Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum

Detalhes bibliográficos
Autor(a) principal: de Almeida, Joao N., Jr.
Data de Publicação: 2017
Outros Autores: Favero Gimenes, Viviane M., Francisco, Elaine C. [UNIFESP], Machado Siqueira, Lumena P., Goncalves de Almeida, Renato K., Guitard, Juliette, Hennequin, Christophe, Colombo, Arnaldo L. [UNIFESP], Benard, Gil, Rossi, Flavia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNIFESP
Texto Completo: http://repositorio.unifesp.br/handle/11600/51441
http://dx.doi.org/10.1128/JCM.00461-17
Resumo: Trichosporon species are relevant etiologic agents of hospital-acquired infections. High mortality rates are attributed to Trichosporon deep-seated infections in immuno-compromised individuals, making fast and accurate species identification relevant for hastening the discovery of best-targeted therapy. Recently, Trichosporon taxonomy has been reassessed, and three genera have been proposed for the pathogenic species: Trichosporon, Cutaneotrichosporon, and Apiotrichum. Matrix-assisted laser desorption ionization- time of flight mass spectrometry (MALDI-TOF MS) has replaced old phenotypic methods for microorganism identification in clinical laboratories, but spectral profile databases have to be evaluated and improved for optimal species identification performance. Vitek MS (bioMerieux) is one of the commercially available MALDI-TOF MS platforms for pathogen identification, and its spectral profile databases remain poorly evaluated for Trichosporon, Cutaneotrichosporon, and Apiotrichum species identification. We herein evaluated and improved Vitek MS for the identification of the main clinical relevant species of Trichosporon, Cutaneotrichosporon, and Apiotrichum using a large set of strains and isolates belonging to different yeast collections in Brazil and France.
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spelling de Almeida, Joao N., Jr.Favero Gimenes, Viviane M.Francisco, Elaine C. [UNIFESP]Machado Siqueira, Lumena P.Goncalves de Almeida, Renato K.Guitard, JulietteHennequin, ChristopheColombo, Arnaldo L. [UNIFESP]Benard, GilRossi, Flavia2019-08-19T11:49:56Z2019-08-19T11:49:56Z2017Journal Of Clinical Microbiology. Washington, v. 55, n. 8, p. 2439-2444, 2017.0095-1137http://repositorio.unifesp.br/handle/11600/51441http://dx.doi.org/10.1128/JCM.00461-1710.1128/JCM.00461-17WOS:000408109800019Trichosporon species are relevant etiologic agents of hospital-acquired infections. High mortality rates are attributed to Trichosporon deep-seated infections in immuno-compromised individuals, making fast and accurate species identification relevant for hastening the discovery of best-targeted therapy. Recently, Trichosporon taxonomy has been reassessed, and three genera have been proposed for the pathogenic species: Trichosporon, Cutaneotrichosporon, and Apiotrichum. Matrix-assisted laser desorption ionization- time of flight mass spectrometry (MALDI-TOF MS) has replaced old phenotypic methods for microorganism identification in clinical laboratories, but spectral profile databases have to be evaluated and improved for optimal species identification performance. Vitek MS (bioMerieux) is one of the commercially available MALDI-TOF MS platforms for pathogen identification, and its spectral profile databases remain poorly evaluated for Trichosporon, Cutaneotrichosporon, and Apiotrichum species identification. We herein evaluated and improved Vitek MS for the identification of the main clinical relevant species of Trichosporon, Cutaneotrichosporon, and Apiotrichum using a large set of strains and isolates belonging to different yeast collections in Brazil and France.National Council of Technological and Scientific Development (CNPq)Univ São Paulo, Fac Med, Hosp Clin, Cent Lab Div LIM03, São Paulo, BrazilUniv São Paulo, Inst Med Trop São Paulo, Lab Mycol LIM 53, São Paulo, BrazilUniv Fed São Paulo, Escola Paulista Med, Lab Especial Micol, São Paulo, BrazilHop St Antoine, AP HP, Serv Parasitol Mycol, Paris, FranceUPMC Univ Paris 06, INSERM, CNRS, UMR 1135,Sorbonne Univ,ERL 8255, Paris, FranceCtr Immunol & Malad Infect CIMI Paris, Paris, FranceUniv Fed São Paulo, Escola Paulista Med, Lab Especial Micol, São Paulo, BrazilCNPq: 307510/2015-8Web of Science2439-2444engAmer Soc MicrobiologyTrichosporonCutaneotrichosporonApiotrichumVitek MMALDI-TOF mass spectrometryEvaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichuminfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da UNIFESPinstname:Universidade Federal de São Paulo (UNIFESP)instacron:UNIFESP11600/514412022-06-02 09:20:43.959metadata only accessoai:repositorio.unifesp.br:11600/51441Repositório InstitucionalPUBhttp://www.repositorio.unifesp.br/oai/requestopendoar:34652023-05-25T12:15:06.857708Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)false
dc.title.en.fl_str_mv Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
title Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
spellingShingle Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
de Almeida, Joao N., Jr.
