Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt

Detalhes bibliográficos
Autor(a) principal: Domingues,Douglas Silva
Data de Publicação: 2005
Outros Autores: Leite,Susi Meire Maximino, Farro,Ana Paula Cazerta, Coscrato,Virgínia Elias, Mori,Edson Seizo, Furtado,Edson Luiz, Wilcken,Carlos Frederico, Velini,Edivaldo Domingues, Guerrini,Iraë Amaral, Maia,Ivan Godoy, Marino,Celso Luis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Genetics and Molecular Biology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017
Resumo: Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.
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spelling Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalyptEucalyptusboronxylem loadingExpressed Sequence Tag (EST)BOR1Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.Sociedade Brasileira de Genética2005-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017Genetics and Molecular Biology v.28 n.3 suppl.0 2005reponame:Genetics and Molecular Biologyinstname:Sociedade Brasileira de Genética (SBG)instacron:SBG10.1590/S1415-47572005000400017info:eu-repo/semantics/openAccessDomingues,Douglas SilvaLeite,Susi Meire MaximinoFarro,Ana Paula CazertaCoscrato,Virgínia EliasMori,Edson SeizoFurtado,Edson LuizWilcken,Carlos FredericoVelini,Edivaldo DominguesGuerrini,Iraë AmaralMaia,Ivan GodoyMarino,Celso Luiseng2006-01-04T00:00:00Zoai:scielo:S1415-47572005000400017Revistahttp://www.gmb.org.br/ONGhttps://old.scielo.br/oai/scielo-oai.php||editor@gmb.org.br1678-46851415-4757opendoar:2006-01-04T00:00Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)false
dc.title.none.fl_str_mv Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
spellingShingle Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
Domingues,Douglas Silva
Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
title_short Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_full Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_fullStr Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_full_unstemmed Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_sort Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
author Domingues,Douglas Silva
author_facet Domingues,Douglas Silva
Leite,Susi Meire Maximino
Farro,Ana Paula Cazerta
Coscrato,Virgínia Elias
Mori,Edson Seizo
Furtado,Edson Luiz
Wilcken,Carlos Frederico
Velini,Edivaldo Domingues
Guerrini,Iraë Amaral
Maia,Ivan Godoy
Marino,Celso Luis
author_role author
author2 Leite,Susi Meire Maximino
Farro,Ana Paula Cazerta
Coscrato,Virgínia Elias
Mori,Edson Seizo
Furtado,Edson Luiz
Wilcken,Carlos Frederico
Velini,Edivaldo Domingues
Guerrini,Iraë Amaral
Maia,Ivan Godoy
Marino,Celso Luis
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Domingues,Douglas Silva
Leite,Susi Meire Maximino
Farro,Ana Paula Cazerta
Coscrato,Virgínia Elias
Mori,Edson Seizo
Furtado,Edson Luiz
Wilcken,Carlos Frederico
Velini,Edivaldo Domingues
Guerrini,Iraë Amaral
Maia,Ivan Godoy
Marino,Celso Luis
dc.subject.por.fl_str_mv Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
topic Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
description Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.
publishDate 2005
dc.date.none.fl_str_mv 2005-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000400017
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1415-47572005000400017
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv Genetics and Molecular Biology v.28 n.3 suppl.0 2005
reponame:Genetics and Molecular Biology
instname:Sociedade Brasileira de Genética (SBG)
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instname_str Sociedade Brasileira de Genética (SBG)
instacron_str SBG
institution SBG
reponame_str Genetics and Molecular Biology
collection Genetics and Molecular Biology
repository.name.fl_str_mv Genetics and Molecular Biology - Sociedade Brasileira de Genética (SBG)
repository.mail.fl_str_mv ||editor@gmb.org.br
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