Diagnosis of Giardia infections by PCR-based methods in children of an endemic area

Detalhes bibliográficos
Autor(a) principal: David, E. B. [UNESP]
Data de Publicação: 2011
Outros Autores: Coradi, S. T., Oliveira-Sequeira, T. C. G. [UNESP], Ribolla, P. E. M. [UNESP], Katagiri, S. [UNESP], Guimaraes, S. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext
http://hdl.handle.net/11449/18940
Resumo: The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost.
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spelling Diagnosis of Giardia infections by PCR-based methods in children of an endemic areaGiardia duodenalischildrendiagnosisPCRThe present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)UNESP Univ Estadual Paulista, São Paulo State Univ, Dept Parasitol, Botucatu Biosci Inst, Botucatu, SP, BrazilUniv Sagrado Coracao, USC, Dept Biol & Hlth Sci, Bauru, SP, BrazilUNESP Univ Estadual Paulista, São Paulo State Univ, Dept Parasitol, Botucatu Biosci Inst, Botucatu, SP, BrazilFAPESP: 06/56151-3Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)Universidade Estadual Paulista (Unesp)Universidade de São Paulo (USP)David, E. B. [UNESP]Coradi, S. T.Oliveira-Sequeira, T. C. G. [UNESP]Ribolla, P. E. M. [UNESP]Katagiri, S. [UNESP]Guimaraes, S. [UNESP]2014-05-20T13:53:06Z2014-05-20T13:53:06Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article209-215application/pdfhttp://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttextJournal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011.1678-9199http://hdl.handle.net/11449/18940S1678-91992011000200012WOS:000290866500012S1678-91992011000200012.pdf35771497484568800000-0001-8735-6090Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseases1.7820,573info:eu-repo/semantics/openAccess2024-01-13T06:33:28Zoai:repositorio.unesp.br:11449/18940Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-01-13T06:33:28Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
spellingShingle Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
David, E. B. [UNESP]
Giardia duodenalis
children
diagnosis
PCR
title_short Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_full Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_fullStr Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_full_unstemmed Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_sort Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
author David, E. B. [UNESP]
author_facet David, E. B. [UNESP]
Coradi, S. T.
Oliveira-Sequeira, T. C. G. [UNESP]
Ribolla, P. E. M. [UNESP]
Katagiri, S. [UNESP]
Guimaraes, S. [UNESP]
author_role author
author2 Coradi, S. T.
Oliveira-Sequeira, T. C. G. [UNESP]
Ribolla, P. E. M. [UNESP]
Katagiri, S. [UNESP]
Guimaraes, S. [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade de São Paulo (USP)
dc.contributor.author.fl_str_mv David, E. B. [UNESP]
Coradi, S. T.
Oliveira-Sequeira, T. C. G. [UNESP]
Ribolla, P. E. M. [UNESP]
Katagiri, S. [UNESP]
Guimaraes, S. [UNESP]
dc.subject.por.fl_str_mv Giardia duodenalis
children
diagnosis
PCR
topic Giardia duodenalis
children
diagnosis
PCR
description The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit (R)) and polymerase chain reaction (PCR)-based methods. of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost.
publishDate 2011
dc.date.none.fl_str_mv 2011-01-01
2014-05-20T13:53:06Z
2014-05-20T13:53:06Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext
Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011.
1678-9199
http://hdl.handle.net/11449/18940
S1678-91992011000200012
WOS:000290866500012
S1678-91992011000200012.pdf
3577149748456880
0000-0001-8735-6090
url http://www.scielo.br/scielo.php?pid=S1678-91992011000200012&script=sci_arttext
http://hdl.handle.net/11449/18940
identifier_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases. Botucatu: Cevap-unesp, v. 17, n. 2, p. 209-215, 2011.
1678-9199
S1678-91992011000200012
WOS:000290866500012
S1678-91992011000200012.pdf
3577149748456880
0000-0001-8735-6090
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases
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dc.format.none.fl_str_mv 209-215
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dc.publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)
publisher.none.fl_str_mv Universidade Estadual Paulista (Unesp), Centro de Estudos de Venenos e Animais Peçonhentos (CEVAP)
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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