MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Crop Breeding and Applied Biotechnology |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203 |
Resumo: | Abstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava. |
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MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz)MYBdrought resistancenatural variationcandidate association studycoexpression interaction networkAbstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava.Crop Breeding and Applied Biotechnology2021-01-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203Crop Breeding and Applied Biotechnology v.21 n.1 2021reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332021v21n1a4info:eu-repo/semantics/openAccessWang,BinGuo,XinZhao,PingjuanLiao,WenbinZeng,ChangyingLi,KaiZhou,YuxunXiao,JunhuaRuan,MengbinPeng,MingBai,YangChen,Yeeng2021-02-09T00:00:00Zoai:scielo:S1984-70332021000100203Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2021-02-09T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse |
dc.title.none.fl_str_mv |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
title |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
spellingShingle |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) Wang,Bin MYB drought resistance natural variation candidate association study coexpression interaction network |
title_short |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
title_full |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
title_fullStr |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
title_full_unstemmed |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
title_sort |
MeMYB26, a drought-responsive transcription factor in cassava (Manihot esculenta Crantz) |
author |
Wang,Bin |
author_facet |
Wang,Bin Guo,Xin Zhao,Pingjuan Liao,Wenbin Zeng,Changying Li,Kai Zhou,Yuxun Xiao,Junhua Ruan,Mengbin Peng,Ming Bai,Yang Chen,Ye |
author_role |
author |
author2 |
Guo,Xin Zhao,Pingjuan Liao,Wenbin Zeng,Changying Li,Kai Zhou,Yuxun Xiao,Junhua Ruan,Mengbin Peng,Ming Bai,Yang Chen,Ye |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Wang,Bin Guo,Xin Zhao,Pingjuan Liao,Wenbin Zeng,Changying Li,Kai Zhou,Yuxun Xiao,Junhua Ruan,Mengbin Peng,Ming Bai,Yang Chen,Ye |
dc.subject.por.fl_str_mv |
MYB drought resistance natural variation candidate association study coexpression interaction network |
topic |
MYB drought resistance natural variation candidate association study coexpression interaction network |
description |
Abstract Cassava (Manihot esculenta Crantz) is worldwide the sixth-largest food crop and highly drought resistant. The expression of the myeloblastosis (MYB) family protein MeMYB26 in cassava was previously reported to be significantly up-regulated under water deficit. To study the basic characterization, natural variations and potential functions of MeMYB26 for drought resistance in cassava, the protein was subjected to bioinformatics analysis, multiplex-PCR with next-generation sequencing and candidate association studies. The results indicated that MeMYB26 is a typical transcription factor, with two MYB DNA-binding and transcriptional activation domains. One stop-gained and five nonsynonymous variations in the genomic region of MeMYB26 were significantly associated with drought resistance traits. The results of the scale-free coexpression network showed that the MeMYB26 gene plays a critical role in plant stress resistance, growth and biomass development. It was concluded that MeMYB26 is a reliable candidate gene associated with drought tolerance and biomass storage in cassava. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332021000100203 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/1984-70332021v21n1a4 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
publisher.none.fl_str_mv |
Crop Breeding and Applied Biotechnology |
dc.source.none.fl_str_mv |
Crop Breeding and Applied Biotechnology v.21 n.1 2021 reponame:Crop Breeding and Applied Biotechnology instname:Sociedade Brasileira de Melhoramento de Plantas instacron:CBAB |
instname_str |
Sociedade Brasileira de Melhoramento de Plantas |
instacron_str |
CBAB |
institution |
CBAB |
reponame_str |
Crop Breeding and Applied Biotechnology |
collection |
Crop Breeding and Applied Biotechnology |
repository.name.fl_str_mv |
Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas |
repository.mail.fl_str_mv |
cbabjournal@gmail.com||cbab@ufv.br |
_version_ |
1754209188383293440 |