Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments

Detalhes bibliográficos
Autor(a) principal: Streher, Annia Susin [UNESP]
Data de Publicação: 2020
Outros Autores: Torres, Ricardo da Silva, Morellato, Leonor Patrícia Cerdeira [UNESP], Silva, Thiago Sanna Freire
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.rse.2020.111828
http://hdl.handle.net/11449/201704
Resumo: Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity.
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spelling Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environmentsCerradoLDMCLeaf spectroscopyLMAPartial least squares regression (PLSR)Plant functional traits, campo rupestreGeneralized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista (Unesp) Instituto de Biociências Departamento de BiodiversidadeDepartment of ICT and Natural Sciences NTNU - Norwegian University of Science and TechnologyUniversidade Estadual Paulista (Unesp) Instituto de Biociências Departamento de Biodiversidade Phenology LabBiological and Environmental Sciences Faculty of Natural Resources University of Stirling. StirlingUniversidade Estadual Paulista (Unesp) Instituto de Biociências Departamento de BiodiversidadeUniversidade Estadual Paulista (Unesp) Instituto de Biociências Departamento de Biodiversidade Phenology LabFAPESP: 2009/54208-6FAPESP: 2013/50155-0FAPESP: 2015/17534-3FAPESP: 2016/00757-2FAPESP: 2017/01912-4CNPq: 307560/2016-3CNPq: 310144/2015-9CNPq: 310761/2014-0CNPq: 311820/2018-2CNPq: 400717/2013-1Universidade Estadual Paulista (Unesp)NTNU - Norwegian University of Science and TechnologyUniversity of Stirling. StirlingStreher, Annia Susin [UNESP]Torres, Ricardo da SilvaMorellato, Leonor Patrícia Cerdeira [UNESP]Silva, Thiago Sanna Freire2020-12-12T02:39:40Z2020-12-12T02:39:40Z2020-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.rse.2020.111828Remote Sensing of Environment, v. 244.0034-4257http://hdl.handle.net/11449/20170410.1016/j.rse.2020.1118282-s2.0-85083648546Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengRemote Sensing of Environmentinfo:eu-repo/semantics/openAccess2021-10-22T21:03:00Zoai:repositorio.unesp.br:11449/201704Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-22T21:03Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
title Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
spellingShingle Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
Streher, Annia Susin [UNESP]
Cerrado
LDMC
Leaf spectroscopy
LMA
Partial least squares regression (PLSR)
Plant functional traits, campo rupestre
title_short Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
title_full Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
title_fullStr Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
title_full_unstemmed Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
title_sort Accuracy and limitations for spectroscopic prediction of leaf traits in seasonally dry tropical environments
author Streher, Annia Susin [UNESP]
author_facet Streher, Annia Susin [UNESP]
Torres, Ricardo da Silva
Morellato, Leonor Patrícia Cerdeira [UNESP]
Silva, Thiago Sanna Freire
author_role author
author2 Torres, Ricardo da Silva
Morellato, Leonor Patrícia Cerdeira [UNESP]
Silva, Thiago Sanna Freire
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
NTNU - Norwegian University of Science and Technology
University of Stirling. Stirling
dc.contributor.author.fl_str_mv Streher, Annia Susin [UNESP]
Torres, Ricardo da Silva
Morellato, Leonor Patrícia Cerdeira [UNESP]
Silva, Thiago Sanna Freire
dc.subject.por.fl_str_mv Cerrado
LDMC
Leaf spectroscopy
LMA
Partial least squares regression (PLSR)
Plant functional traits, campo rupestre
topic Cerrado
LDMC
Leaf spectroscopy
LMA
Partial least squares regression (PLSR)
Plant functional traits, campo rupestre
description Generalized assessments of the accuracy of spectroscopic estimates of ecologically important leaf traits such as leaf mass per area (LMA) and leaf dry matter content (LDMC) are still lacking for most ecosystems, and particularly for non-forested and/or seasonally dry tropical vegetation. Here, we tested the ability of using leaf reflectance spectra to estimate LMA and LDMC and classify plant growth forms within the cerrado and campo rupestre seasonally dry non-forest vegetation types of Southeastern Brazil, filling an existing gap in published assessments of leaf optical properties and plant traits in such environments. We measured leaf reflectance spectra from 1648 individual plants comprising grasses, herbs, shrubs, and trees, developed partial least squares regression (PLSR) models linking LMA and LDMC to leaf spectra (400–2500 nm), and identified the spectral regions with the greatest discriminatory power among growth forms using Bhattacharyya distances. We accurately predicted leaf functional traits and identified different growth forms. LMA was overall more accurately predicted (RMSE = 8.58%) than LDMC (RMSE = 9.75%). Our model including all sampled plants was not biased towards any particular growth form, but growth-form specific models yielded higher accuracies and showed that leaf traits from woody plants can be more accurately estimated than for grasses and forbs, independently of the trait measured. We observed a large range of LMA values (31.80–620.81 g/m2) rarely observed in tropical or temperate forests, and demonstrated that values above 300 g/m2 could not be accurately estimated. Our results suggest that spectroscopy may have an intrinsic saturation point, and/or that PLSR, the current approach of choice for estimating traits from plant spectra, is not able to model the entire range of LMA values. This finding has very important implications to our ability to use field, airborne, and orbital spectroscopic methods to derive generalizable functional information. We thus highlight the need for increasing spectroscopic sampling and research efforts in drier non-forested environments, where environmental pressures lead to leaf adaptations and allocation strategies that are very different from forested ecosystems. Our findings also confirm that leaf reflectance spectra can provide important information regarding differences in leaf metabolism, structure, and chemical composition. Such information enabled us to accurately discriminate plant growth forms in these environments regardless of lack of variation in leaf economic traits, encouraging further adoption of remote sensing methods by ecologists and allowing a more comprehensive assessment of plant functional diversity.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-12T02:39:40Z
2020-12-12T02:39:40Z
2020-07-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.rse.2020.111828
Remote Sensing of Environment, v. 244.
0034-4257
http://hdl.handle.net/11449/201704
10.1016/j.rse.2020.111828
2-s2.0-85083648546
url http://dx.doi.org/10.1016/j.rse.2020.111828
http://hdl.handle.net/11449/201704
identifier_str_mv Remote Sensing of Environment, v. 244.
0034-4257
10.1016/j.rse.2020.111828
2-s2.0-85083648546
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Remote Sensing of Environment
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
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reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
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instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
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reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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