Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis

Detalhes bibliográficos
Autor(a) principal: Oliveira,Diego Molina de
Data de Publicação: 2011
Outros Autores: Lonardoni,Maria Valdrinez Campana, Teodoro,Ueslei, Silveira,Thais Gomes Verzignassi
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Infectious Diseases
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004
Resumo: OBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers.
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spelling Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasisleishmaniasispolymerase chain reactionLeishmaniaDNA primersOBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers.Brazilian Society of Infectious Diseases2011-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004Brazilian Journal of Infectious Diseases v.15 n.3 2011reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1590/S1413-86702011000300004info:eu-repo/semantics/openAccessOliveira,Diego Molina deLonardoni,Maria Valdrinez CampanaTeodoro,UesleiSilveira,Thais Gomes Verzignassieng2011-06-06T00:00:00Zoai:scielo:S1413-86702011000300004Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2011-06-06T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false
dc.title.none.fl_str_mv Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
title Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
spellingShingle Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
Oliveira,Diego Molina de
leishmaniasis
polymerase chain reaction
Leishmania
DNA primers
title_short Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
title_full Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
title_fullStr Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
title_full_unstemmed Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
title_sort Comparison of different primes for PCR-based diagnosis of cutaneous leishmaniasis
author Oliveira,Diego Molina de
author_facet Oliveira,Diego Molina de
Lonardoni,Maria Valdrinez Campana
Teodoro,Ueslei
Silveira,Thais Gomes Verzignassi
author_role author
author2 Lonardoni,Maria Valdrinez Campana
Teodoro,Ueslei
Silveira,Thais Gomes Verzignassi
author2_role author
author
author
dc.contributor.author.fl_str_mv Oliveira,Diego Molina de
Lonardoni,Maria Valdrinez Campana
Teodoro,Ueslei
Silveira,Thais Gomes Verzignassi
dc.subject.por.fl_str_mv leishmaniasis
polymerase chain reaction
Leishmania
DNA primers
topic leishmaniasis
polymerase chain reaction
Leishmania
DNA primers
description OBJECTIVE: The objective of this study was to analyze different primers that are commonly used in epidemiological studies for the detection of Leishmania DNA by PCR, and to compare them to the conventional direct parasite search for American cutaneous leishmaniasis (ACL) diagnosis. MATERIAL AND METHODS: Five pairs of primers, four of them derived from Leishmania kDNA sequences (MP3H-MP1L; B1-B2; LBF1-LBR1; 13A-13B), and one derived from the SL RNA (mini-exon) gene repeat (LU5A-LB3C), reported previously, were used. RESULTS: The MP3H-MP1L primers were the best at amplifying the DNA, detecting 2 fg of Leishmania spp. DNA. The 13A-13B primers presented the worst performance, detecting 512 x 10³ fg of DNA. CONCLUSION: The wide variation in the analytical sensitivity of the primers used in the PCR, and the significant differences from the conventional method of ACL diagnosis found in this study, emphasize the importance of standardizing the PCR technique, analyzing sensitivity, and selecting suitable oligonucleotide primers.
publishDate 2011
dc.date.none.fl_str_mv 2011-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702011000300004
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S1413-86702011000300004
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
dc.source.none.fl_str_mv Brazilian Journal of Infectious Diseases v.15 n.3 2011
reponame:Brazilian Journal of Infectious Diseases
instname:Brazilian Society of Infectious Diseases (BSID)
instacron:BSID
instname_str Brazilian Society of Infectious Diseases (BSID)
instacron_str BSID
institution BSID
reponame_str Brazilian Journal of Infectious Diseases
collection Brazilian Journal of Infectious Diseases
repository.name.fl_str_mv Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)
repository.mail.fl_str_mv bjid@bjid.org.br||lgoldani@ufrgs.br
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