Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR

Detalhes bibliográficos
Autor(a) principal: Araújo,Cristina P.
Data de Publicação: 2014
Outros Autores: Osório,Ana Luiza A.R., Jorge,Klaudia S.G., Ramos,Carlos A.N., Souza Filho,Antonio F., Vidal,Carlos E.S., Vargas,Agueda P.C., Roxo,Eliana, Rocha,Adalgiza S., Suffys,Philip N., Fonseca Júnior,Antônio A., Silva,Marcio R., Barbosa Neto,José D., Cerqueira,Valíria D., Araújo,Flábio R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Microbiology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822014000200035
Resumo: Post-mortem bacterial culture and specific biochemical tests are currently performed to characterize the etiologic agent of bovine tuberculosis. Cultures take up to 90 days to develop. A diagnosis by molecular tests such as PCR can provide fast and reliable results while significantly decreasing the time of confirmation. In the present study, a nested-PCR system, targeting rv2807, with conventional PCR followed by real-time PCR, was developed to detect Mycobacterium tuberculosis complex (MTC) organisms directly from bovine and bubaline tissue homogenates. The sensitivity and specificity of the reactions were assessed with DNA samples extracted from tuberculous and non-tuberculous mycobacteria, as well as other Actinomycetales species and DNA samples extracted directly from bovine and bubaline tissue homogenates. Regarding the analytical sensitivity, DNA of the M. bovis AN5 strain was detected up to 1.5 pg by nested-PCR, whereas DNA of M. tuberculosis H37Rv strain was detected up to 6.1 pg. The nested-PCR system showed 100% analytical specificity for MTC when tested with DNA of reference strains of non-tuberculous mycobacteria and closely-related Actinomycetales. A clinical sensitivity level of 76.7% was detected with tissues samples positive for MTC by means of the culture and conventional PCR. A clinical specificity of 100% was detected with DNA from tissue samples of cattle with negative results in the comparative intradermal tuberculin test. These cattle exhibited no visible lesions and were negative in the culture for MTC. The use of the nested-PCR assay to detect M. tuberculosis complex in tissue homogenates provided a rapid diagnosis of bovine and bubaline tuberculosis.
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spelling Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCRbovine and bubaline tuberculosisnested-PCRreal-time PCRtissuesanitary inspectionPost-mortem bacterial culture and specific biochemical tests are currently performed to characterize the etiologic agent of bovine tuberculosis. Cultures take up to 90 days to develop. A diagnosis by molecular tests such as PCR can provide fast and reliable results while significantly decreasing the time of confirmation. In the present study, a nested-PCR system, targeting rv2807, with conventional PCR followed by real-time PCR, was developed to detect Mycobacterium tuberculosis complex (MTC) organisms directly from bovine and bubaline tissue homogenates. The sensitivity and specificity of the reactions were assessed with DNA samples extracted from tuberculous and non-tuberculous mycobacteria, as well as other Actinomycetales species and DNA samples extracted directly from bovine and bubaline tissue homogenates. Regarding the analytical sensitivity, DNA of the M. bovis AN5 strain was detected up to 1.5 pg by nested-PCR, whereas DNA of M. tuberculosis H37Rv strain was detected up to 6.1 pg. The nested-PCR system showed 100% analytical specificity for MTC when tested with DNA of reference strains of non-tuberculous mycobacteria and closely-related Actinomycetales. A clinical sensitivity level of 76.7% was detected with tissues samples positive for MTC by means of the culture and conventional PCR. A clinical specificity of 100% was detected with DNA from tissue samples of cattle with negative results in the comparative intradermal tuberculin test. These cattle exhibited no visible lesions and were negative in the culture for MTC. The use of the nested-PCR assay to detect M. tuberculosis complex in tissue homogenates provided a rapid diagnosis of bovine and bubaline tuberculosis.Sociedade Brasileira de Microbiologia2014-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822014000200035Brazilian Journal of Microbiology v.45 n.2 2014reponame:Brazilian Journal of Microbiologyinstname:Sociedade Brasileira de Microbiologia (SBM)instacron:SBM10.1590/S1517-83822014000200035info:eu-repo/semantics/openAccessAraújo,Cristina P.Osório,Ana Luiza A.R.Jorge,Klaudia S.G.Ramos,Carlos A.N.Souza Filho,Antonio F.Vidal,Carlos E.S.Vargas,Agueda P.C.Roxo,ElianaRocha,Adalgiza S.Suffys,Philip N.Fonseca Júnior,Antônio A.Silva,Marcio R.Barbosa Neto,José D.Cerqueira,Valíria D.Araújo,Flábio R.eng2014-09-30T00:00:00Zoai:scielo:S1517-83822014000200035Revistahttps://www.scielo.br/j/bjm/ONGhttps://old.scielo.br/oai/scielo-oai.phpbjm@sbmicrobiologia.org.br||mbmartin@usp.br1678-44051517-8382opendoar:2014-09-30T00:00Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)false
dc.title.none.fl_str_mv Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
title Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
spellingShingle Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
Araújo,Cristina P.
bovine and bubaline tuberculosis
nested-PCR
real-time PCR
tissue
sanitary inspection
title_short Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
title_full Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
title_fullStr Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
title_full_unstemmed Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
title_sort Direct detection of Mycobacterium tuberculosis complex in bovine and bubaline tissues through nested-PCR
author Araújo,Cristina P.
author_facet Araújo,Cristina P.
