Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts

Detalhes bibliográficos
Autor(a) principal: Laíns, Inês
Data de Publicação: 2019
Outros Autores: Chung, Wonil, Kelly, Rachel S., Gil, João, Marques, Marco, Barreto, Patrícia, Murta, Joaquim N., Kim, Ivana K., Vavvas, Demetrios G., Miller, John B., Silva, Rufino, Lasky-Su, Jessica, Liang, Liming, Miller, Joan W., Husain, Deeba
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10316/107155
https://doi.org/10.3390/metabo9070127
Resumo: The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (n = 196) and Coimbra, Portugal (n = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) q-value: 4.1 × 10-2-1.8 × 10-5), and 67 across disease stages (FDR q-value: 4.5 × 10-2-1.7 × 10-4). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (p-value ≤ 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition.
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spelling Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohortsage-related macular degenerationmass spectrometrymetabolomicsThe pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (n = 196) and Coimbra, Portugal (n = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) q-value: 4.1 × 10-2-1.8 × 10-5), and 67 across disease stages (FDR q-value: 4.5 × 10-2-1.7 × 10-4). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (p-value ≤ 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition.MDPI2019-07-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://hdl.handle.net/10316/107155http://hdl.handle.net/10316/107155https://doi.org/10.3390/metabo9070127eng2218-1989Laíns, InêsChung, WonilKelly, Rachel S.Gil, JoãoMarques, MarcoBarreto, PatríciaMurta, Joaquim N.Kim, Ivana K.Vavvas, Demetrios G.Miller, John B.Silva, RufinoLasky-Su, JessicaLiang, LimingMiller, Joan W.Husain, Deebainfo:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-06-12T09:52:07Zoai:estudogeral.uc.pt:10316/107155Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T21:23:31.047135Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
spellingShingle Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
Laíns, Inês
age-related macular degeneration
mass spectrometry
metabolomics
title_short Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_full Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_fullStr Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_full_unstemmed Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
title_sort Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts
author Laíns, Inês
author_facet Laíns, Inês
Chung, Wonil
Kelly, Rachel S.
Gil, João
Marques, Marco
Barreto, Patrícia
Murta, Joaquim N.
Kim, Ivana K.
Vavvas, Demetrios G.
Miller, John B.
Silva, Rufino
Lasky-Su, Jessica
Liang, Liming
Miller, Joan W.
Husain, Deeba
author_role author
author2 Chung, Wonil
Kelly, Rachel S.
Gil, João
Marques, Marco
Barreto, Patrícia
Murta, Joaquim N.
Kim, Ivana K.
Vavvas, Demetrios G.
Miller, John B.
Silva, Rufino
Lasky-Su, Jessica
Liang, Liming
Miller, Joan W.
Husain, Deeba
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Laíns, Inês
Chung, Wonil
Kelly, Rachel S.
Gil, João
Marques, Marco
Barreto, Patrícia
Murta, Joaquim N.
Kim, Ivana K.
Vavvas, Demetrios G.
Miller, John B.
Silva, Rufino
Lasky-Su, Jessica
Liang, Liming
Miller, Joan W.
Husain, Deeba
dc.subject.por.fl_str_mv age-related macular degeneration
mass spectrometry
metabolomics
topic age-related macular degeneration
mass spectrometry
metabolomics
description The pathogenesis of age-related macular degeneration (AMD), a leading cause of blindness worldwide, remains only partially understood. This has led to the current lack of accessible and reliable biofluid biomarkers for diagnosis and prognosis, and absence of treatments for dry AMD. This study aimed to assess the plasma metabolomic profiles of AMD and its severity stages with the ultimate goal of contributing to addressing these needs. We recruited two cohorts: Boston, United States (n = 196) and Coimbra, Portugal (n = 295). Fasting blood samples were analyzed using ultra-high performance liquid chromatography mass spectrometry. For each cohort, we compared plasma metabolites of AMD patients versus controls (logistic regression), and across disease stages (permutation-based cumulative logistic regression considering both eyes). Meta-analyses were then used to combine results from the two cohorts. Our results revealed that 28 metabolites differed significantly between AMD patients versus controls (false discovery rate (FDR) q-value: 4.1 × 10-2-1.8 × 10-5), and 67 across disease stages (FDR q-value: 4.5 × 10-2-1.7 × 10-4). Pathway analysis showed significant enrichment of glycerophospholipid, purine, taurine and hypotaurine, and nitrogen metabolism (p-value ≤ 0.04). In conclusion, our findings support that AMD patients present distinct plasma metabolomic profiles, which vary with disease severity. This work contributes to the understanding of AMD pathophysiology, and can be the basis of future biomarkers and precision medicine for this blinding condition.
publishDate 2019
dc.date.none.fl_str_mv 2019-07-02
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/10316/107155
http://hdl.handle.net/10316/107155
https://doi.org/10.3390/metabo9070127
url http://hdl.handle.net/10316/107155
https://doi.org/10.3390/metabo9070127
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 2218-1989
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv MDPI
publisher.none.fl_str_mv MDPI
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
instacron:RCAAP
instname_str Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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reponame_str Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
repository.name.fl_str_mv Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informação
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