‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Crop Breeding and Applied Biotechnology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400 |
Resumo: | Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis. |
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Crop Breeding and Applied Biotechnology |
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‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid speciesBulk samplingunlinked lociallelic frequencies.Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis.Crop Breeding and Applied Biotechnology2020-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400Crop Breeding and Applied Biotechnology v.20 n.1 2020reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332020v20n1s9info:eu-repo/semantics/openAccessPorta,BettinaFernández,PeterGalván,Guillermo A.Priano,Federico Condóneng2020-03-20T00:00:00Zoai:scielo:S1984-70332020000100400Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2020-03-20T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse |
dc.title.none.fl_str_mv |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
title |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
spellingShingle |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species Porta,Bettina Bulk sampling unlinked loci allelic frequencies. |
title_short |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
title_full |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
title_fullStr |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
title_full_unstemmed |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
title_sort |
‘Gametes Simulator’: a multilocus genotype simulator to analyze genetic structure in outbreeding diploid species |
author |
Porta,Bettina |
author_facet |
Porta,Bettina Fernández,Peter Galván,Guillermo A. Priano,Federico Condón |
author_role |
author |
author2 |
Fernández,Peter Galván,Guillermo A. Priano,Federico Condón |
author2_role |
author author author |
dc.contributor.author.fl_str_mv |
Porta,Bettina Fernández,Peter Galván,Guillermo A. Priano,Federico Condón |
dc.subject.por.fl_str_mv |
Bulk sampling unlinked loci allelic frequencies. |
topic |
Bulk sampling unlinked loci allelic frequencies. |
description |
Abstract Bulk sampling and subsequent DNA fingerprinting are applied to obtain estimated allelic frequency data and unveil population structure for outbreeding species. We developed ‘Gametes Simulator’, a routine to simulate gametes from allelic frequencies of unlinked loci, which enables the analysis of population structure through Bayesian analysis. Based on the allelic frequencies in the populations, the software simulates the alleles per population in the right proportions and assigns one allele per marker to each gamete following Mendel’s laws that govern gametogenesis. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332020000100400 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1984-70332020v20n1s9 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
dc.source.none.fl_str_mv |
Crop Breeding and Applied Biotechnology v.20 n.1 2020 reponame:Crop Breeding and Applied Biotechnology instname:Sociedade Brasileira de Melhoramento de Plantas instacron:CBAB |
instname_str |
Sociedade Brasileira de Melhoramento de Plantas |
instacron_str |
CBAB |
institution |
CBAB |
reponame_str |
Crop Breeding and Applied Biotechnology |
collection |
Crop Breeding and Applied Biotechnology |
repository.name.fl_str_mv |
Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas |
repository.mail.fl_str_mv |
cbabjournal@gmail.com||cbab@ufv.br |
_version_ |
1754209188049846272 |