Osório,Ana Luiza A.R.
Jorge,Klaudia S.G.
Ramos,Carlos A.N.
Souza Filho,Antonio F.
Vidal,Carlos E.S.
Vargas,Agueda P.C.
Roxo,Eliana
Rocha,Adalgiza S.
Suffys,Philip N.
Fonseca Júnior,Antônio A.
Silva,Marcio R.
Barbosa Neto,José D.
Cerqueira,Valíria D.
Araújo,Flábio R.
author_role author
author2 Osório,Ana Luiza A.R.
Jorge,Klaudia S.G.
Ramos,Carlos A.N.
Souza Filho,Antonio F.
Vidal,Carlos E.S.
Vargas,Agueda P.C.
Roxo,Eliana
Rocha,Adalgiza S.
Suffys,Philip N.
Fonseca Júnior,Antônio A.
Silva,Marcio R.
Barbosa Neto,José D.
Cerqueira,Valíria D.
Araújo,Flábio R.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Araújo,Cristina P.
Osório,Ana Luiza A.R.
Jorge,Klaudia S.G.
Ramos,Carlos A.N.
Souza Filho,Antonio F.
Vidal,Carlos E.S.
Vargas,Agueda P.C.
Roxo,Eliana
Rocha,Adalgiza S.
Suffys,Philip N.
Fonseca Júnior,Antônio A.
Silva,Marcio R.
Barbosa Neto,José D.
Cerqueira,Valíria D.
Araújo,Flábio R.
dc.subject.por.fl_str_mv bovine and bubaline tuberculosis
nested-PCR
real-time PCR
tissue
sanitary inspection
topic bovine and bubaline tuberculosis
nested-PCR
real-time PCR
tissue
sanitary inspection
description Post-mortem bacterial culture and specific biochemical tests are currently performed to characterize the etiologic agent of bovine tuberculosis. Cultures take up to 90 days to develop. A diagnosis by molecular tests such as PCR can provide fast and reliable results while significantly decreasing the time of confirmation. In the present study, a nested-PCR system, targeting rv2807, with conventional PCR followed by real-time PCR, was developed to detect Mycobacterium tuberculosis complex (MTC) organisms directly from bovine and bubaline tissue homogenates. The sensitivity and specificity of the reactions were assessed with DNA samples extracted from tuberculous and non-tuberculous mycobacteria, as well as other Actinomycetales species and DNA samples extracted directly from bovine and bubaline tissue homogenates. Regarding the analytical sensitivity, DNA of the M. bovis AN5 strain was detected up to 1.5 pg by nested-PCR, whereas DNA of M. tuberculosis H37Rv strain was detected up to 6.1 pg. The nested-PCR system showed 100% analytical specificity for MTC when tested with DNA of reference strains of non-tuberculous mycobacteria and closely-related Actinomycetales. A clinical sensitivity level of 76.7% was detected with tissues samples positive for MTC by means of the culture and conventional PCR. A clinical specificity of 100% was detected with DNA from tissue samples of cattle with negative results in the comparative intradermal tuberculin test. These cattle exhibited no visible lesions and were negative in the culture for MTC. The use of the nested-PCR assay to detect M. tuberculosis complex in tissue homogenates provided a rapid diagnosis of bovine and bubaline tuberculosis.
publishDate 2014
dc.date.none.fl_str_mv 2014-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822014000200035
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822014000200035
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1517-83822014000200035
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
publisher.none.fl_str_mv Sociedade Brasileira de Microbiologia
dc.source.none.fl_str_mv Brazilian Journal of Microbiology v.45 n.2 2014
reponame:Brazilian Journal of Microbiology
instname:Sociedade Brasileira de Microbiologia (SBM)
instacron:SBM
instname_str Sociedade Brasileira de Microbiologia (SBM)
instacron_str SBM
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reponame_str Brazilian Journal of Microbiology
collection Brazilian Journal of Microbiology
repository.name.fl_str_mv Brazilian Journal of Microbiology - Sociedade Brasileira de Microbiologia (SBM)
repository.mail.fl_str_mv bjm@sbmicrobiologia.org.br||mbmartin@usp.br
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