Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry

Detalhes bibliográficos
Autor(a) principal: Santos, C.
Data de Publicação: 2010
Outros Autores: Paterson, R. R. M., Venâncio, Armando, Lima, Nelson
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/1822/10212
Resumo: Matrix-assisted laser desorption ⁄ ionization time-of-flight intact cell mass spectrometry (MALDI-TOF ICMS) is coming of age for the identification and characterization of fungi. The procedure has been used extensively with bacteria. UV-absorbing matrices function as energy mediators that transfer the absorbed photoenergy from an irradiation source to the surrounding sample molecules, resulting in minimum fragmentation. A surprisingly high number of fungal groups have been studied: (i) the terverticillate penicillia, (ii) aflatoxigenic, black and other aspergilli, (iii) Fusarium, (iv) Trichoderma, (iv) wood rotting fungi (e.g. Serpula lacrymans) and (v) dermatophytes. The technique has been suggested for optimizing quality control of fungal Chinese medicines (e.g. Cordyceps). MALDI-TOF ICMS offers advantages over PCR. The method is now used in taxonomic assessments (e.g. Trichoderma) as distinct from only strain characterization. Low and high molecular mass natural products (e.g. peptaibols) can be analysed. The procedure is rapid and requires minimal pretreatment. However, issues of reproducibility need to be addressed further in terms of strains of species tested and between run variability. More studies into the capabilities of MALDI-TOF ICMS to identify fungi are required.
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spelling Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometryFilamentous fungiFungal identificationMALDI-TOF ICMSRapid techniquesSpectral analysisScience & TechnologyMatrix-assisted laser desorption ⁄ ionization time-of-flight intact cell mass spectrometry (MALDI-TOF ICMS) is coming of age for the identification and characterization of fungi. The procedure has been used extensively with bacteria. UV-absorbing matrices function as energy mediators that transfer the absorbed photoenergy from an irradiation source to the surrounding sample molecules, resulting in minimum fragmentation. A surprisingly high number of fungal groups have been studied: (i) the terverticillate penicillia, (ii) aflatoxigenic, black and other aspergilli, (iii) Fusarium, (iv) Trichoderma, (iv) wood rotting fungi (e.g. Serpula lacrymans) and (v) dermatophytes. The technique has been suggested for optimizing quality control of fungal Chinese medicines (e.g. Cordyceps). MALDI-TOF ICMS offers advantages over PCR. The method is now used in taxonomic assessments (e.g. Trichoderma) as distinct from only strain characterization. Low and high molecular mass natural products (e.g. peptaibols) can be analysed. The procedure is rapid and requires minimal pretreatment. However, issues of reproducibility need to be addressed further in terms of strains of species tested and between run variability. More studies into the capabilities of MALDI-TOF ICMS to identify fungi are required.R.R.M. Paterson is grateful for FCT-Portugal Grant (SFRH/BPD/34879/2007) and IOI Professorial Chair, Malaysia where some of this review was first revised. C. Santos acknowledges FACEPE/CNPq-Brazil financial support. N. Lima appreciates the stay in the Biochemistry Department of UFPE-Brazil as Visiting Full Professor where this review was drafted. C. Santos and N. Lima acknowledge Laboratorio de Imunopatologia Keizo Asami (LIKA/UFPE) for the consent and support given to use their MALDI-TOF MS equipment.Wiley-BlackwellUniversidade do MinhoSantos, C.Paterson, R. R. M.Venâncio, ArmandoLima, Nelson2010-022010-02-01T00:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/1822/10212eng"Journal of Applied Microbiology". ISSN 1364-5072. 108:2 (Febr. 2010) 375-385.1364-507210.1111/j.1365-2672.2009.04448.x19659699info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2023-07-21T12:14:24Zoai:repositorium.sdum.uminho.pt:1822/10212Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-19T19:06:42.725719Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
title Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
spellingShingle Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
Santos, C.
Filamentous fungi
Fungal identification
MALDI-TOF ICMS
Rapid techniques
Spectral analysis
Science & Technology
title_short Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
title_full Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
title_fullStr Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
title_full_unstemmed Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
title_sort Filamentous fungal characterizations by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
author Santos, C.
author_facet Santos, C.
Paterson, R. R. M.
Venâncio, Armando
Lima, Nelson
author_role author
author2 Paterson, R. R. M.
Venâncio, Armando
Lima, Nelson
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade do Minho
dc.contributor.author.fl_str_mv Santos, C.
Paterson, R. R. M.
Venâncio, Armando
Lima, Nelson
dc.subject.por.fl_str_mv Filamentous fungi
Fungal identification
MALDI-TOF ICMS
Rapid techniques
Spectral analysis
Science & Technology
topic Filamentous fungi
Fungal identification
MALDI-TOF ICMS
Rapid techniques
Spectral analysis
Science & Technology
description Matrix-assisted laser desorption ⁄ ionization time-of-flight intact cell mass spectrometry (MALDI-TOF ICMS) is coming of age for the identification and characterization of fungi. The procedure has been used extensively with bacteria. UV-absorbing matrices function as energy mediators that transfer the absorbed photoenergy from an irradiation source to the surrounding sample molecules, resulting in minimum fragmentation. A surprisingly high number of fungal groups have been studied: (i) the terverticillate penicillia, (ii) aflatoxigenic, black and other aspergilli, (iii) Fusarium, (iv) Trichoderma, (iv) wood rotting fungi (e.g. Serpula lacrymans) and (v) dermatophytes. The technique has been suggested for optimizing quality control of fungal Chinese medicines (e.g. Cordyceps). MALDI-TOF ICMS offers advantages over PCR. The method is now used in taxonomic assessments (e.g. Trichoderma) as distinct from only strain characterization. Low and high molecular mass natural products (e.g. peptaibols) can be analysed. The procedure is rapid and requires minimal pretreatment. However, issues of reproducibility need to be addressed further in terms of strains of species tested and between run variability. More studies into the capabilities of MALDI-TOF ICMS to identify fungi are required.
publishDate 2010
dc.date.none.fl_str_mv 2010-02
2010-02-01T00:00:00Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://hdl.handle.net/1822/10212
url http://hdl.handle.net/1822/10212
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv "Journal of Applied Microbiology". ISSN 1364-5072. 108:2 (Febr. 2010) 375-385.
1364-5072
10.1111/j.1365-2672.2009.04448.x
19659699
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Wiley-Blackwell
publisher.none.fl_str_mv Wiley-Blackwell
dc.source.none.fl_str_mv reponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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