The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/31666 |
Resumo: | Kyung J. Kwon-Chung,a John E. Bennett,a Brian L. Wickes,b Wieland Meyer,c,d Christina A. Cuomo,e Kurt R. Wollenburg,f Tihana A. Bicanic,g Elizabeth Castañeda,h Yun C. Chang,a Jianghan Chen,i Massimo Cogliati,j Françoise Dromer,k David Ellis,l Scott G. Filler,m Matthew C. Fisher,n Thomas S. Harrison,g Steven M. Holland,a Shigeru Kohno,o James W. Kronstad,p Marcia Lazera,q Stuart M. Levitz,r Michail S. Lionakis,a Robin C. May,s Popchai Ngamskulrongroj,t Peter G. Pappas,u John R. Perfect,v Volker Rickerts,w Tania C. Sorrell,d,x Thomas J. Walsh,y Peter R. Williamson,a Jianping Xu,z Adrian M. Zelazny,aa Arturo Casadevallbb Laboratory of Clinical Infectious Diseases, NIAID, NIH, Bethesda, Maryland, USAa ; University of Texas Health Science Center at San Antonio, San Antonio, Texas, USAb; Molecular Mycology Research Laboratory, University of Sydney, Sydney, Australiac ; Westmead Institute for Medical Research, Westmead, New South Wales, Australiad; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USAe; Office of Cyber Infrastructure and Computational Biology, NIAID, NIH, Bethesda, Maryland, USAf ; Institute of Infection and Immunity, St. George’s University of London, London, United Kingdomg; Colombia Instituto Nacional de Salud, Bogota, Colombiah; Mycology Center, Changzheng Hospital, Second Military Medical University, Shanghai, Chinai ; Dipartimento di Scienze Biomedicheper la Salute, Università degli Studi di Milano, Milan, Italyj ; Institut Pasteur, Molecular Mycology Unit, Paris, Francek ;School of Biological Sciences, University of Adelaide, Adelaide, Australial ; Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Los Angeles, California, USAm; Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdomn; Nagasaki University, Nagasaki, Japano; Michael Smith Laboratories, University of British Columbia, Vancouver, Canadap; Instituto Nacional de Infectologia Evandro Chagas, Fiocruz, Rio de Janeiro, Brazilq; Department of Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USAr ; Institute of Microbiology and Infection and School of Biosciences, University of Birmingham, Birmingham, United Kingdoms ; Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok, Thailandt ; Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, USAu; Duke University School of Medicine, Durham, North Carolina, USAv ; Robert Koch Institut, Berlin, Germanyw; Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Sydney, Australiax ; Departments of Medicine, Pediatrics, and Microbiology and Immunology, Weill Cornell Medicine, New York, New York, USAy ; Department of Biology, McMaster University, Hamilton, Ontario, Canada, and Hainan Medical College, Haikou, Hainan, Chinaz ; Department of Laboratory Medicine, Clinical Center, NIH, Bethesda, Maryland, USAaa; Johns Hopkins School of Medicine, Baltimore, Maryland, USAbb. |
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Kwon-Chung, Kyung J.Bennett, John E.Wickes, Brian L.Meyer, WielandCuomo, Christina A.Wollenburg, Kurt R.Bicanic, Tihana A.Castañeda, ElizabethChang, Yun C.Chen, JianghanCogliati, MassimoDromer, FrançoiseEllis, DavidFiller, Scott G.Fisher, Matthew C.Harrison, Thomas S.Holland, Steven M.Kohno, ShigeruKronstad, James W.Lazera, MarciaLevitz, Stuart M.Lionakis, Michail S.May, Robin C.Ngamskulrongroj, PopchaiPappas, Peter G.Perfect, John R.Rickerts, VolkerSorrell, Tania C.Walsh, Thomas J.Williamson, Peter R.Xu, JianpingZelazny, Adrian M.Casadevall, Arturo2019-02-15T10:59:39Z2019-02-15T10:59:39Z2017KWON-CHUNG, Kyung J. et al. The Case for adopting the “species complex” nomenclature for the etiologic agents of cryptococcosis. mSphere, v. 2, n. 1, p. 1-7, Jan./Feb. 2017.2379-5042https://www.arca.fiocruz.br/handle/icict/3166610.1128/mSphere.00357-162379-5042Kyung J. Kwon-Chung,a John E. Bennett,a Brian L. Wickes,b Wieland Meyer,c,d Christina A. Cuomo,e Kurt R. Wollenburg,f Tihana A. Bicanic,g Elizabeth Castañeda,h Yun C. Chang,a Jianghan