Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans
Autor(a) principal: | |
---|---|
Data de Publicação: | 2016 |
Outros Autores: | , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/20442 |
Resumo: | Laboratory of Immunobiology. Department of Microbiology. Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil. |
id |
CRUZ_45c79f36f4dfe9a07dc3be1651714b1d |
---|---|
oai_identifier_str |
oai:www.arca.fiocruz.br:icict/20442 |
network_acronym_str |
CRUZ |
network_name_str |
Repositório Institucional da FIOCRUZ (ARCA) |
repository_id_str |
2135 |
spelling |
Fleith, RenataLobo, FranciscoSantos, Paula Fernandes dosRocha, MarianaBordignon, JulianoStrottmann, Daisy MariaPatricio, DanielPavanelli, Wander RogérioSarzi, Maria LoSantos, Claudia Nunes Duarte dosFerguson, BrianMansur, Daniel Santos2017-07-28T14:00:29Z2017-07-28T14:00:29Z2016FLEITH, Renata C. et al. Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans. Sci. Rep., v. 6, n. 36339, p. 1-8, 2016.2045-2322https://www.arca.fiocruz.br/handle/icict/2044210.1038/ srep36339engNature Publishing GroupVírus da DengueDengue VirusAmino Acid SequenceBase SequenceAntigen-Antibody ReactionsVirus del DengueSecuencia de AminoácidosSecuencia de BasesReacciones Antígeno-AnticuerpoSequência de AminoácidosSequência de BasesReações Antígeno-AnticorpoGenome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humansinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleLaboratory of Immunobiology. Department of Microbiology. Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil.Department of General Biology. Universidade Federal de Minas Gerais. Belo Horizonte, MG, Brazil.Laboratory of Immunobiology. Department of Microbiology, Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil.Laboratory of Immunobiology. Department of Microbiology, Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil.Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Virologia Molecular. Curitiba, PR, Brasil.Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Virologia Molecular. Curitiba, PR, Brasil.Laboratory of Immunobiology. Department of Microbiology. Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil.Department of Pathology. Universidade Estadual de Londrina. Londrina, PR, Brazil.Secretary for Health. Cambé, PR, Brazil.Fundação Oswaldo Cruz. Instituto Carlos Chagas. Laboratório de Virologia Molecular. Curitiba, PR, Brasil.Department of Pathology. University of Cambridge. Cambridge, UK.Laboratory of Immunobiology. Department of Microbiology. Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil.Targeting regions of proteins that show a high degree of structural conservation has been proposed as a method of developing immunotherapies and vaccines that may bypass the wide genetic variability of RNA viruses. Despite several attempts, a vaccine that protects evenly against the four circulating Dengue virus (DV) serotypes remains elusive. To find critical conserved amino acids in dengue viruses, 120 complete genomes of each serotype were selected at random and used to calculate conservation scores for nucleotide and amino acid sequences. The identified peptide sequences were analysed for their structural conservation and localisation using crystallographic data. The longest, surface exposed, highly conserved peptide of Envelope protein was found to correspond to amino acid residues 250 to 270. Mutation of this peptide in DV1 was lethal, since no replication of the mutant virus was detected in human cells. Antibodies against this peptide were detected in DV naturally infected patients indicating its potential antigenicity. Hence, this study has identified a highly conserved, critical peptide in DV that is a target of antibodies in infected humans.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/20442/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALGenome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans.pdfGenome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans.pdfapplication/pdf1326844https://www.arca.fiocruz.br/bitstream/icict/20442/2/Genome-wide%20analyses%20reveal%20a%20highly%20conserved%20Dengue%20virus%20envelope%20peptide%20which%20is%20critical%20for%20virus%20viability%20and%20antigenic%20in%20humans.pdfad4d1bcd614fc7bbcd39eb9cea4f54e0MD52TEXTGenome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans.pdf.txtGenome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans.pdf.txtExtracted texttext/plain31529https://www.arca.fiocruz.br/bitstream/icict/20442/3/Genome-wide%20analyses%20reveal%20a%20highly%20conserved%20Dengue%20virus%20envelope%20peptide%20which%20is%20critical%20for%20virus%20viability%20and%20antigenic%20in%20humans.pdf.txtb85fdf53a1d48a1acac7f5e9155d2302MD53icict/204422018-08-15 02:03:40.984oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352018-08-15T05:03:40Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)false |
