MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)

Detalhes bibliográficos
Autor(a) principal: Wang,Bin
Data de Publicação: 2021
Outros Autores: Guo,Xin, Zhao,Pingjuan, Liao,Wenbin, Zeng,Changying, Li,Kai, Zhou,Yuxun, Xiao,Junhua, Ruan,Mengbin, Peng,Ming, Bai,Yang, Chen,Ye
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Crop Breeding and Applied Biotechnology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203
Resumo: Abstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava.
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spelling MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)MYBdrought resistancenatural variationcandidate association studycoexpression interaction networkAbstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava.Crop Breeding and Applied Biotechnology2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203Crop Breeding and Applied Biotechnology v.21 n.1 2021reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332021v21n1a4info:eu-repo/semantics/openAccessWang,BinGuo,XinZhao,PingjuanLiao,WenbinZeng,ChangyingLi,KaiZhou,YuxunXiao,JunhuaRuan,MengbinPeng,MingBai,YangChen,Yeeng2021-02-09T00:00:00Zoai:scielo:S1984-70332021000100203Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2021-02-09T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse
dc.title.none.fl_str_mv MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
title MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
spellingShingle MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
Wang,Bin
MYB
drought resistance
natural variation
candidate association study
coexpression interaction network
title_short MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
title_full MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
title_fullStr MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
title_full_unstemmed MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
title_sort MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
author Wang,Bin
author_facet Wang,Bin
Guo,Xin
Zhao,Pingjuan
Liao,Wenbin
Zeng,Changying
Li,Kai
Zhou,Yuxun
Xiao,Junhua
Ruan,Mengbin
Peng,Ming
Bai,Yang
Chen,Ye
author_role author
author2 Guo,Xin
Zhao,Pingjuan
Liao,Wenbin
Zeng,Changying
Li,Kai
Zhou,Yuxun
Xiao,Junhua
Ruan,Mengbin
Peng,Ming
Bai,Yang
Chen,Ye
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Wang,Bin
Guo,Xin
Zhao,Pingjuan
Liao,Wenbin
Zeng,Changying
Li,Kai
Zhou,Yuxun
Xiao,Junhua
Ruan,Mengbin
Peng,Ming
Bai,Yang
Chen,Ye
dc.subject.por.fl_str_mv MYB
drought resistance
natural variation
candidate association study
coexpression interaction network
topic MYB
drought resistance
natural variation
candidate association study
coexpression interaction network
description Abstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1984-70332021v21n1a4
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
dc.source.none.fl_str_mv Crop Breeding and Applied Biotechnology v.21 n.1 2021
reponame:Crop Breeding and Applied Biotechnology
instname:Sociedade Brasileira de Melhoramento de Plantas
instacron:CBAB
instname_str Sociedade Brasileira de Melhoramento de Plantas
instacron_str CBAB
institution CBAB
reponame_str Crop Breeding and Applied Biotechnology
collection Crop Breeding and Applied Biotechnology
repository.name.fl_str_mv Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas
repository.mail.fl_str_mv cbabjournal@gmail.com||cbab@ufv.br
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