Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation

Detalhes bibliográficos
Autor(a) principal: Baptista, I.
Data de Publicação: 2011
Outros Autores: Santos, A. L., Cunha, A., Gomes, N. C. M., Almeida, A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
Texto Completo: http://hdl.handle.net/10773/11114
Resumo: Heterotrophic bacterioplankton play a key role in the transfer of organic carbon from the dissolved pool into planktonic trophic webs. The accurate measurement of bacterial biomass production (BBP) is crucial for the establishment of carbon budgets in aquatic systems. Estimation of BBP from the incorporation of radiolabelled leucine into bacterial proteins requires the use of empirical, semitheoretical or theoretical conversion factors (CFs). In this study, our estimate of the BBP for the estuarine system of Ria de Aveiro was higher when we used empirical and semitheoretical CFs than when we used theoretical ones. Empirical CFs ranged between 9.26 and 29.81 kg C mol–1 in the marine zone and between 4.25 and 16.88 kg C mol–1 in the brackish zone. Semitheoretical CFs ranged from 5.06 to 9.49 kg C mol–1 in the marine zone and from 5.28 to 9.34 kg C mol–1 in the brackish zone. During experiments to determine empirical CFs, the structure of the bacterial community was also analyzed. Sample preparation and the addition of leucine altered the structure of the bacterial community, and this probably affected the determination of the empirical CFs. The results show that, besides the effect of the use of an inadequate CF, the estimates of BBP can be biased in a system-specific way by the alteration of the structure of the bacterial community as a result of sample manipulation (i.e. filtration/dilution, incubation, and addition of non-radiolabelled and radiolabelled leucine).
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spelling Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubationHeterotrophic bacterioplanktonLeucine incorporationIsotope dilutionConversion factorsBacterial communitiesEstuaryHeterotrophic bacterioplankton play a key role in the transfer of organic carbon from the dissolved pool into planktonic trophic webs. The accurate measurement of bacterial biomass production (BBP) is crucial for the establishment of carbon budgets in aquatic systems. Estimation of BBP from the incorporation of radiolabelled leucine into bacterial proteins requires the use of empirical, semitheoretical or theoretical conversion factors (CFs). In this study, our estimate of the BBP for the estuarine system of Ria de Aveiro was higher when we used empirical and semitheoretical CFs than when we used theoretical ones. Empirical CFs ranged between 9.26 and 29.81 kg C mol–1 in the marine zone and between 4.25 and 16.88 kg C mol–1 in the brackish zone. Semitheoretical CFs ranged from 5.06 to 9.49 kg C mol–1 in the marine zone and from 5.28 to 9.34 kg C mol–1 in the brackish zone. During experiments to determine empirical CFs, the structure of the bacterial community was also analyzed. Sample preparation and the addition of leucine altered the structure of the bacterial community, and this probably affected the determination of the empirical CFs. The results show that, besides the effect of the use of an inadequate CF, the estimates of BBP can be biased in a system-specific way by the alteration of the structure of the bacterial community as a result of sample manipulation (i.e. filtration/dilution, incubation, and addition of non-radiolabelled and radiolabelled leucine).Inter Research2018-07-20T14:00:41Z2011-02-08T00:00:00Z2011-02-082015-02-08T14:00:00Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://hdl.handle.net/10773/11114eng0948-305510.3354/ame01472Baptista, I.Santos, A. L.Cunha, A.Gomes, N. C. M.Almeida, A.info:eu-repo/semantics/openAccessreponame:Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)instname:Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãoinstacron:RCAAP2024-02-22T11:19:10Zoai:ria.ua.pt:10773/11114Portal AgregadorONGhttps://www.rcaap.pt/oai/openaireopendoar:71602024-03-20T02:47:21.457564Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos) - Agência para a Sociedade do Conhecimento (UMIC) - FCT - Sociedade da Informaçãofalse
dc.title.none.fl_str_mv Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
title Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
spellingShingle Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
Baptista, I.
Heterotrophic bacterioplankton
Leucine incorporation
Isotope dilution
Conversion factors
Bacterial communities
Estuary
title_short Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
title_full Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
title_fullStr Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
title_full_unstemmed Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
title_sort Bacterial biomass production in an estuarine system: high variability of leucine conversion factors and changes in bacterial community structure during incubation
author Baptista, I.
author_facet Baptista, I.
Santos, A. L.
Cunha, A.
Gomes, N. C. M.
Almeida, A.
author_role author
author2 Santos, A. L.
Cunha, A.
Gomes, N. C. M.
Almeida, A.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Baptista, I.
Santos, A. L.
Cunha, A.
Gomes, N. C. M.
Almeida, A.
dc.subject.por.fl_str_mv Heterotrophic bacterioplankton
Leucine incorporation
Isotope dilution
Conversion factors
Bacterial communities
Estuary
topic Heterotrophic bacterioplankton
Leucine incorporation
Isotope dilution
Conversion factors
Bacterial communities
Estuary
description Heterotrophic bacterioplankton play a key role in the transfer of organic carbon from the dissolved pool into planktonic trophic webs. The accurate measurement of bacterial biomass production (BBP) is crucial for the establishment of carbon budgets in aquatic systems. Estimation of BBP from the incorporation of radiolabelled leucine into bacterial proteins requires the use of empirical, semitheoretical or theoretical conversion factors (CFs). In this study, our estimate of the BBP for the estuarine system of Ria de Aveiro was higher when we used empirical and semitheoretical CFs than when we used theoretical ones. Empirical CFs ranged between 9.26 and 29.81 kg C mol–1 in the marine zone and between 4.25 and 16.88 kg C mol–1 in the brackish zone. Semitheoretical CFs ranged from 5.06 to 9.49 kg C mol–1 in the marine zone and from 5.28 to 9.34 kg C mol–1 in the brackish zone. During experiments to determine empirical CFs, the structure of the bacterial community was also analyzed. Sample preparation and the addition of leucine altered the structure of the bacterial community, and this probably affected the determination of the empirical CFs. The results show that, besides the effect of the use of an inadequate CF, the estimates of BBP can be biased in a system-specific way by the alteration of the structure of the bacterial community as a result of sample manipulation (i.e. filtration/dilution, incubation, and addition of non-radiolabelled and radiolabelled leucine).
publishDate 2011
dc.date.none.fl_str_mv 2011-02-08T00:00:00Z
2011-02-08
2015-02-08T14:00:00Z
2018-07-20T14:00:41Z
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 0948-3055
10.3354/ame01472
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collection Repositório Científico de Acesso Aberto de Portugal (Repositórios Cientìficos)
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