Nacional de Pesquisas da Amazônia (INPA) instacron:INPA |
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Instituto Nacional de Pesquisas da Amazônia (INPA) |
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INPA |
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INPA |
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Repositório Institucional do INPA |
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Repositório Institucional do INPA |
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