Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
Autor(a) principal: | |
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Data de Publicação: | 2005 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Genetics and Molecular Biology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017 |
Resumo: | Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus. |
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Genetics and Molecular Biology |
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Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalyptEucalyptusboronxylem loadingExpressed Sequence Tag (EST)BOR1Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.Sociedade Brasileira de Genética2005-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017Genetics and Molecular Biology v.28 n.3 suppl.0 2005reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572005000400017info:eu-repo/semantics/openAccessDomingues,Douglas SilvaLeite,Susi Meire MaximinoFarro,Ana Paula CazertaCoscrato,Virgínia EliasMori,Edson SeizoFurtado,Edson LuizWilcken,Carlos FredericoVelini,Edivaldo DominguesGuerrini,Iraë AmaralMaia,Ivan GodoyMarino,Celso Luiseng2006-01-04T00:00:00Zoai:scielo:S1415-47572005000400017Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-01-04T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false |
dc.title.none.fl_str_mv |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
spellingShingle |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt Domingues,Douglas Silva Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
title_short |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_full |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_fullStr |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_full_unstemmed |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_sort |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
author |
Domingues,Douglas Silva |
author_facet |
Domingues,Douglas Silva Leite,Susi Meire Maximino Farro,Ana Paula Cazerta Coscrato,Virgínia Elias Mori,Edson Seizo Furtado,Edson Luiz Wilcken,Carlos Frederico Velini,Edivaldo Domingues Guerrini,Iraë Amaral Maia,Ivan Godoy Marino,Celso Luis |
author_role |
author |
author2 |
Leite,Susi Meire Maximino Farro,Ana Paula Cazerta Coscrato,Virgínia Elias Mori,Edson Seizo Furtado,Edson Luiz Wilcken,Carlos Frederico Velini,Edivaldo Domingues Guerrini,Iraë Amaral Maia,Ivan Godoy Marino,Celso Luis |
author2_role |
author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Domingues,Douglas Silva Leite,Susi Meire Maximino Farro,Ana Paula Cazerta Coscrato,Virgínia Elias Mori,Edson Seizo Furtado,Edson Luiz Wilcken,Carlos Frederico Velini,Edivaldo Domingues Guerrini,Iraë Amaral Maia,Ivan Godoy Marino,Celso Luis |
dc.subject.por.fl_str_mv |
Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
topic |
Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
description |
Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus. |
publishDate |
2005 |
dc.date.none.fl_str_mv |
2005-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1415-47572005000400017 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
Genetics and Molecular Biology v.28 n.3 suppl.0 2005 reponame:Genetics and Molecular Biology instname:Sociedade Brasileira de Genética (SBG) instacron:SBG |
instname_str |
Sociedade Brasileira de Genética (SBG) |
instacron_str |
SBG |
institution |
SBG |
reponame_str |
Genetics and Molecular Biology |
collection |
Genetics and Molecular Biology |
repository.name.fl_str_mv |
Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG) |
repository.mail.fl_str_mv |
||editor@gmb.org.br |
_version_ |
1752122379799101440 |