GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION

Detalhes bibliográficos
Autor(a) principal: Costa, Talison Eugênio da
Data de Publicação: 2020
Outros Autores: Negreiros, Andréia Mitsa Paiva, Souza, Matheus de Freitas, Sales Júnior, Rui, Holanda, Ioná Santos Araújo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Revista Caatinga
Texto Completo: https://periodicos.ufersa.edu.br/caatinga/article/view/9353
Resumo: Macrophomina pseudophaseolina has recently been reported in association with weeds in melon producing areas in Northeastern Brazil. Species from this genus are the causal agents of root rot and vine decline (RRVD) in melon, reducing its productivity. It is needed to know the genetic variability of the pathogen to develop effective control methods. Thus, this work aimed to assess the genetic diversity among M. pseudophaseolina isolates collected from the weeds Trianthema portulacastrum L. and Boerhavia diffusa L. using ISSR and RAPD markers. For this, 41 M. pseudophaseolina isolates were submitted to amplification with five ISSR and ten RAPD primers. Genetic similarity was analyzed using the Jaccard’s coefficient and cluster analysis was performed by the UPGMA method. Combining data from both markers, the 41 isolates were separated into eight groups. Most groups were not arranged according to geographical origin and host of the pathogen. The genetic similarity among isolates ranged from 0.15 to 0.87. On the other hand, the highest genetic dissimilarity (85%) was observed between the isolate MpBr11, collected from T. portulacastrum in Icapuí (CE), and MpBr65, collected from B. diffusa in Assú (RN). Results obtained herein can assist breeding programs for the selection of resistance sources and the development of effective control methods against RRVD in melon.  
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spelling GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGIONSIMILARIDADE GENÉTICA DE ISOLADOS DE Macrophomina pseudophaseolina ASSOCIADOS A PLANTAS DANINHAS NO SEMI-ÁRIDO BRASILEIROVariabilidade genética. RAPD. ISSR. Melão.Genetic variability. RAPD. ISSR. Melon.Macrophomina pseudophaseolina has recently been reported in association with weeds in melon producing areas in Northeastern Brazil. Species from this genus are the causal agents of root rot and vine decline (RRVD) in melon, reducing its productivity. It is needed to know the genetic variability of the pathogen to develop effective control methods. Thus, this work aimed to assess the genetic diversity among M. pseudophaseolina isolates collected from the weeds Trianthema portulacastrum L. and Boerhavia diffusa L. using ISSR and RAPD markers. For this, 41 M. pseudophaseolina isolates were submitted to amplification with five ISSR and ten RAPD primers. Genetic similarity was analyzed using the Jaccard’s coefficient and cluster analysis was performed by the UPGMA method. Combining data from both markers, the 41 isolates were separated into eight groups. Most groups were not arranged according to geographical origin and host of the pathogen. The genetic similarity among isolates ranged from 0.15 to 0.87. On the other hand, the highest genetic dissimilarity (85%) was observed between the isolate MpBr11, collected from T. portulacastrum in Icapuí (CE), and MpBr65, collected from B. diffusa in Assú (RN). Results obtained herein can assist breeding programs for the selection of resistance sources and the development of effective control methods against RRVD in melon.  Macrophomina pseudophaseolina foi recentemente relatada em áreas produtoras de melão em associação com plantas daninhas na região Nordeste. Espécies do gênero são agentes da podridão radicular e declínio das ramas (PRDR) do meloeiro, doença que reduz sua produtividade. O conhecimento da diversidade genética do patógeno é importante no desenvolvimento de métodos de controle eficientes. Nesse contexto, o objetivo desse trabalho foi analisar a variabilidade genética de isolados de M. pseudophaseolina coletados das plantas daninhas Trianthema portulacastrum L. e Boerhavia diffusa L. por meio dos marcadores moleculares ISSR e RAPD. Para isto, 41 isolados de M. pseudophaseolina foram submetidos à amplificação com cinco iniciadores ISSR e dez RAPD. A similaridade genética foi analisada através do coeficiente de Jaccard e o agrupamento obtido com o método UPGMA. Com a combinação dos dados dos marcadores os 41 isolados foram agrupados em 8 grupos principais. Não foi observado, para grande maioria dos grupos gerados, a relação do agrupamento de acordo com hospedeiro ou local de coleta. A similaridade genética entre os isolados variou de 0,15 a 0,87. A maior dissimilaridade genética (85%) foi observada entre o isolado MpBr11, coletado de T. portulacastrum no município de Icapuí/CE, do isolado MpBr65, coletado de B. diffusa em Assú/RN. Estas informações podem ser úteis para auxiliar programas de melhoramento genético na seleção de fontes de resistência e/ou em testes de métodos de controle contra PRDR do melão.  Universidade Federal Rural do Semi-Árido2020-10-21info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://periodicos.ufersa.edu.br/caatinga/article/view/935310.1590/1983-21252020v33n405rcREVISTA CAATINGA; Vol. 33 No. 4 (2020); 908-917Revista Caatinga; v. 33 n. 4 (2020); 908-9171983-21250100-316Xreponame:Revista Caatingainstname:Universidade Federal Rural do Semi-Árido (UFERSA)instacron:UFERSAenghttps://periodicos.ufersa.edu.br/caatinga/article/view/9353/10357Copyright (c) 2020 Revista Caatingainfo:eu-repo/semantics/openAccessCosta, Talison Eugênio daNegreiros, Andréia Mitsa PaivaSouza, Matheus de FreitasSales Júnior, Rui Holanda, Ioná Santos Araújo2023-07-21T16:40:05Zoai:ojs.periodicos.ufersa.edu.br:article/9353Revistahttps://periodicos.ufersa.edu.br/index.php/caatinga/indexPUBhttps://periodicos.ufersa.edu.br/index.php/caatinga/oaipatricio@ufersa.edu.br|| caatinga@ufersa.edu.br1983-21250100-316Xopendoar:2024-04-29T09:46:48.263215Revista Caatinga - Universidade Federal Rural do Semi-Árido (UFERSA)true
dc.title.none.fl_str_mv GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
SIMILARIDADE GENÉTICA DE ISOLADOS DE Macrophomina pseudophaseolina ASSOCIADOS A PLANTAS DANINHAS NO SEMI-ÁRIDO BRASILEIRO
title GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
spellingShingle GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
Costa, Talison Eugênio da
Variabilidade genética. RAPD. ISSR. Melão.
