Statistical significance, selection accuracy, and experimental precision in plant breeding

Detalhes bibliográficos
Autor(a) principal: Resende,Marcos Deon Vilela de
Data de Publicação: 2022
Outros Autores: Alves,Rodrigo Silva
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Crop Breeding and Applied Biotechnology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203
Resumo: Abstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values.
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spelling Statistical significance, selection accuracy, and experimental precision in plant breedingEnhancing breeding efficacyexperimental statisticsmixed modelsnumber of repetitionsnumber of trialsAbstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values.Crop Breeding and Applied Biotechnology2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203Crop Breeding and Applied Biotechnology v.22 n.3 2022reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332022v22n3a31info:eu-repo/semantics/openAccessResende,Marcos Deon Vilela deAlves,Rodrigo Silvaeng2022-10-24T00:00:00Zoai:scielo:S1984-70332022000300203Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2022-10-24T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse
dc.title.none.fl_str_mv Statistical significance, selection accuracy, and experimental precision in plant breeding
title Statistical significance, selection accuracy, and experimental precision in plant breeding
spellingShingle Statistical significance, selection accuracy, and experimental precision in plant breeding
Resende,Marcos Deon Vilela de
Enhancing breeding efficacy
experimental statistics
mixed models
number of repetitions
number of trials
title_short Statistical significance, selection accuracy, and experimental precision in plant breeding
title_full Statistical significance, selection accuracy, and experimental precision in plant breeding
title_fullStr Statistical significance, selection accuracy, and experimental precision in plant breeding
title_full_unstemmed Statistical significance, selection accuracy, and experimental precision in plant breeding
title_sort Statistical significance, selection accuracy, and experimental precision in plant breeding
author Resende,Marcos Deon Vilela de
author_facet Resende,Marcos Deon Vilela de
Alves,Rodrigo Silva
author_role author
author2 Alves,Rodrigo Silva
author2_role author
dc.contributor.author.fl_str_mv Resende,Marcos Deon Vilela de
Alves,Rodrigo Silva
dc.subject.por.fl_str_mv Enhancing breeding efficacy
experimental statistics
mixed models
number of repetitions
number of trials
topic Enhancing breeding efficacy
experimental statistics
mixed models
number of repetitions
number of trials
description Abstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values.
publishDate 2022
dc.date.none.fl_str_mv 2022-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1984-70332022v22n3a31
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
dc.source.none.fl_str_mv Crop Breeding and Applied Biotechnology v.22 n.3 2022
reponame:Crop Breeding and Applied Biotechnology
instname:Sociedade Brasileira de Melhoramento de Plantas
instacron:CBAB
instname_str Sociedade Brasileira de Melhoramento de Plantas
instacron_str CBAB
institution CBAB
reponame_str Crop Breeding and Applied Biotechnology
collection Crop Breeding and Applied Biotechnology
repository.name.fl_str_mv Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas
repository.mail.fl_str_mv cbabjournal@gmail.com||cbab@ufv.br
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