Trichosporon
Cutaneotrichosporon
Apiotrichum
Vitek M
MALDI-TOF mass spectrometry
title_short Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
title_full Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
title_fullStr Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
title_full_unstemmed Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
title_sort Evaluating and Improving Vitek MS for Identification of Clinically Relevant Species of Trichosporon and the Closely Related Genera Cutaneotrichosporon and Apiotrichum
author de Almeida, Joao N., Jr.
author_facet de Almeida, Joao N., Jr.
Favero Gimenes, Viviane M.
Francisco, Elaine C. [UNIFESP]
Machado Siqueira, Lumena P.
Goncalves de Almeida, Renato K.
Guitard, Juliette
Hennequin, Christophe
Colombo, Arnaldo L. [UNIFESP]
Benard, Gil
Rossi, Flavia
author_role author
author2 Favero Gimenes, Viviane M.
Francisco, Elaine C. [UNIFESP]
Machado Siqueira, Lumena P.
Goncalves de Almeida, Renato K.
Guitard, Juliette
Hennequin, Christophe
Colombo, Arnaldo L. [UNIFESP]
Benard, Gil
Rossi, Flavia
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv de Almeida, Joao N., Jr.
Favero Gimenes, Viviane M.
Francisco, Elaine C. [UNIFESP]
Machado Siqueira, Lumena P.
Goncalves de Almeida, Renato K.
Guitard, Juliette
Hennequin, Christophe
Colombo, Arnaldo L. [UNIFESP]
Benard, Gil
Rossi, Flavia
dc.subject.eng.fl_str_mv Trichosporon
Cutaneotrichosporon
Apiotrichum
Vitek M
MALDI-TOF mass spectrometry
topic Trichosporon
Cutaneotrichosporon
Apiotrichum
Vitek M
MALDI-TOF mass spectrometry
description Trichosporon species are relevant etiologic agents of hospital-acquired infections. High mortality rates are attributed to Trichosporon deep-seated infections in immuno-compromised individuals, making fast and accurate species identification relevant for hastening the discovery of best-targeted therapy. Recently, Trichosporon taxonomy has been reassessed, and three genera have been proposed for the pathogenic species: Trichosporon, Cutaneotrichosporon, and Apiotrichum. Matrix-assisted laser desorption ionization- time of flight mass spectrometry (MALDI-TOF MS) has replaced old phenotypic methods for microorganism identification in clinical laboratories, but spectral profile databases have to be evaluated and improved for optimal species identification performance. Vitek MS (bioMerieux) is one of the commercially available MALDI-TOF MS platforms for pathogen identification, and its spectral profile databases remain poorly evaluated for Trichosporon, Cutaneotrichosporon, and Apiotrichum species identification. We herein evaluated and improved Vitek MS for the identification of the main clinical relevant species of Trichosporon, Cutaneotrichosporon, and Apiotrichum using a large set of strains and isolates belonging to different yeast collections in Brazil and France.
publishDate 2017
dc.date.issued.fl_str_mv 2017
dc.date.accessioned.fl_str_mv 2019-08-19T11:49:56Z
dc.date.available.fl_str_mv 2019-08-19T11:49:56Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv Journal Of Clinical Microbiology. Washington, v. 55, n. 8, p. 2439-2444, 2017.
dc.identifier.uri.fl_str_mv http://repositorio.unifesp.br/handle/11600/51441
http://dx.doi.org/10.1128/JCM.00461-17
dc.identifier.issn.none.fl_str_mv 0095-1137
dc.identifier.doi.none.fl_str_mv 10.1128/JCM.00461-17
dc.identifier.wos.none.fl_str_mv WOS:000408109800019
identifier_str_mv Journal Of Clinical Microbiology. Washington, v. 55, n. 8, p. 2439-2444, 2017.
0095-1137
10.1128/JCM.00461-17
WOS:000408109800019
url http://repositorio.unifesp.br/handle/11600/51441
http://dx.doi.org/10.1128/JCM.00461-17
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2439-2444
dc.publisher.none.fl_str_mv Amer Soc Microbiology
publisher.none.fl_str_mv Amer Soc Microbiology
dc.source.none.fl_str_mv reponame:Repositório Institucional da UNIFESP
instname:Universidade Federal de São Paulo (UNIFESP)
instacron:UNIFESP
instname_str Universidade Federal de São Paulo (UNIFESP)
instacron_str UNIFESP
institution UNIFESP
reponame_str Repositório Institucional da UNIFESP
collection Repositório Institucional da UNIFESP
repository.name.fl_str_mv Repositório Institucional da UNIFESP - Universidade Federal de São Paulo (UNIFESP)
repository.mail.fl_str_mv
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