Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB

Detalhes bibliográficos
Autor(a) principal: JOSEPH,JEAN B.
Data de Publicação: 2022
Outros Autores: RIBEIRO,PAULO MARCELO V., GUIMARÃES,LEONARDO J.N., CHAVES JUNIOR,CICERO VITOR, TEIXEIRA,JONATHAN DA C.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Anais da Academia Brasileira de Ciências (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652022000801702
Resumo: Abstract Large-scale fluid flow in porous media demands intense computations and occurs in the most diverse applications, including groundwater flow and oil recovery. This article presents novel computational strategies applied to reservoir geomechanics. Advances are proposed for the efficient assembly of finite element matrices and the solution of linear systems using highly vectorized code in MATLAB. In the CPU version, element matrix assembly is performed using conventional vectorization procedures, based on two strategies: the explicit matrices, and the multidimensional products. Further assembly of the global sparse matrix is achieved using the native sparse function. For the GPU version, computation of the complete set of element matrices is performed with the same strategies as the CPU approach, using gpuArray structures and the native CUDA support provided by MATLAB Parallel Computing Toolbox. Solution of the resulting linear system in CPU and GPU versions is obtained with two strategies using a one-way approach: the native conjugate gradient solver (pcg), and the one provided by the Eigen library. A broad discussion is presented in a dedicated benchmark, where the different strategies using CPU and GPU are compared in processing time and memory requirements. These analyses present significant speedups over serial codes.
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spelling Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLABComputational efficiencyexplicit matrixfinite elementsgeomechanical problemGPU programmingsparse stiffness matricesAbstract Large-scale fluid flow in porous media demands intense computations and occurs in the most diverse applications, including groundwater flow and oil recovery. This article presents novel computational strategies applied to reservoir geomechanics. Advances are proposed for the efficient assembly of finite element matrices and the solution of linear systems using highly vectorized code in MATLAB. In the CPU version, element matrix assembly is performed using conventional vectorization procedures, based on two strategies: the explicit matrices, and the multidimensional products. Further assembly of the global sparse matrix is achieved using the native sparse function. For the GPU version, computation of the complete set of element matrices is performed with the same strategies as the CPU approach, using gpuArray structures and the native CUDA support provided by MATLAB Parallel Computing Toolbox. Solution of the resulting linear system in CPU and GPU versions is obtained with two strategies using a one-way approach: the native conjugate gradient solver (pcg), and the one provided by the Eigen library. A broad discussion is presented in a dedicated benchmark, where the different strategies using CPU and GPU are compared in processing time and memory requirements. These analyses present significant speedups over serial codes.Academia Brasileira de Ciências2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0001-37652022000801702Anais da Academia Brasileira de Ciências v.94 suppl.4 2022reponame:Anais da Academia Brasileira de Ciências (Online)instname:Academia Brasileira de Ciências (ABC)instacron:ABC10.1590/0001-3765202220211024info:eu-repo/semantics/openAccessJOSEPH,JEAN B.RIBEIRO,PAULO MARCELO V.GUIMARÃES,LEONARDO J.N.CHAVES JUNIOR,CICERO VITORTEIXEIRA,JONATHAN DA C.eng2022-12-16T00:00:00Zoai:scielo:S0001-37652022000801702Revistahttp://www.scielo.br/aabchttps://old.scielo.br/oai/scielo-oai.php||aabc@abc.org.br1678-26900001-3765opendoar:2022-12-16T00:00Anais da Academia Brasileira de Ciências (Online) - Academia Brasileira de Ciências (ABC)false
dc.title.none.fl_str_mv Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
title Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
spellingShingle Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
JOSEPH,JEAN B.
Computational efficiency
explicit matrix
finite elements
geomechanical problem
GPU programming
sparse stiffness matrices
title_short Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
title_full Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
title_fullStr Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
title_full_unstemmed Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
title_sort Acceleration strategies for Tridimensional Coupled hydromechanical problems based on CPU and GPU programming in MATLAB
author JOSEPH,JEAN B.
author_facet JOSEPH,JEAN B.
RIBEIRO,PAULO MARCELO V.
GUIMARÃES,LEONARDO J.N.
CHAVES JUNIOR,CICERO VITOR
TEIXEIRA,JONATHAN DA C.
author_role author
author2 RIBEIRO,PAULO MARCELO V.
GUIMARÃES,LEONARDO J.N.
CHAVES JUNIOR,CICERO VITOR
TEIXEIRA,JONATHAN DA C.
author2_role author
author
author
author
dc.contributor.author.fl_str_mv JOSEPH,JEAN B.
RIBEIRO,PAULO MARCELO V.
GUIMARÃES,LEONARDO J.N.
CHAVES JUNIOR,CICERO VITOR
TEIXEIRA,JONATHAN DA C.
dc.subject.por.fl_str_mv Computational efficiency
explicit matrix
finite elements
geomechanical problem
GPU programming
sparse stiffness matrices
topic Computational efficiency
explicit matrix
finite elements
geomechanical problem
GPU programming
sparse stiffness matrices
description Abstract Large-scale fluid flow in porous media demands intense computations and occurs in the most diverse applications, including groundwater flow and oil recovery. This article presents novel computational strategies applied to reservoir geomechanics. Advances are proposed for the efficient assembly of finite element matrices and the solution of linear systems using highly vectorized code in MATLAB. In the CPU version, element matrix assembly is performed using conventional vectorization procedures, based on two strategies: the explicit matrices, and the multidimensional products. Further assembly of the global sparse matrix is achieved using the native sparse function. For the GPU version, computation of the complete set of element matrices is performed with the same strategies as the CPU approach, using gpuArray structures and the native CUDA support provided by MATLAB Parallel Computing Toolbox. Solution of the resulting linear system in CPU and GPU versions is obtained with two strategies using a one-way approach: the native conjugate gradient solver (pcg), and the one provided by the Eigen library. A broad discussion is presented in a dedicated benchmark, where the different strategies using CPU and GPU are compared in processing time and memory requirements. These analyses present significant speedups over serial codes.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/0001-3765202220211024
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.publisher.none.fl_str_mv Academia Brasileira de Ciências
publisher.none.fl_str_mv Academia Brasileira de Ciências
dc.source.none.fl_str_mv Anais da Academia Brasileira de Ciências v.94 suppl.4 2022
reponame:Anais da Academia Brasileira de Ciências (Online)
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