dc.title.pt_BR.fl_str_mv |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
title |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
spellingShingle |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans Fleith, Renata Vírus da Dengue Dengue Virus Amino Acid Sequence Base Sequence Antigen-Antibody Reactions Virus del Dengue Secuencia de Aminoácidos Secuencia de Bases Reacciones Antígeno-Anticuerpo Sequência de Aminoácidos Sequência de Bases Reações Antígeno-Anticorpo |
title_short |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
title_full |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
title_fullStr |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
title_full_unstemmed |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
title_sort |
Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans |
author |
Fleith, Renata |
author_facet |
Fleith, Renata Lobo, Francisco Santos, Paula Fernandes dos Rocha, Mariana Bordignon, Juliano Strottmann, Daisy Maria Patricio, Daniel Pavanelli, Wander Rogério Sarzi, Maria Lo Santos, Claudia Nunes Duarte dos Ferguson, Brian Mansur, Daniel Santos |
author_role |
author |
author2 |
Lobo, Francisco Santos, Paula Fernandes dos Rocha, Mariana Bordignon, Juliano Strottmann, Daisy Maria Patricio, Daniel Pavanelli, Wander Rogério Sarzi, Maria Lo Santos, Claudia Nunes Duarte dos Ferguson, Brian Mansur, Daniel Santos |
author2_role |
author author author author author author author author author author author |
dc.contributor.author.fl_str_mv |
Fleith, Renata Lobo, Francisco Santos, Paula Fernandes dos Rocha, Mariana Bordignon, Juliano Strottmann, Daisy Maria Patricio, Daniel Pavanelli, Wander Rogério Sarzi, Maria Lo Santos, Claudia Nunes Duarte dos Ferguson, Brian Mansur, Daniel Santos |
dc.subject.other.pt_BR.fl_str_mv |
Vírus da Dengue |
topic |
Vírus da Dengue Dengue Virus Amino Acid Sequence Base Sequence Antigen-Antibody Reactions Virus del Dengue Secuencia de Aminoácidos Secuencia de Bases Reacciones Antígeno-Anticuerpo Sequência de Aminoácidos Sequência de Bases Reações Antígeno-Anticorpo |
dc.subject.en.pt_BR.fl_str_mv |
Dengue Virus Amino Acid Sequence Base Sequence Antigen-Antibody Reactions |
dc.subject.es.pt_BR.fl_str_mv |
Virus del Dengue Secuencia de Aminoácidos Secuencia de Bases Reacciones Antígeno-Anticuerpo |
dc.subject.decs.pt_BR.fl_str_mv |
Sequência de Aminoácidos Sequência de Bases Reações Antígeno-Anticorpo |
description |
Laboratory of Immunobiology. Department of Microbiology. Immunology and Parasitology. Universidade Federal de Santa Catarina. Florianópolis, SC, Brazil. |
publishDate |
2016 |
dc.date.issued.fl_str_mv |
2016 |
dc.date.accessioned.fl_str_mv |
2017-07-28T14:00:29Z |
dc.date.available.fl_str_mv |
2017-07-28T14:00:29Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.citation.fl_str_mv |
FLEITH, Renata C. et al. Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans. Sci. Rep., v. 6, n. 36339, p. 1-8, 2016. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/20442 |
dc.identifier.issn.pt_BR.fl_str_mv |
2045-2322 |
dc.identifier.doi.pt_BR.fl_str_mv |
10.1038/ srep36339 |
identifier_str_mv |
FLEITH, Renata C. et al. Genome-wide analyses reveal a highly conserved Dengue virus envelope peptide which is critical for virus viability and antigenic in humans. Sci. Rep., v. 6, n. 36339, p. 1-8, 2016. 2045-2322 10.1038/ srep36339 |
url |
https://www.arca.fiocruz.br/handle/icict/20442 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.publisher.none.fl_str_mv |
Nature Publishing Group |
publisher.none.fl_str_mv |
Nature Publishing Group |
dc.source.none.fl_str_mv |
reponame:Repositório Institucional da FIOCRUZ (ARCA) instname:Fundação Oswaldo Cruz (FIOCRUZ) instacron:FIOCRUZ |
instname_str |
Fundação Oswaldo Cruz (FIOCRUZ) |
instacron_str |
FIOCRUZ |
institution |
FIOCRUZ |
reponame_str |
Repositório Institucional da FIOCRUZ (ARCA) |
collection |
Repositório Institucional da FIOCRUZ (ARCA) |
bitstream.url.fl_str_mv |
https://www.arca.fiocruz.br/bitstream/icict/20442/1/license.txt https://www.arca.fiocruz.br/bitstream/icict/20442/2/Genome-wide%20analyses%20reveal%20a%20highly%20conserved%20Dengue%20virus%20envelope%20peptide%20which%20is%20critical%20for%20virus%20viability%20and%20antigenic%20in%20humans.pdf https://www.arca.fiocruz.br/bitstream/icict/20442/3/Genome-wide%20analyses%20reveal%20a%20highly%20conserved%20Dengue%20virus%20envelope%20peptide%20which%20is%20critical%20for%20virus%20viability%20and%20antigenic%20in%20humans.pdf.txt |
bitstream.checksum.fl_str_mv |
5a560609d32a3863062d77ff32785d58 ad4d1bcd614fc7bbcd39eb9cea4f54e0 b85fdf53a1d48a1acac7f5e9155d2302 |
bitstream.checksumAlgorithm.fl_str_mv |
MD5 MD5 MD5 |
repository.name.fl_str_mv |
Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ) |
repository.mail.fl_str_mv |
repositorio.arca@fiocruz.br |
_version_ |
1813009063273824256 |