Chen,i Massimo Cogliati,j Françoise Dromer,k David Ellis,l Scott G. Filler,m Matthew C. Fisher,n Thomas S. Harrison,g Steven M. Holland,a Shigeru Kohno,o James W. Kronstad,p Marcia Lazera,q Stuart M. Levitz,r Michail S. Lionakis,a Robin C. May,s Popchai Ngamskulrongroj,t Peter G. Pappas,u John R. Perfect,v Volker Rickerts,w Tania C. Sorrell,d,x Thomas J. Walsh,y Peter R. Williamson,a Jianping Xu,z Adrian M. Zelazny,aa Arturo Casadevallbb Laboratory of Clinical Infectious Diseases, NIAID, NIH, Bethesda, Maryland, USAa ; University of Texas Health Science Center at San Antonio, San Antonio, Texas, USAb; Molecular Mycology Research Laboratory, University of Sydney, Sydney, Australiac ; Westmead Institute for Medical Research, Westmead, New South Wales, Australiad; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USAe; Office of Cyber Infrastructure and Computational Biology, NIAID, NIH, Bethesda, Maryland, USAf ; Institute of Infection and Immunity, St. George’s University of London, London, United Kingdomg; Colombia Instituto Nacional de Salud, Bogota, Colombiah; Mycology Center, Changzheng Hospital, Second Military Medical University, Shanghai, Chinai ; Dipartimento di Scienze Biomedicheper la Salute, Università degli Studi di Milano, Milan, Italyj ; Institut Pasteur, Molecular Mycology Unit, Paris, Francek ;School of Biological Sciences, University of Adelaide, Adelaide, Australial ; Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Los Angeles, California, USAm; Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdomn; Nagasaki University, Nagasaki, Japano; Michael Smith Laboratories, University of British Columbia, Vancouver, Canadap; Instituto Nacional de Infectologia Evandro Chagas, Fiocruz, Rio de Janeiro, Brazilq; Department of Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USAr ; Institute of Microbiology and Infection and School of Biosciences, University of Birmingham, Birmingham, United Kingdoms ; Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok, Thailandt ; Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, USAu; Duke University School of Medicine, Durham, North Carolina, USAv ; Robert Koch Institut, Berlin, Germanyw; Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Sydney, Australiax ; Departments of Medicine, Pediatrics, and Microbiology and Immunology, Weill Cornell Medicine, New York, New York, USAy ; Department of Biology, McMaster University, Hamilton, Ontario, Canada, and Hainan Medical College, Haikou, Hainan, Chinaz ; Department of Laboratory Medicine, Clinical Center, NIH, Bethesda, Maryland, USAaa; Johns Hopkins School of Medicine, Baltimore, Maryland, USAbb.Marcia Lazera - Fundação Oswaldo Cruz. Instituto Nacional de Infectologia Evandro Chagas. Rio de Janeiro, RJ, Brasil.Múltipla - Ver em Notas.Cryptococcosis is a potentially lethal disease of humans/animals caused by Cryptococcus neoformans and Cryptococcus gattii. Distinction between the two species is based on phenotypic and genotypic characteristics. Recently, it was proposed that C. neoformans be divided into two species and C. gattii into five species based on a phylogenetic analysis of 115 isolates. While this proposal adds to the knowledge about the genetic diversity and population structure of cryptococcosis agents, the published genotypes of 2,606 strains have already revealed more genetic diversity than is encompassed by seven species. Naming every clade as a separate species at this juncture will lead to continuing nomenclatural instability. In the absence of biological differences between clades and no consensus about how DNA sequence alone can delineate a species, we recommend using "Cryptococcus neoformans species complex" and "C. gattii species complex" as a practical intermediate step, rather than creating more species. This strategy recognizes genetic diversity without creating confusion.engAmerican Society for MicrobiologyThe case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosisinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleCryptococcosisCryptococcus gattiCryptococcus neoformansCladeGenetic diversityNew nomenclatureSpecies complexinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; 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dc.title.pt_BR.fl_str_mv |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
