Diagnosis of Giardia infections by PCR-based methods in children of an endemic area

Detalhes bibliográficos
Autor(a) principal: David, E. B. [UNESP]
Data de Publicação: 2011
Outros Autores: Coradi, S. T., Oliveira-Sequeira, T. C.G. [UNESP], Ribolla, P. E.M. [UNESP], Katagiri, S. [UNESP], Guimarães, S. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/s1678-91992011000200012
http://hdl.handle.net/11449/226362
Resumo: The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011.
id UNSP_9dc6ecc0ad0b2ad5dc6604900c6c9f8c
oai_identifier_str oai:repositorio.unesp.br:11449/226362
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Diagnosis of Giardia infections by PCR-based methods in children of an endemic areaChildrenDiagnosisGiardia duodenalisPCRThe present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011.Department of Parasitology Botucatu Biosciences Institute São Paulo State University (UNESP - Univ Estadual Paulista), Botucatu, São Paulo StateDepartment of Biological and Health Sciences Sacred Heart University USC, Bauru, São Paulo StateDepartment of Parasitology Botucatu Biosciences Institute São Paulo State University (UNESP - Univ Estadual Paulista), Botucatu, São Paulo StateUniversidade Estadual Paulista (UNESP)USCDavid, E. B. [UNESP]Coradi, S. T.Oliveira-Sequeira, T. C.G. [UNESP]Ribolla, P. E.M. [UNESP]Katagiri, S. [UNESP]Guimarães, S. [UNESP]2022-04-28T22:37:27Z2022-04-28T22:37:27Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article209-215http://dx.doi.org/10.1590/s1678-91992011000200012Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011.1678-9199http://hdl.handle.net/11449/22636210.1590/s1678-919920110002000122-s2.0-79958168406Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Venomous Animals and Toxins Including Tropical Diseasesinfo:eu-repo/semantics/openAccess2022-04-28T22:37:27Zoai:repositorio.unesp.br:11449/226362Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-04-28T22:37:27Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
spellingShingle Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
David, E. B. [UNESP]
Children
Diagnosis
Giardia duodenalis
PCR
title_short Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_full Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_fullStr Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_full_unstemmed Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
title_sort Diagnosis of Giardia infections by PCR-based methods in children of an endemic area
author David, E. B. [UNESP]
author_facet David, E. B. [UNESP]
Coradi, S. T.
Oliveira-Sequeira, T. C.G. [UNESP]
Ribolla, P. E.M. [UNESP]
Katagiri, S. [UNESP]
Guimarães, S. [UNESP]
author_role author
author2 Coradi, S. T.
Oliveira-Sequeira, T. C.G. [UNESP]
Ribolla, P. E.M. [UNESP]
Katagiri, S. [UNESP]
Guimarães, S. [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
USC
dc.contributor.author.fl_str_mv David, E. B. [UNESP]
Coradi, S. T.
Oliveira-Sequeira, T. C.G. [UNESP]
Ribolla, P. E.M. [UNESP]
Katagiri, S. [UNESP]
Guimarães, S. [UNESP]
dc.subject.por.fl_str_mv Children
Diagnosis
Giardia duodenalis
PCR
topic Children
Diagnosis
Giardia duodenalis
PCR
description The present study was designed to estimate the prevalence of Giardia infection in preschool- and school-aged children living in an endemic area. Fecal samples from 573 children were processed by zinc sulfate centrifugal flotation, centrifugal sedimentation (using a commercial device for fecal concentration - TF-Test kit®) and polymerase chain reaction (PCR)-based methods. Of the stool samples assessed, 277 (48.3%) were positive for intestinal parasites and/or commensal protozoa. Centrifugal flotation presented the highest diagnostic sensitivity for Giardia infections. The kappa index revealed that both coproparasitological techniques closely agreed on the Giardia diagnosis (86%) versus satisfactory (72%) and poor (35%) concordances for commensal protozoan and helminth infections, respectively. Concerning Giardia molecular diagnosis, from the 71 microscopy-positive samples, specific amplification of gdh and tpi fragments was noted in 68 (95.7%) and 64 (90%) samples, respectively. Amplification of gdh and tpi genes was observed, respectively, in 95.7% and 90% of microscopy-positive Giardia samples. For 144 microscopy-negative samples, gdh and tpi gene amplification products were obtained from 8.3% and 35.9% samples, respectively. The agreement between these genes was about 40%. The centrifuge-flotation based method was the most suitable means of Giardia diagnosis assessed in the present study by combining accuracy and low cost. © CEVAP 2011.
publishDate 2011
dc.date.none.fl_str_mv 2011-01-01
2022-04-28T22:37:27Z
2022-04-28T22:37:27Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/s1678-91992011000200012
Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011.
1678-9199
http://hdl.handle.net/11449/226362
10.1590/s1678-91992011000200012
2-s2.0-79958168406
url http://dx.doi.org/10.1590/s1678-91992011000200012
http://hdl.handle.net/11449/226362
identifier_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases, v. 17, n. 2, p. 209-215, 2011.
1678-9199
10.1590/s1678-91992011000200012
2-s2.0-79958168406
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Venomous Animals and Toxins Including Tropical Diseases
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 209-215
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1792961846504849408