Control of plant height by 24 alleles at 12 quantitative trait loci in rice

Detalhes bibliográficos
Autor(a) principal: Zeng,Yuxiang
Data de Publicação: 2019
Outros Autores: Chen,Yuan, Ji,Zhijuan, Liang,Yan, Zheng,Anfu, Wen,Zhihua, Yang,Changdeng
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Crop Breeding and Applied Biotechnology
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332019000200200
Resumo: Abstract Plant height (PH) is controlled by quantitative trait loci (QTLs) in rice. In the present study, a recombinant inbred line population developed by crossing two rice cultivars, Lemont and Yangdao4, was grown in eight environments for QTL analysis. Multiple interval mapping detected 53 PH-QTLs, 39 of which clustered at 12 chromosome regions/putative loci. An examination of the 12 putative loci identified 24 alleles that are simultaneously involved in controlling PH. Linear regression analyses suggested that these 24 alleles function additively across the 12 loci to control PH, and plants carrying more PH-increasing alleles at the 12 loci were taller than those carrying more PH-decreasing alleles. Multiple comparison tests indicated that the effect of a single allele at the 12 loci was small and that multiple alleles must be pyramided to attain a statistically significant effect. The closest markers to the 12 loci can be used directly in marker-assisted breeding to manipulate PH.
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spelling Control of plant height by 24 alleles at 12 quantitative trait loci in ricericeplant heightQTLallelerecombinant inbred lineAbstract Plant height (PH) is controlled by quantitative trait loci (QTLs) in rice. In the present study, a recombinant inbred line population developed by crossing two rice cultivars, Lemont and Yangdao4, was grown in eight environments for QTL analysis. Multiple interval mapping detected 53 PH-QTLs, 39 of which clustered at 12 chromosome regions/putative loci. An examination of the 12 putative loci identified 24 alleles that are simultaneously involved in controlling PH. Linear regression analyses suggested that these 24 alleles function additively across the 12 loci to control PH, and plants carrying more PH-increasing alleles at the 12 loci were taller than those carrying more PH-decreasing alleles. Multiple comparison tests indicated that the effect of a single allele at the 12 loci was small and that multiple alleles must be pyramided to attain a statistically significant effect. The closest markers to the 12 loci can be used directly in marker-assisted breeding to manipulate PH.Crop Breeding and Applied Biotechnology2019-07-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332019000200200Crop Breeding and Applied Biotechnology v.19 n.2 2019reponame:Crop Breeding and Applied Biotechnologyinstname:Sociedade Brasileira de Melhoramento de Plantasinstacron:CBAB10.1590/1984-70332019v19n2a28info:eu-repo/semantics/openAccessZeng,YuxiangChen,YuanJi,ZhijuanLiang,YanZheng,AnfuWen,ZhihuaYang,Changdengeng2019-07-29T00:00:00Zoai:scielo:S1984-70332019000200200Revistahttps://cbab.sbmp.org.br/#ONGhttps://old.scielo.br/oai/scielo-oai.phpcbabjournal@gmail.com||cbab@ufv.br1984-70331518-7853opendoar:2019-07-29T00:00Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantasfalse
dc.title.none.fl_str_mv Control of plant height by 24 alleles at 12 quantitative trait loci in rice
title Control of plant height by 24 alleles at 12 quantitative trait loci in rice
spellingShingle Control of plant height by 24 alleles at 12 quantitative trait loci in rice
Zeng,Yuxiang
rice
plant height
QTL
allele
recombinant inbred line
title_short Control of plant height by 24 alleles at 12 quantitative trait loci in rice
title_full Control of plant height by 24 alleles at 12 quantitative trait loci in rice
title_fullStr Control of plant height by 24 alleles at 12 quantitative trait loci in rice
title_full_unstemmed Control of plant height by 24 alleles at 12 quantitative trait loci in rice
title_sort Control of plant height by 24 alleles at 12 quantitative trait loci in rice
author Zeng,Yuxiang
author_facet Zeng,Yuxiang
Chen,Yuan
Ji,Zhijuan
Liang,Yan
Zheng,Anfu
Wen,Zhihua
Yang,Changdeng
author_role author
author2 Chen,Yuan
Ji,Zhijuan
Liang,Yan
Zheng,Anfu
Wen,Zhihua
Yang,Changdeng
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Zeng,Yuxiang
Chen,Yuan
Ji,Zhijuan
Liang,Yan
Zheng,Anfu
Wen,Zhihua
Yang,Changdeng
dc.subject.por.fl_str_mv rice
plant height
QTL
allele
recombinant inbred line
topic rice
plant height
QTL
allele
recombinant inbred line
description Abstract Plant height (PH) is controlled by quantitative trait loci (QTLs) in rice. In the present study, a recombinant inbred line population developed by crossing two rice cultivars, Lemont and Yangdao4, was grown in eight environments for QTL analysis. Multiple interval mapping detected 53 PH-QTLs, 39 of which clustered at 12 chromosome regions/putative loci. An examination of the 12 putative loci identified 24 alleles that are simultaneously involved in controlling PH. Linear regression analyses suggested that these 24 alleles function additively across the 12 loci to control PH, and plants carrying more PH-increasing alleles at the 12 loci were taller than those carrying more PH-decreasing alleles. Multiple comparison tests indicated that the effect of a single allele at the 12 loci was small and that multiple alleles must be pyramided to attain a statistically significant effect. The closest markers to the 12 loci can be used directly in marker-assisted breeding to manipulate PH.
publishDate 2019
dc.date.none.fl_str_mv 2019-07-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332019000200200
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1984-70332019000200200
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/1984-70332019v19n2a28
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
publisher.none.fl_str_mv Crop Breeding and Applied Biotechnology
dc.source.none.fl_str_mv Crop Breeding and Applied Biotechnology v.19 n.2 2019
reponame:Crop Breeding and Applied Biotechnology
instname:Sociedade Brasileira de Melhoramento de Plantas
instacron:CBAB
instname_str Sociedade Brasileira de Melhoramento de Plantas
instacron_str CBAB
institution CBAB
reponame_str Crop Breeding and Applied Biotechnology
collection Crop Breeding and Applied Biotechnology
repository.name.fl_str_mv Crop Breeding and Applied Biotechnology - Sociedade Brasileira de Melhoramento de Plantas
repository.mail.fl_str_mv cbabjournal@gmail.com||cbab@ufv.br
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