A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil

Detalhes bibliográficos
Autor(a) principal: Duarte,Tonya Azevedo
Data de Publicação: 2017
Outros Autores: Nery,Joilda Silva, Boechat,Neio, Pereira,Susan Martins, Simonsen,Vera, Oliveira,Martha, Gomes,Maria Gabriela Miranda, Penha-Gonçalves,Carlos, Barreto,Mauricio Lima, Barbosa,Theolis
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Brazilian Journal of Infectious Diseases
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702017000300317
Resumo: ABSTRACT Introduction: The Mycobacterium tuberculosis East African-Indian (EAI) spoligotyping family (belonging to lineage 1, Indo-Oceanic, defined by the region of deletion RD239) is distributed worldwide, but is more prevalent in Southeast Asia, India, and East Africa. Studies in Latin America have rarely identified EAI. In this study, we describe the occurrence of the EAI family in Brazil. Methods: EAI was identified in a systematic literature review of genetic diversity studies pertaining to M. tuberculosis in Brazil, as well as in a survey conducted in Salvador, Bahia, located in the northeastern region of this country. Results: The EAI6-BGD1 spoligotyping family and the EAI5 Spoligotype International Type (SIT) 1983 clade were the most frequently reported, with wide distribution of this particular clade described in Brazil. The distribution of other EAI spoligotyping patterns with broader worldwide distribution was restricted to the southeastern region of the country. Conclusions: EAI may be endemic at a low frequency in Brazil, with some clades indicating increased fitness with respect to this population.
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spelling A systematic review of East African-Indian family of Mycobacterium tuberculosis in BrazilMycobacterium tuberculosisPhylogeographyGenotypingEpidemiologyABSTRACT Introduction: The Mycobacterium tuberculosis East African-Indian (EAI) spoligotyping family (belonging to lineage 1, Indo-Oceanic, defined by the region of deletion RD239) is distributed worldwide, but is more prevalent in Southeast Asia, India, and East Africa. Studies in Latin America have rarely identified EAI. In this study, we describe the occurrence of the EAI family in Brazil. Methods: EAI was identified in a systematic literature review of genetic diversity studies pertaining to M. tuberculosis in Brazil, as well as in a survey conducted in Salvador, Bahia, located in the northeastern region of this country. Results: The EAI6-BGD1 spoligotyping family and the EAI5 Spoligotype International Type (SIT) 1983 clade were the most frequently reported, with wide distribution of this particular clade described in Brazil. The distribution of other EAI spoligotyping patterns with broader worldwide distribution was restricted to the southeastern region of the country. Conclusions: EAI may be endemic at a low frequency in Brazil, with some clades indicating increased fitness with respect to this population.Brazilian Society of Infectious Diseases2017-06-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702017000300317Brazilian Journal of Infectious Diseases v.21 n.3 2017reponame:Brazilian Journal of Infectious Diseasesinstname:Brazilian Society of Infectious Diseases (BSID)instacron:BSID10.1016/j.bjid.2017.01.005info:eu-repo/semantics/openAccessDuarte,Tonya AzevedoNery,Joilda SilvaBoechat,NeioPereira,Susan MartinsSimonsen,VeraOliveira,MarthaGomes,Maria Gabriela MirandaPenha-Gonçalves,CarlosBarreto,Mauricio LimaBarbosa,Theoliseng2017-06-19T00:00:00Zoai:scielo:S1413-86702017000300317Revistahttps://www.bjid.org.br/https://old.scielo.br/oai/scielo-oai.phpbjid@bjid.org.br||lgoldani@ufrgs.br1678-43911413-8670opendoar:2017-06-19T00:00Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)false
dc.title.none.fl_str_mv A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
title A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
spellingShingle A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
Duarte,Tonya Azevedo
Mycobacterium tuberculosis
Phylogeography
Genotyping
Epidemiology
title_short A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
title_full A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
title_fullStr A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
title_full_unstemmed A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
title_sort A systematic review of East African-Indian family of Mycobacterium tuberculosis in Brazil
author Duarte,Tonya Azevedo
author_facet Duarte,Tonya Azevedo
Nery,Joilda Silva
Boechat,Neio
Pereira,Susan Martins
Simonsen,Vera
Oliveira,Martha
Gomes,Maria Gabriela Miranda
Penha-Gonçalves,Carlos
Barreto,Mauricio Lima
Barbosa,Theolis
author_role author
author2 Nery,Joilda Silva
Boechat,Neio
Pereira,Susan Martins
Simonsen,Vera
Oliveira,Martha
Gomes,Maria Gabriela Miranda
Penha-Gonçalves,Carlos
Barreto,Mauricio Lima
Barbosa,Theolis
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Duarte,Tonya Azevedo
Nery,Joilda Silva
Boechat,Neio
Pereira,Susan Martins
Simonsen,Vera
Oliveira,Martha
Gomes,Maria Gabriela Miranda
Penha-Gonçalves,Carlos
Barreto,Mauricio Lima
Barbosa,Theolis
dc.subject.por.fl_str_mv Mycobacterium tuberculosis
Phylogeography
Genotyping
Epidemiology
topic Mycobacterium tuberculosis
Phylogeography
Genotyping
Epidemiology
description ABSTRACT Introduction: The Mycobacterium tuberculosis East African-Indian (EAI) spoligotyping family (belonging to lineage 1, Indo-Oceanic, defined by the region of deletion RD239) is distributed worldwide, but is more prevalent in Southeast Asia, India, and East Africa. Studies in Latin America have rarely identified EAI. In this study, we describe the occurrence of the EAI family in Brazil. Methods: EAI was identified in a systematic literature review of genetic diversity studies pertaining to M. tuberculosis in Brazil, as well as in a survey conducted in Salvador, Bahia, located in the northeastern region of this country. Results: The EAI6-BGD1 spoligotyping family and the EAI5 Spoligotype International Type (SIT) 1983 clade were the most frequently reported, with wide distribution of this particular clade described in Brazil. The distribution of other EAI spoligotyping patterns with broader worldwide distribution was restricted to the southeastern region of the country. Conclusions: EAI may be endemic at a low frequency in Brazil, with some clades indicating increased fitness with respect to this population.
publishDate 2017
dc.date.none.fl_str_mv 2017-06-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702017000300317
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1413-86702017000300317
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1016/j.bjid.2017.01.005
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
publisher.none.fl_str_mv Brazilian Society of Infectious Diseases
dc.source.none.fl_str_mv Brazilian Journal of Infectious Diseases v.21 n.3 2017
reponame:Brazilian Journal of Infectious Diseases
instname:Brazilian Society of Infectious Diseases (BSID)
instacron:BSID
instname_str Brazilian Society of Infectious Diseases (BSID)
instacron_str BSID
institution BSID
reponame_str Brazilian Journal of Infectious Diseases
collection Brazilian Journal of Infectious Diseases
repository.name.fl_str_mv Brazilian Journal of Infectious Diseases - Brazilian Society of Infectious Diseases (BSID)
repository.mail.fl_str_mv bjid@bjid.org.br||lgoldani@ufrgs.br
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