title |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
spellingShingle |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis Kwon-Chung, Kyung J. Cryptococcosis Cryptococcus gatti Cryptococcus neoformans Clade Genetic diversity New nomenclature Species complex |
title_short |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
title_full |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
title_fullStr |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
title_full_unstemmed |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
title_sort |
The case for adopting the "species complex" nomenclature for the etiologic agents of cryptococcosis |
author |
Kwon-Chung, Kyung J. |
author_facet |
Kwon-Chung, Kyung J. Bennett, John E. Wickes, Brian L. Meyer, Wieland Cuomo, Christina A. Wollenburg, Kurt R. Bicanic, Tihana A. Castañeda, Elizabeth Chang, Yun C. Chen, Jianghan Cogliati, Massimo Dromer, Françoise Ellis, David Filler, Scott G. Fisher, Matthew C. Harrison, Thomas S. Holland, Steven M. Kohno, Shigeru Kronstad, James W. Lazera, Marcia Levitz, Stuart M. Lionakis, Michail S. May, Robin C. Ngamskulrongroj, Popchai Pappas, Peter G. Perfect, John R. Rickerts, Volker Sorrell, Tania C. Walsh, Thomas J. Williamson, Peter R. Xu, Jianping Zelazny, Adrian M. Casadevall, Arturo |
author_role |
author |
author2 |
Bennett, John E. Wickes, Brian L. Meyer, Wieland Cuomo, Christina A. Wollenburg, Kurt R. Bicanic, Tihana A. Castañeda, Elizabeth Chang, Yun C. Chen, Jianghan Cogliati, Massimo Dromer, Françoise Ellis, David Filler, Scott G. Fisher, Matthew C. Harrison, Thomas S. Holland, Steven M. Kohno, Shigeru Kronstad, James W. Lazera, Marcia Levitz, Stuart M. Lionakis, Michail S. May, Robin C. Ngamskulrongroj, Popchai Pappas, Peter G. Perfect, John R. Rickerts, Volker Sorrell, Tania C. Walsh, Thomas J. Williamson, Peter R. Xu, Jianping Zelazny, Adrian M. Casadevall, Arturo |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Kwon-Chung, Kyung J. Bennett, John E. Wickes, Brian L. Meyer, Wieland Cuomo, Christina A. Wollenburg, Kurt R. Bicanic, Tihana A. Castañeda, Elizabeth Chang, Yun C. Chen, Jianghan Cogliati, Massimo Dromer, Françoise Ellis, David Filler, Scott G. Fisher, Matthew C. Harrison, Thomas S. Holland, Steven M. Kohno, Shigeru Kronstad, James W. Lazera, Marcia Levitz, Stuart M. Lionakis, Michail S. May, Robin C. Ngamskulrongroj, Popchai Pappas, Peter G. Perfect, John R. Rickerts, Volker Sorrell, Tania C. Walsh, Thomas J. Williamson, Peter R. Xu, Jianping Zelazny, Adrian M. Casadevall, Arturo |
dc.subject.en.pt_BR.fl_str_mv |
Cryptococcosis Cryptococcus gatti Cryptococcus neoformans Clade Genetic diversity New nomenclature Species complex |
topic |
Cryptococcosis Cryptococcus gatti Cryptococcus neoformans Clade Genetic diversity New nomenclature Species complex |
description |
Kyung J. Kwon-Chung,a John E. Bennett,a Brian L. Wickes,b Wieland Meyer,c,d Christina A. Cuomo,e Kurt R. Wollenburg,f Tihana A. Bicanic,g Elizabeth Castañeda,h Yun C. Chang,a Jianghan Chen,i Massimo Cogliati,j Françoise Dromer,k David Ellis,l Scott G. Filler,m Matthew C. Fisher,n Thomas S. Harrison,g Steven M. Holland,a Shigeru Kohno,o James W. Kronstad,p Marcia Lazera,q Stuart M. Levitz,r Michail S. Lionakis,a Robin C. May,s Popchai Ngamskulrongroj,t Peter G. Pappas,u John R. Perfect,v Volker Rickerts,w Tania C. Sorrell,d,x Thomas J. Walsh,y Peter R. Williamson,a Jianping Xu,z Adrian M. Zelazny,aa Arturo Casadevallbb Laboratory of Clinical Infectious Diseases, NIAID, NIH, Bethesda, Maryland, USAa ; University of Texas Health Science Center at San Antonio, San Antonio, Texas, USAb; Molecular Mycology Research Laboratory, University