Genetic variability. RAPD. ISSR. Melon.
title_short GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
title_full GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
title_fullStr GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
title_full_unstemmed GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
title_sort GENETIC SIMILARITY OF Macrophomina pseudophaseolina ISOLATES ASSOCIATED WITH WEEDS IN THE BRAZILIAN SEMIARID REGION
author Costa, Talison Eugênio da
author_facet Costa, Talison Eugênio da
Negreiros, Andréia Mitsa Paiva
Souza, Matheus de Freitas
Sales Júnior, Rui
Holanda, Ioná Santos Araújo
author_role author
author2 Negreiros, Andréia Mitsa Paiva
Souza, Matheus de Freitas
Sales Júnior, Rui
Holanda, Ioná Santos Araújo
author2_role author
author
author
author
dc.contributor.author.fl_str_mv Costa, Talison Eugênio da
Negreiros, Andréia Mitsa Paiva
Souza, Matheus de Freitas
Sales Júnior, Rui
Holanda, Ioná Santos Araújo
dc.subject.por.fl_str_mv Variabilidade genética. RAPD. ISSR. Melão.
Genetic variability. RAPD. ISSR. Melon.
topic Variabilidade genética. RAPD. ISSR. Melão.
Genetic variability. RAPD. ISSR. Melon.
description Macrophomina pseudophaseolina has recently been reported in association with weeds in melon producing areas in Northeastern Brazil. Species from this genus are the causal agents of root rot and vine decline (RRVD) in melon, reducing its productivity. It is needed to know the genetic variability of the pathogen to develop effective control methods. Thus, this work aimed to assess the genetic diversity among M. pseudophaseolina isolates collected from the weeds Trianthema portulacastrum L. and Boerhavia diffusa L. using ISSR and RAPD markers. For this, 41 M. pseudophaseolina isolates were submitted to amplification with five ISSR and ten RAPD primers. Genetic similarity was analyzed using the Jaccard’s coefficient and cluster analysis was performed by the UPGMA method. Combining data from both markers, the 41 isolates were separated into eight groups. Most groups were not arranged according to geographical origin and host of the pathogen. The genetic similarity among isolates ranged from 0.15 to 0.87. On the other hand, the highest genetic dissimilarity (85%) was observed between the isolate MpBr11, collected from T. portulacastrum in Icapuí (CE), and MpBr65, collected from B. diffusa in Assú (RN). Results obtained herein can assist breeding programs for the selection of resistance sources and the development of effective control methods against RRVD in melon.  
publishDate 2020
dc.date.none.fl_str_mv 2020-10-21
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://periodicos.ufersa.edu.br/caatinga/article/view/9353
10.1590/1983-21252020v33n405rc
url https://periodicos.ufersa.edu.br/caatinga/article/view/9353
identifier_str_mv 10.1590/1983-21252020v33n405rc
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://periodicos.ufersa.edu.br/caatinga/article/view/9353/10357
dc.rights.driver.fl_str_mv Copyright (c) 2020 Revista Caatinga
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2020 Revista Caatinga
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
publisher.none.fl_str_mv Universidade Federal Rural do Semi-Árido
dc.source.none.fl_str_mv REVISTA CAATINGA; Vol. 33 No. 4 (2020); 908-917
Revista Caatinga; v. 33 n. 4 (2020); 908-917
1983-2125
0100-316X
reponame:Revista Caatinga
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reponame_str Revista Caatinga
collection Revista Caatinga
repository.name.fl_str_mv Revista Caatinga - Universidade Federal Rural do Semi-Árido (UFERSA)
repository.mail.fl_str_mv patricio@ufersa.edu.br|| caatinga@ufersa.edu.br
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