Statistical significance, selection accuracy, and experimental precision in plant breeding
Autor(a) principal: | |
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Data de Publicação: | 2022 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Crop Breeding and Applied Biotechnology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203 |
Resumo: | Abstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values. |
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Crop Breeding and Applied Biotechnology |
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Statistical significance, selection accuracy, and experimental precision in plant breedingEnhancing breeding efficacyexperimental statisticsmixed modelsnumber of repetitionsnumber of trialsAbstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values.Crop Breeding and Applied Biotechnology2022-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203Crop Breeding and Applied Biotechnology v.22 n.3 2022reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332022v22n3a31info:eu-repo/semantics/openAccessResende,Marcos Deon Vilela deAlves,Rodrigo Silvaeng2022-10-24T00:00:00Zoai:scielo:S1984-70332022000300203Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2022-10-24T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse |
dc.title.none.fl_str_mv |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
title |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
spellingShingle |
Statistical significance, selection accuracy, and experimental precision in plant breeding Resende,Marcos Deon Vilela de Enhancing breeding efficacy experimental statistics mixed models number of repetitions number of trials |
title_short |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
title_full |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
title_fullStr |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
title_full_unstemmed |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
title_sort |
Statistical significance, selection accuracy, and experimental precision in plant breeding |
author |
Resende,Marcos Deon Vilela de |
author_facet |
Resende,Marcos Deon Vilela de Alves,Rodrigo Silva |
author_role |
author |
author2 |
Alves,Rodrigo Silva |
author2_role |
author |
dc.contributor.author.fl_str_mv |
Resende,Marcos Deon Vilela de Alves,Rodrigo Silva |
dc.subject.por.fl_str_mv |
Enhancing breeding efficacy experimental statistics mixed models number of repetitions number of trials |
topic |
Enhancing breeding efficacy experimental statistics mixed models number of repetitions number of trials |
description |
Abstract Genetic selection efficiency is measured by accuracy. Model selection relies on hypothesis testing with effectiveness given by statistical significance (p-value). Estimates of selection accuracy are based on variance parameters and precision. Model selection considers the amount of genetic variability and significance of effects. Questions arise as to which one to use: accuracy or p-value? We show there is a link between the two and both may be used. We derive equations for accuracy in multi-environment trials and determine numbers of repetitions and environments to reach accuracy. We propose a new methodology for accuracy classification based on p-values. This enables a better understanding of the level of accuracy being accepted when certain p-value is used. Accuracy of 90% is associated with p-value of 2%. Use of p-values up to 20% (accuracies above 50%) are acceptable to verify significance of genetic effects. Sample sizes for desired p-values are found via accuracy values. |
publishDate |
2022 |
dc.date.none.fl_str_mv |
2022-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332022000300203 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1984-70332022v22n3a31 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
dc.source.none.fl_str_mv |
Crop Breeding and Applied Biotechnology v.22 n.3 2022 reponame:Crop Breeding and Applied Biotechnology instname:Sociedade Brasileira de Melhoramento de Plantas instacron:CBAB |
instname_str |
Sociedade Brasileira de Melhoramento de Plantas |
instacron_str |
CBAB |
institution |
CBAB |
reponame_str |
Crop Breeding and Applied Biotechnology |
collection |
Crop Breeding and Applied Biotechnology |
repository.name.fl_str_mv |
Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas |
repository.mail.fl_str_mv |
cbabjournal@gmail.com||cbab@ufv.br |
_version_ |
1754209188562599936 |