Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt

Detalhes bibliográficos
Autor(a) principal: Domingues, Douglas Silva [UNESP]
Data de Publicação: 2005
Outros Autores: Leite, Susi Meire Maximino [UNESP], Farro, Ana Paula Cazerta [UNESP], Coscrato, Virgínia Elias [UNESP], Mori, Edson Seizo [UNESP], Furtado, Edson Luiz [UNESP], Wilcken, Carlos Frederico [UNESP], Velini, Edivaldo Domingues [UNESP], Guerrini, Iraê Amaral [UNESP], Maia, Ivan de Godoy [UNESP], Marino, Celso Luis [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S1415-47572005000400017
http://hdl.handle.net/11449/17960
Resumo: Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.
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spelling Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalyptEucalyptusboronxylem loadingExpressed Sequence Tag (EST)BOR1Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Instituto de Biociências Departamento de GenéticaUniversidade Estadual Paulista Faculdade de Ciências AgronômicasUniversidade Estadual Paulista Instituto de Biociências Departamento de GenéticaUniversidade Estadual Paulista Faculdade de Ciências AgronômicasSociedade Brasileira de GenéticaUniversidade Estadual Paulista (Unesp)Domingues, Douglas Silva [UNESP]Leite, Susi Meire Maximino [UNESP]Farro, Ana Paula Cazerta [UNESP]Coscrato, Virgínia Elias [UNESP]Mori, Edson Seizo [UNESP]Furtado, Edson Luiz [UNESP]Wilcken, Carlos Frederico [UNESP]Velini, Edivaldo Domingues [UNESP]Guerrini, Iraê Amaral [UNESP]Maia, Ivan de Godoy [UNESP]Marino, Celso Luis [UNESP]2014-05-20T13:50:20Z2014-05-20T13:50:20Z2005-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article625-629application/pdfhttp://dx.doi.org/10.1590/S1415-47572005000400017Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005.1415-4757http://hdl.handle.net/11449/1796010.1590/S1415-47572005000400017S1415-47572005000400017S1415-47572005000400017.pdf86492220991761620165348738208319985549344816170238459894858333950000-0003-0431-59420000-0002-6924-835X0000-0003-4524-954XSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2024-01-03T06:23:05Zoai:repositorio.unesp.br:11449/17960Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-01-03T06:23:05Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
spellingShingle Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
Domingues, Douglas Silva [UNESP]
Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
title_short Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_full Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_fullStr Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_full_unstemmed Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
title_sort Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
author Domingues, Douglas Silva [UNESP]
author_facet Domingues, Douglas Silva [UNESP]
Leite, Susi Meire Maximino [UNESP]
Farro, Ana Paula Cazerta [UNESP]
Coscrato, Virgínia Elias [UNESP]
Mori, Edson Seizo [UNESP]
Furtado, Edson Luiz [UNESP]
Wilcken, Carlos Frederico [UNESP]
Velini, Edivaldo Domingues [UNESP]
Guerrini, Iraê Amaral [UNESP]
Maia, Ivan de Godoy [UNESP]
Marino, Celso Luis [UNESP]
author_role author
author2 Leite, Susi Meire Maximino [UNESP]
Farro, Ana Paula Cazerta [UNESP]
Coscrato, Virgínia Elias [UNESP]
Mori, Edson Seizo [UNESP]
Furtado, Edson Luiz [UNESP]
Wilcken, Carlos Frederico [UNESP]
Velini, Edivaldo Domingues [UNESP]
Guerrini, Iraê Amaral [UNESP]
Maia, Ivan de Godoy [UNESP]
Marino, Celso Luis [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Domingues, Douglas Silva [UNESP]
Leite, Susi Meire Maximino [UNESP]
Farro, Ana Paula Cazerta [UNESP]
Coscrato, Virgínia Elias [UNESP]
Mori, Edson Seizo [UNESP]
Furtado, Edson Luiz [UNESP]
Wilcken, Carlos Frederico [UNESP]
Velini, Edivaldo Domingues [UNESP]
Guerrini, Iraê Amaral [UNESP]
Maia, Ivan de Godoy [UNESP]
Marino, Celso Luis [UNESP]
dc.subject.por.fl_str_mv Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
topic Eucalyptus
boron
xylem loading
Expressed Sequence Tag (EST)
BOR1
description Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.
publishDate 2005
dc.date.none.fl_str_mv 2005-01-01
2014-05-20T13:50:20Z
2014-05-20T13:50:20Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S1415-47572005000400017
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005.
1415-4757
http://hdl.handle.net/11449/17960
10.1590/S1415-47572005000400017
S1415-47572005000400017
S1415-47572005000400017.pdf
8649222099176162
0165348738208319
9855493448161702
3845989485833395
0000-0003-0431-5942
0000-0002-6924-835X
0000-0003-4524-954X
url http://dx.doi.org/10.1590/S1415-47572005000400017
http://hdl.handle.net/11449/17960
identifier_str_mv Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005.
1415-4757
10.1590/S1415-47572005000400017
S1415-47572005000400017
S1415-47572005000400017.pdf
8649222099176162
0165348738208319
9855493448161702
3845989485833395
0000-0003-0431-5942
0000-0002-6924-835X
0000-0003-4524-954X
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics and Molecular Biology
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0,638
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eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 625-629
application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv SciELO
reponame:Repositório Institucional da UNESP
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instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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