Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
Autor(a) principal: | |
---|---|
Data de Publicação: | 2011 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Brazilian Journal of Infectious Diseases |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004 |
Resumo: | OBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers. |
id |
BSID-1_5326b417bdc6a69dc41bd021bdcd8415 |
---|---|
oai_identifier_str |
oai:scielo:S1413-86702011000300004 |
network_acronym_str |
BSID-1 |
network_name_str |
Brazilian Journal of Infectious Diseases |
repository_id_str |
|
spelling |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasisleishmaniasispolymerase chain reactionLeishmaniaDNA primersOBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers.Brazilian Society of Infectious Diseases2011-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004Brazilian Journal of Infectious Diseases v.15 n.3 2011reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1590/S1413-86702011000300004info:eu-repo/semantics/openAccessOliveira,Diego Molina deLonardoni,Maria Valdrinez CampanaTeodoro,UesleiSilveira,Thais Gomes Verzignassieng2011-06-06T00:00:00Zoai:scielo:S1413-86702011000300004Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2011-06-06T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false |
dc.title.none.fl_str_mv |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
title |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
spellingShingle |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis Oliveira,Diego Molina de leishmaniasis polymerase chain reaction Leishmania DNA primers |
title_short |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
title_full |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
title_fullStr |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
title_full_unstemmed |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
title_sort |
Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis |
author |
Oliveira,Diego Molina de |
author_facet |
Oliveira,Diego Molina de Lonardoni,Maria Valdrinez Campana Teodoro,Ueslei Silveira,Thais Gomes Verzignassi |
author_role |
author |
author2 |
Lonardoni,Maria Valdrinez Campana Teodoro,Ueslei Silveira,Thais Gomes Verzignassi |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Oliveira,Diego Molina de Lonardoni,Maria Valdrinez Campana Teodoro,Ueslei Silveira,Thais Gomes Verzignassi |
dc.subject.por.fl_str_mv |
leishmaniasis polymerase chain reaction Leishmania DNA primers |
topic |
leishmaniasis polymerase chain reaction Leishmania DNA primers |
description |
OBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-06-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S1413-86702011000300004 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Brazilian Society of Infectious Diseases |
publisher.none.fl_str_mv |
Brazilian Society of Infectious Diseases |
dc.source.none.fl_str_mv |
Brazilian Journal of Infectious Diseases v.15 n.3 2011 reponame:Brazilian Journal of Infectious Diseases instname:Brazilian Society of Infectious Diseases (BSID) instacron:BSID |
instname_str |
Brazilian Society of Infectious Diseases (BSID) |
instacron_str |
BSID |
institution |
BSID |
reponame_str |
Brazilian Journal of Infectious Diseases |
collection |
Brazilian Journal of Infectious Diseases |
repository.name.fl_str_mv |
Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID) |
repository.mail.fl_str_mv |
bjid@bjid.org.br||lgoldani@ufrgs.br |
_version_ |
1754209241600622592 |