Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism

Detalhes bibliográficos
Autor(a) principal: Gismene, Carolina [UNESP]
Data de Publicação: 2022
Outros Autores: Gonzalez, Jorge Enrique Hernandez [UNESP], Santisteban, Angela Rocio Nino [UNESP], Nascimento, Andrey Fabricio Ziem, Cunha, Lucas dos Santos, Moraes, Fabio Rogerio de [UNESP], Oliveira, Cristiano Luis Pinto de, Oliveira, Caio C., Provazzi, Paola Jocelan Scarin[UNESP], Pascutti, Pedro Geraldo, Arni, Raghuvir Krishnaswamy [UNESP], Mariutti, Ricardo Barros [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/ijms23179857
http://hdl.handle.net/11449/237897
Resumo: Staphylococcal exfoliative toxins (ETs) are glutamyl endopeptidases that specifically cleave the Glu381-Gly382 bond in the ectodomains of desmoglein 1 (Dsg1) via complex action mechanisms. To date, four ETs have been identified in different Staphylococcus aureus strains and ETE is the most recently characterized. The unusual properties of ETs have been attributed to a unique structural feature, i.e., the 180 degrees flip of the carbonyl oxygen (O) of the nonconserved residue 192/186 (ETA/ETE numbering), not conducive to the oxyanion hole formation. We report the crystal structure of ETE determined at 1.61 angstrom resolution, in which P186(O) adopts two conformations displaying a 180 degrees rotation. This finding, together with free energy calculations, supports the existence of a dynamic transition between the conformations under the tested conditions. Moreover, enzymatic assays showed no significant differences in the esterolytic efficiency of ETE and ETE/P186G, a mutant predicted to possess a functional oxyanion hole, thus downplaying the influence of the flip on the activity. Finally, we observed the formation of ETE homodimers in solution and the predicted homodimeric structure revealed the participation of a characteristic nonconserved loop in the interface and the partial occlusion of the protein active site, suggesting that monomerization is required for enzymatic activity.
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spelling Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action MechanismStaphylococcal exfoliative toxin EProline flipHomodimerizationX-ray diffractionMolecular dynamicsStaphylococcal exfoliative toxins (ETs) are glutamyl endopeptidases that specifically cleave the Glu381-Gly382 bond in the ectodomains of desmoglein 1 (Dsg1) via complex action mechanisms. To date, four ETs have been identified in different Staphylococcus aureus strains and ETE is the most recently characterized. The unusual properties of ETs have been attributed to a unique structural feature, i.e., the 180 degrees flip of the carbonyl oxygen (O) of the nonconserved residue 192/186 (ETA/ETE numbering), not conducive to the oxyanion hole formation. We report the crystal structure of ETE determined at 1.61 angstrom resolution, in which P186(O) adopts two conformations displaying a 180 degrees rotation. This finding, together with free energy calculations, supports the existence of a dynamic transition between the conformations under the tested conditions. Moreover, enzymatic assays showed no significant differences in the esterolytic efficiency of ETE and ETE/P186G, a mutant predicted to possess a functional oxyanion hole, thus downplaying the influence of the flip on the activity. Finally, we observed the formation of ETE homodimers in solution and the predicted homodimeric structure revealed the participation of a characteristic nonconserved loop in the interface and the partial occlusion of the protein active site, suggesting that monomerization is required for enzymatic activity.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)IBILCE UNESP, Multiuser Ctr Biomol Innovat, BR-15054000 Sao Jose Do Rio Preto, BrazilBrazilian Ctr Res Energy & Mat CNPEM, Brazilian Synchrotron Light Lab LNLS, BR-13083970 Campinas, SP, BrazilUniv Estadual Campinas, Inst Chem, BR-13083970 Campinas, BrazilUniv Sao Paulo, Inst Fis, BR-05314970 Sao Paulo, BrazilSao Paulo State Univ, Lab Genom Studies, UNESP, BR-15054000 Sao Jose Do Rio Preto, BrazilUniv Fed Rio de Janeiro, Inst Biofis Carlos Chagas Filho, Lab Modelagem & Dinam Mol, BR-21941901 Rio De Janeiro, BrazilIBILCE UNESP, Multiuser Ctr Biomol Innovat, BR-15054000 Sao Jose Do Rio Preto, BrazilSao Paulo State Univ, Lab Genom Studies, UNESP, BR-15054000 Sao Jose Do Rio Preto, BrazilFAPESP: 2020/13921-0FAPESP: 2020/10214-1FAPESP: 2018/07977-3FAPESP: 2020/08615-8CNPq: 309940/2019-2MdpiUniversidade Estadual Paulista (UNESP)Brazilian Ctr Res Energy & Mat CNPEMUniversidade Estadual de Campinas (UNICAMP)Universidade de São Paulo (USP)Universidade Federal do Rio de Janeiro (UFRJ)Gismene, Carolina [UNESP]Gonzalez, Jorge Enrique Hernandez [UNESP]Santisteban, Angela Rocio Nino [UNESP]Nascimento, Andrey Fabricio ZiemCunha, Lucas dos SantosMoraes, Fabio Rogerio de [UNESP]Oliveira, Cristiano Luis Pinto deOliveira, Caio C.Provazzi, Paola Jocelan Scarin[UNESP]Pascutti, Pedro GeraldoArni, Raghuvir Krishnaswamy [UNESP]Mariutti, Ricardo Barros [UNESP]2022-11-30T13:47:54Z2022-11-30T13:47:54Z2022-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article20http://dx.doi.org/10.3390/ijms23179857International Journal Of Molecular Sciences. Basel: Mdpi, v. 23, n. 17, 20 p., 2022.1422-0067http://hdl.handle.net/11449/23789710.3390/ijms23179857WOS:000851108300001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengInternational Journal Of Molecular Sciencesinfo:eu-repo/semantics/openAccess2022-11-30T13:47:54Zoai:repositorio.unesp.br:11449/237897Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-11-30T13:47:54Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
title Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
spellingShingle Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
Gismene, Carolina [UNESP]
Staphylococcal exfoliative toxin E
Proline flip
Homodimerization
X-ray diffraction
Molecular dynamics
title_short Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
title_full Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
title_fullStr Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
title_full_unstemmed Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
title_sort Staphylococcus aureus Exfoliative Toxin E, Oligomeric State and Flip of P186: Implications for Its Action Mechanism
author Gismene, Carolina [UNESP]
author_facet Gismene, Carolina [UNESP]
Gonzalez, Jorge Enrique Hernandez [UNESP]
Santisteban, Angela Rocio Nino [UNESP]
Nascimento, Andrey Fabricio Ziem
Cunha, Lucas dos Santos
Moraes, Fabio Rogerio de [UNESP]
Oliveira, Cristiano Luis Pinto de
Oliveira, Caio C.