of Sydney, Sydney, Australiac ; Westmead Institute for Medical Research, Westmead, New South Wales, Australiad; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USAe; Office of Cyber Infrastructure and Computational Biology, NIAID, NIH, Bethesda, Maryland, USAf ; Institute of Infection and Immunity, St. George’s University of London, London, United Kingdomg; Colombia Instituto Nacional de Salud, Bogota, Colombiah; Mycology Center, Changzheng Hospital, Second Military Medical University, Shanghai, Chinai ; Dipartimento di Scienze Biomedicheper la Salute, Università degli Studi di Milano, Milan, Italyj ; Institut Pasteur, Molecular Mycology Unit, Paris, Francek ;School of Biological Sciences, University of Adelaide, Adelaide, Australial ; Los Angeles Biomedical Research Institute, Harbor-UCLA Medical Center, Los Angeles, California, USAm; Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdomn; Nagasaki University, Nagasaki, Japano; Michael Smith Laboratories, University of British Columbia, Vancouver, Canadap; Instituto Nacional de Infectologia Evandro Chagas, Fiocruz, Rio de Janeiro, Brazilq; Department of Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USAr ; Institute of Microbiology and Infection and School of Biosciences, University of Birmingham, Birmingham, United Kingdoms ; Faculty of Medicine, Siriraj Hospital, Mahidol University, Bangkok, Thailandt ; Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, USAu; Duke University School of Medicine, Durham, North Carolina, USAv ; Robert Koch Institut, Berlin, Germanyw; Marie Bashir Institute for Infectious Diseases and Biosecurity, University of Sydney, Sydney, Australiax ; Departments of Medicine, Pediatrics, and Microbiology and Immunology, Weill Cornell Medicine, New York, New York, USAy ; Department of Biology, McMaster University, Hamilton, Ontario, Canada, and Hainan Medical College, Haikou, Hainan, Chinaz ; Department of Laboratory Medicine, Clinical Center, NIH, Bethesda, Maryland, USAaa; Johns Hopkins School of Medicine, Baltimore, Maryland, USAbb. |
publishDate |
2017 |
dc.date.issued.fl_str_mv |
2017 |
dc.date.accessioned.fl_str_mv |
2019-02-15T10:59:39Z |
dc.date.available.fl_str_mv |
2019-02-15T10:59:39Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
KWON-CHUNG, Kyung J. et al. The Case for adopting the “species complex” nomenclature for the etiologic agents of cryptococcosis. mSphere, v. 2, n. 1, p. 1-7, Jan./Feb. 2017. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/31666 |
dc.identifier.issn.pt_BR.fl_str_mv |
2379-5042 |
dc.identifier.doi.none.fl_str_mv |
10.1128/mSphere.00357-16 |
dc.identifier.eissn.none.fl_str_mv |
2379-5042 |
identifier_str_mv |
KWON-CHUNG, Kyung J. et al. The Case for adopting the “species complex” nomenclature for the etiologic agents of cryptococcosis. mSphere, v. 2, n. 1, p. 1-7, Jan./Feb. 2017. 2379-5042 10.1128/mSphere.00357-16 |
url |
https://www.arca.fiocruz.br/handle/icict/31666 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
American Society for Microbiology |
publisher.none.fl_str_mv |
American Society for Microbiology |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da FIOCRUZ (ARCA) instname:Fundação Oswaldo Cruz (FIOCRUZ) instacron:FIOCRUZ |
instname_str |
Fundação Oswaldo Cruz (FIOCRUZ) |
instacron_str |
FIOCRUZ |
institution |
FIOCRUZ |
reponame_str |
Repositório Institucional da FIOCRUZ (ARCA) |
collection |
Repositório Institucional da FIOCRUZ (ARCA) |
bitstream.url.fl_str_mv |
https://www.arca.fiocruz.br/bitstream/icict/31666/1/license.txt https://www.arca.fiocruz.br/bitstream/icict/31666/2/ve_Kwon-Chung_Kyung_etal_INI_2017.pdf https://www.arca.fiocruz.br/bitstream/icict/31666/3/ve_Kwon-Chung_Kyung_etal_INI_2017.pdf.txt |
bitstream.checksum.fl_str_mv |
5a560609d32a3863062d77ff32785d58 ac114d75e42ca53e6c1d7502905680e4 c141e3cbdabe7e0738857d5fd01c7e94 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ) |
repository.mail.fl_str_mv |
repositorio.arca@fiocruz.br |
_version_ |
1813008868008001536 |