Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.

Detalhes bibliográficos
Autor(a) principal: Koskey, Amber M
Data de Publicação: 2014
Outros Autores: Fisher, Jenny C, Eren, A. Murat, Terashima, Rafael Ponce, Reis, Mitermayer Galvão dos, Blanton, Ronald Edward, McLellan, Sandra L
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/10376
Resumo: University of Wisconsin. School of Freshwater Sciences. Milwaukee, Milwaukee, USA
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spelling Koskey, Amber MFisher, Jenny CEren, A. MuratTerashima, Rafael PonceReis, Mitermayer Galvão dosBlanton, Ronald EdwardMcLellan, Sandra L2015-05-15T18:36:55Z2015-05-15T18:36:55Z2014KOSKEY, A. M. et al. Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.Environmental Microbiology Reports, v. 6, n. 6, p. 696-704, 2014.1758-2229https://www.arca.fiocruz.br/handle/icict/1037610.1111/1758-2229.12189engWileyBacteroidesPrevotellaBlautiaHumanosPoluiçãoAnimaisFezesEsgotosBrazilBlautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleUniversity of Wisconsin. School of Freshwater Sciences. Milwaukee, Milwaukee, USAUniversity of Wisconsin. School of Freshwater Sciences. Milwaukee, Milwaukee, USAMarine Biological Laboratory. The Josephine Bay Paul Center. Woods Hole, USA.Case Western Reserve University. Center for Global Health and Diseases. Cleveland, USA.Fundação Oswaldo Cruz. Centro de Pesquisas Gonçalo Moniz. Laboratório de Patologia e Biologia Molecular. Salvador, BA, Brasil / Social Changes. Asthma and Allergy in Latin America. SCAALA. Salvador, BA, BrasilMarine Biological Laboratory. The Josephine Bay Paul Center. Woods Hole, USA.University of Wisconsin. School of Freshwater Sciences. Milwaukee, Milwaukee, USAUntreated sewage discharges and limited agricultural manure management practices contribute to fecal pollution in rural Brazilian waterways. Most microbial source tracking studies have focused on Bacteroidales, and few have tested host-specific indicators in underdeveloped regions. Sequencing of sewage and human and animal feces with Illumina HiSeq revealed Prevotellaceae as the most abundant family in humans, with Lachnospiraceae and Ruminococcaceae also comprising a large proportion of the microbiome. These same families were also dominant in animals. Bacteroides, the genus containing the most commonly utilized human-specific marker in the United States was present in very low abundance. We used oligotyping to identify Prevotella and Blautia sequences that can distinguish human fecal contamination. Thirty-five of 61 Blautia oligotypes and 13 of 108 Prevotella oligotypes in humans were host-specific or highly abundant (i.e. host-preferred) compared to pig, dog, horse and cow sources. Certain human Prevotella and Blautia oligotypes increased more than an order of magnitude along a polluted river transect in rural Brazil, but traditional fecal indicator levels followed a steady or even decreasing trend. While both Prevotella and Blautia oligotypes distinguished human and animal fecal pollution in Brazil surface waters, Blautia appears to contain more discriminatory and globally applicable markers for tracking sources of fecal pollutioninfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82352https://www.arca.fiocruz.br/bitstream/icict/10376/1/license.txtafbdf7d7a9bcf771a1cc7edf5f618413MD51ORIGINALKoskey AM Blautia....pdfKoskey AM Blautia....pdfapplication/pdf540078https://www.arca.fiocruz.br/bitstream/icict/10376/2/Koskey%20AM%20Blautia....pdfdfdb5e8858900e9fbdc2a04b5e63214fMD52TEXTKoskey AM Blautia....pdf.txtKoskey AM Blautia....pdf.txtExtracted texttext/plain42642https://www.arca.fiocruz.br/bitstream/icict/10376/3/Koskey%20AM%20Blautia....pdf.txtc99323cec5cf404bc3a8c1eb2c5c5530MD53icict/103762023-03-15 14:33:09.173oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352023-03-15T17:33:09Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)false
dc.title.pt_BR.fl_str_mv Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
title Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
spellingShingle Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
Koskey, Amber M
Bacteroides
Prevotella
Blautia
Humanos
Poluição
Animais
Fezes
Esgotos
Brazil
title_short Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
title_full Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
title_fullStr Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
title_full_unstemmed Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
title_sort Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.
author Koskey, Amber M
author_facet Koskey, Amber M
Fisher, Jenny C
Eren, A. Murat
Terashima, Rafael Ponce
Reis, Mitermayer Galvão dos
Blanton, Ronald Edward
McLellan, Sandra L
author_role author
author2 Fisher, Jenny C
Eren, A. Murat
Terashima, Rafael Ponce
Reis, Mitermayer Galvão dos
Blanton, Ronald Edward
McLellan, Sandra L
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Koskey, Amber M
Fisher, Jenny C
Eren, A. Murat
Terashima, Rafael Ponce
Reis, Mitermayer Galvão dos
Blanton, Ronald Edward
McLellan, Sandra L
dc.subject.other.pt_BR.fl_str_mv Bacteroides
Prevotella
Blautia
Humanos
Poluição
Animais
Fezes
Esgotos
Brazil
topic Bacteroides
Prevotella
Blautia
Humanos
Poluição
Animais
Fezes
Esgotos
Brazil
description University of Wisconsin. School of Freshwater Sciences. Milwaukee, Milwaukee, USA
publishDate 2014
dc.date.issued.fl_str_mv 2014
dc.date.accessioned.fl_str_mv 2015-05-15T18:36:55Z
dc.date.available.fl_str_mv 2015-05-15T18:36:55Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
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status_str publishedVersion
dc.identifier.citation.fl_str_mv KOSKEY, A. M. et al. Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.Environmental Microbiology Reports, v. 6, n. 6, p. 696-704, 2014.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/10376
dc.identifier.issn.none.fl_str_mv 1758-2229
dc.identifier.doi.none.fl_str_mv 10.1111/1758-2229.12189
identifier_str_mv KOSKEY, A. M. et al. Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.Environmental Microbiology Reports, v. 6, n. 6, p. 696-704, 2014.
1758-2229
10.1111/1758-2229.12189
url https://www.arca.fiocruz.br/handle/icict/10376
dc.language.iso.fl_str_mv eng
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dc.publisher.none.fl_str_mv Wiley
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