Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema

Detalhes bibliográficos
Autor(a) principal: Povh, Jayme Aparecido
Data de Publicação: 2011
Outros Autores: Ribeiro, Ricardo Pereira, Lopera-Barrero, Nelson Mauricio, Jacometo, Carolina Bespalhok, Vargas, Lauro, Gomes, Patrícia Cristina, Lopes, Taís da Silva
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: https://www.revistas.usp.br/sa/article/view/22671
Resumo: Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.
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spelling Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil Piaractus mesopotamicusgenetic variabilityhatchery stationsmolecular markersPiaractus mesopotamicusvariabilidade genéticaestação de pisciculturamarcadores moleculares Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations. O monitoramento da diversidade genética é fundamental em um programa de repovoamento. Avaliouse a diversidade genética de pacu Piaractus mesopotamicus (Holmberg, 1887) em duas estações de piscicultura em Andirá -Paraná, Brasil, utilizadas no programa de repovoamento do Rio Paranapanema. Foram amplificados seis loci microssatélite para avaliar 60 amostras de nadadeira. O estoque de reprodutores B apresentou maior número de alelos e heterozigose (alelos: 22 e H O: 0,628) que o estoque de reprodutores A (alelos: 21 e H O: 0,600). Alelos com baixos níveis de frequência foram observados nos dois estoques. Os coeficientes positivos de endogamia no locus Pme2 (estoque A: F IS = 0,30 e estoque B: F IS = 0,20), Pme5 (estoque B: F IS = 0,15), Pme14 (estoque A: F IS = 0,07) e Pme28 (estoque A: F IS = 0,24 e estoque B: F IS = 0,20), indicaram deficiência de heterozigotos. Foi detectada a presença de um alelo nulo no lócus Pme2. As estimativas negativas nos loci Pme4 (estoque A: F IS = -0,43 e estoque B: F IS= -0,37), Pme5 (estoque A: F IS = - 0,11), Pme14 (estoque B: F IS = - 0,15) e Pme32 (estoque A: F IS = - 0,93 e estoque B: F IS = - 0,60) foram indicativas de excesso de heterozigotos. Foi evidenciado desequilíbrio de ligação e riqueza alélica baixa só no estoque A. A diversidade genética de Nei foi alta nos dois estoques. A distância (0,085) e identidade (0,918) genética mostraram similaridade entre os estoques, o qual reflete uma possível origem comum. 6,05% da variância genética total foi devida a diferenças entre os estoques. Foi observado um recente efeito gargalo nos dois estoques. Os resultados indicaram uma alta diversidade genética nos estoques de reprodutores e baixa diferenciação genética entre eles, o que foi causado pelo manejo reprodutivo das pisciculturas, redução do tamanho populacional e intercâmbio genético entre as pisciculturas. Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz2011-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://www.revistas.usp.br/sa/article/view/2267110.1590/S0103-90162011000300006Scientia Agricola; v. 68 n. 3 (2011); 308-313Scientia Agricola; Vol. 68 No. 3 (2011); 308-313Scientia Agricola; Vol. 68 Núm. 3 (2011); 308-3131678-992X0103-9016reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USPenghttps://www.revistas.usp.br/sa/article/view/22671/24695Copyright (c) 2015 Scientia Agricolainfo:eu-repo/semantics/openAccessPovh, Jayme AparecidoRibeiro, Ricardo PereiraLopera-Barrero, Nelson MauricioJacometo, Carolina BespalhokVargas, LauroGomes, Patrícia CristinaLopes, Taís da Silva2015-07-07T19:08:07Zoai:revistas.usp.br:article/22671Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2015-07-07T19:08:07Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
spellingShingle Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
Povh, Jayme Aparecido
Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
Piaractus mesopotamicus
variabilidade genética
estação de piscicultura
marcadores moleculares
title_short Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
title_full Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
title_fullStr Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
title_full_unstemmed Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
title_sort Análise microssatélite de estoques de reprodutores de pacu utilizados no programa de repovoamento do rio Paranapanema
author Povh, Jayme Aparecido
author_facet Povh, Jayme Aparecido
Ribeiro, Ricardo Pereira
Lopera-Barrero, Nelson Mauricio
Jacometo, Carolina Bespalhok
Vargas, Lauro
Gomes, Patrícia Cristina
Lopes, Taís da Silva
author_role author
author2 Ribeiro, Ricardo Pereira
Lopera-Barrero, Nelson Mauricio
Jacometo, Carolina Bespalhok
Vargas, Lauro
Gomes, Patrícia Cristina
Lopes, Taís da Silva
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Povh, Jayme Aparecido
Ribeiro, Ricardo Pereira
Lopera-Barrero, Nelson Mauricio
Jacometo, Carolina Bespalhok
Vargas, Lauro
Gomes, Patrícia Cristina
Lopes, Taís da Silva
dc.subject.por.fl_str_mv Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
Piaractus mesopotamicus
variabilidade genética
estação de piscicultura
marcadores moleculares
topic Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
Piaractus mesopotamicus
variabilidade genética
estação de piscicultura
marcadores moleculares
description Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.
publishDate 2011
dc.date.none.fl_str_mv 2011-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://www.revistas.usp.br/sa/article/view/22671
10.1590/S0103-90162011000300006
url https://www.revistas.usp.br/sa/article/view/22671
identifier_str_mv 10.1590/S0103-90162011000300006
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://www.revistas.usp.br/sa/article/view/22671/24695
dc.rights.driver.fl_str_mv Copyright (c) 2015 Scientia Agricola
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Copyright (c) 2015 Scientia Agricola
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
publisher.none.fl_str_mv Universidade de São Paulo. Escola Superior de Agricultura Luiz de Queiroz
dc.source.none.fl_str_mv Scientia Agricola; v. 68 n. 3 (2011); 308-313
Scientia Agricola; Vol. 68 No. 3 (2011); 308-313
Scientia Agricola; Vol. 68 Núm. 3 (2011); 308-313
1678-992X
0103-9016
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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