Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil

Detalhes bibliográficos
Autor(a) principal: Povh,Jayme Aparecido
Data de Publicação: 2011
Outros Autores: Ribeiro,Ricardo Pereira, Lopera-Barrero,Nelson Mauricio, Jacometo,Carolina Bespalhok, Vargas,Lauro, Gomes,Patrícia Cristina, Lopes,Taís da Silva
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Scientia Agrícola (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006
Resumo: Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.
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spelling Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, BrazilPiaractus mesopotamicusgenetic variabilityhatchery stationsmolecular markersMonitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.Escola Superior de Agricultura "Luiz de Queiroz"2011-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006Scientia Agricola v.68 n.3 2011reponame:Scientia Agrícola (Online)instname:Universidade de São Paulo (USP)instacron:USP10.1590/S0103-90162011000300006info:eu-repo/semantics/openAccessPovh,Jayme AparecidoRibeiro,Ricardo PereiraLopera-Barrero,Nelson MauricioJacometo,Carolina BespalhokVargas,LauroGomes,Patrícia CristinaLopes,Taís da Silvaeng2011-07-11T00:00:00Zoai:scielo:S0103-90162011000300006Revistahttp://revistas.usp.br/sa/indexPUBhttps://old.scielo.br/oai/scielo-oai.phpscientia@usp.br||alleoni@usp.br1678-992X0103-9016opendoar:2011-07-11T00:00Scientia Agrícola (Online) - Universidade de São Paulo (USP)false
dc.title.none.fl_str_mv Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
spellingShingle Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
Povh,Jayme Aparecido
Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
title_short Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title_full Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title_fullStr Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title_full_unstemmed Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
title_sort Microsatellite analysis of pacu broodstocks used in the stocking program of Paranapanema River, Brazil
author Povh,Jayme Aparecido
author_facet Povh,Jayme Aparecido
Ribeiro,Ricardo Pereira
Lopera-Barrero,Nelson Mauricio
Jacometo,Carolina Bespalhok
Vargas,Lauro
Gomes,Patrícia Cristina
Lopes,Taís da Silva
author_role author
author2 Ribeiro,Ricardo Pereira
Lopera-Barrero,Nelson Mauricio
Jacometo,Carolina Bespalhok
Vargas,Lauro
Gomes,Patrícia Cristina
Lopes,Taís da Silva
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Povh,Jayme Aparecido
Ribeiro,Ricardo Pereira
Lopera-Barrero,Nelson Mauricio
Jacometo,Carolina Bespalhok
Vargas,Lauro
Gomes,Patrícia Cristina
Lopes,Taís da Silva
dc.subject.por.fl_str_mv Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
topic Piaractus mesopotamicus
genetic variability
hatchery stations
molecular markers
description Monitoring the genetic diversity has fundamental importance for fish stocking programs. This experiment aims to evaluate the genetic diversity in two hatchery stations (A and B) with pacu Piaractus mesopotamicus (Holmberg, 1887) in Andirá, state of Paraná, Brazil used in stocking programs of Paranapanema River. Six microsatellite loci were amplified using DNA extracted from 60 fin-clipping samples. The broodstock B had the average number of alleles and the mean heterozygosity (alleles: 3.7 and H O: 0.628) higher than the broodstock A (alleles: 3.5 and H O: 0.600). Alleles with low frequency levels were observed in the both broodstocks. The positive coefficients of endogamy in the locus Pme2 (broodstock A: F IS = 0.30 and broodstock B: F IS = 0.20), Pme5 (broodstock B: F IS = 0.15), Pme14 (broodstock A: F IS = 0.07) and Pme28 (broodstock A: F IS = 0.24 and broodstock B: F IS = 0.20) indicated deficiency of heterozygotes. Presence of null allele in the locus Pme2 was detected. The negative estimates in loci Pme4 (broodstock A: F IS = - 0.43 and broodstock B: F IS = - 0.37), Pme5 (broodstock A: F IS= - 0.11), Pme14 (broodstock B: F IS= - 0.15) and Pme32 (broodstock A: F IS = - 0.93 and broodstock B: F IS = - 0.60) were indicating the excess of heterozygotes. Evidence of linkage disequilibrium and lower allelic richness was found only in the broodstock A. Nei's gene diversity was high in both broodstocks. The genetic distance (0.085) and identity (0.918) showed similarity between broodstocks, which reflects a possible common origin. 6.05% of the total genetic variance was due to differences among broodstocks. Recent bottleneck effect in two broodstocks was observed. The results indicated a higher genetic diversity in the two broodstocks and they presented low genetic difference. This was caused by the reproductive management in both hatchery stations, reduction of population size and genetic exchange between the hatchery stations.
publishDate 2011
dc.date.none.fl_str_mv 2011-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0103-90162011000300006
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0103-90162011000300006
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
publisher.none.fl_str_mv Escola Superior de Agricultura "Luiz de Queiroz"
dc.source.none.fl_str_mv Scientia Agricola v.68 n.3 2011
reponame:Scientia Agrícola (Online)
instname:Universidade de São Paulo (USP)
instacron:USP
instname_str Universidade de São Paulo (USP)
instacron_str USP
institution USP
reponame_str Scientia Agrícola (Online)
collection Scientia Agrícola (Online)
repository.name.fl_str_mv Scientia Agrícola (Online) - Universidade de São Paulo (USP)
repository.mail.fl_str_mv scientia@usp.br||alleoni@usp.br
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