Provazzi, Paola Jocelan Scarin[UNESP]
Pascutti, Pedro Geraldo
Arni, Raghuvir Krishnaswamy [UNESP]
Mariutti, Ricardo Barros [UNESP]
author_role author
author2 Gonzalez, Jorge Enrique Hernandez [UNESP]
Santisteban, Angela Rocio Nino [UNESP]
Nascimento, Andrey Fabricio Ziem
Cunha, Lucas dos Santos
Moraes, Fabio Rogerio de [UNESP]
Oliveira, Cristiano Luis Pinto de
Oliveira, Caio C.
Provazzi, Paola Jocelan Scarin[UNESP]
Pascutti, Pedro Geraldo
Arni, Raghuvir Krishnaswamy [UNESP]
Mariutti, Ricardo Barros [UNESP]
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
Brazilian Ctr Res Energy & Mat CNPEM
Universidade Estadual de Campinas (UNICAMP)
Universidade de São Paulo (USP)
Universidade Federal do Rio de Janeiro (UFRJ)
dc.contributor.author.fl_str_mv Gismene, Carolina [UNESP]
Gonzalez, Jorge Enrique Hernandez [UNESP]
Santisteban, Angela Rocio Nino [UNESP]
Nascimento, Andrey Fabricio Ziem
Cunha, Lucas dos Santos
Moraes, Fabio Rogerio de [UNESP]
Oliveira, Cristiano Luis Pinto de
Oliveira, Caio C.
Provazzi, Paola Jocelan Scarin[UNESP]
Pascutti, Pedro Geraldo
Arni, Raghuvir Krishnaswamy [UNESP]
Mariutti, Ricardo Barros [UNESP]
dc.subject.por.fl_str_mv Staphylococcal exfoliative toxin E
Proline flip
Homodimerization
X-ray diffraction
Molecular dynamics
topic Staphylococcal exfoliative toxin E
Proline flip
Homodimerization
X-ray diffraction
Molecular dynamics
description Staphylococcal exfoliative toxins (ETs) are glutamyl endopeptidases that specifically cleave the Glu381-Gly382 bond in the ectodomains of desmoglein 1 (Dsg1) via complex action mechanisms. To date, four ETs have been identified in different Staphylococcus aureus strains and ETE is the most recently characterized. The unusual properties of ETs have been attributed to a unique structural feature, i.e., the 180 degrees flip of the carbonyl oxygen (O) of the nonconserved residue 192/186 (ETA/ETE numbering), not conducive to the oxyanion hole formation. We report the crystal structure of ETE determined at 1.61 angstrom resolution, in which P186(O) adopts two conformations displaying a 180 degrees rotation. This finding, together with free energy calculations, supports the existence of a dynamic transition between the conformations under the tested conditions. Moreover, enzymatic assays showed no significant differences in the esterolytic efficiency of ETE and ETE/P186G, a mutant predicted to possess a functional oxyanion hole, thus downplaying the influence of the flip on the activity. Finally, we observed the formation of ETE homodimers in solution and the predicted homodimeric structure revealed the participation of a characteristic nonconserved loop in the interface and the partial occlusion of the protein active site, suggesting that monomerization is required for enzymatic activity.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-30T13:47:54Z
2022-11-30T13:47:54Z
2022-09-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/ijms23179857
International Journal Of Molecular Sciences. Basel: Mdpi, v. 23, n. 17, 20 p., 2022.
1422-0067
http://hdl.handle.net/11449/237897
10.3390/ijms23179857
WOS:000851108300001
url http://dx.doi.org/10.3390/ijms23179857
http://hdl.handle.net/11449/237897
identifier_str_mv International Journal Of Molecular Sciences. Basel: Mdpi, v. 23, n. 17, 20 p., 2022.
1422-0067
10.3390/ijms23179857
WOS:000851108300001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv International Journal Of Molecular Sciences
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 20
dc.publisher.none.fl_str_mv Mdpi
publisher.none.fl_str_mv Mdpi
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
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instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
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repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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