Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank

Detalhes bibliográficos
Autor(a) principal: Amaral, Gilda Rose S.
Data de Publicação: 2012
Outros Autores: Silva, Bruno Sergio de O., Santos, Eidy O., Dias, Graciela M., Lopes, Rubens M., Edwards, Robert A., Thompson, Cristiane C., Thompson, Fabiano L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da FIOCRUZ (ARCA)
Texto Completo: https://www.arca.fiocruz.br/handle/icict/30329
Resumo: Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.
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spelling Amaral, Gilda Rose S.Silva, Bruno Sergio de O.Santos, Eidy O.Dias, Graciela M.Lopes, Rubens M.Edwards, Robert A.Thompson, Cristiane C.Thompson, Fabiano L.2018-11-29T15:40:52Z2018-11-29T15:40:52Z2012AMARAL, Gilda Rose S. et al. Genome Sequence of the Bacterioplanktonic, Mixotrophic Vibrio campbellii Strain PEL22A, Isolated in the Abrolhos Bank. Journal of Bacteriology, p.2759-2760, 2012.0021-9193https://www.arca.fiocruz.br/handle/icict/3032910.1128/JB.00377-121098-5530engAmerican Society for MicrobiologyVibrio campbellii PEL22ABacterioplanctônicoSequência de genomaBanco dos AbrolhosVibrio campbellii Strain PEL22ABacterioplanktonicGenome SequenceAbrolhos BankGenome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bankinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleUniversidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.Universidade de São Paulo. Instituto Oceanográfico. São Paulo, SP, Brasil.Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil / San Diego State University. Department of Computer Science and Computational Science Research Center. San Diego, CA, USA.Fundação Oswaldo Cruz. Instituto Oswaldo Cruz. Laboratório de Genética Molecular de Microrganismos. Rio de Janeiro, RJ. Brasil.Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.Vibrio campbellii PEL22A was isolated from open ocean water in the Abrolhos Bank. The genome of PEL22A consists of 6,788,038 bp (the GC content is 45%). The number of coding sequences (CDS) is 6,359, as determined according to the Rapid Annotation using Subsystem Technology (RAST) server. The number of ribosomal genes is 80, of which 68 are tRNAs and 12 are rRNAs. V. campbellii PEL22A contains genes related to virulence and fitness, including a complete proteorhodopsin cluster, complete type II and III secretion systems, incomplete type I, IV, and VI secretion systems, a hemolysin, and CTXΦ.info:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/30329/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALcristiance_thompson_etal_IOC_2012.pdfcristiance_thompson_etal_IOC_2012.pdfapplication/pdf95819https://www.arca.fiocruz.br/bitstream/icict/30329/2/cristiance_thompson_etal_IOC_2012.pdfa2edeb7b5325f40311d99cf69856a80eMD52TEXTcristiance_thompson_etal_IOC_2012.pdf.txtcristiance_thompson_etal_IOC_2012.pdf.txtExtracted 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dc.title.pt_BR.fl_str_mv Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
title Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
spellingShingle Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
Amaral, Gilda Rose S.
Vibrio campbellii PEL22A
Bacterioplanctônico
Sequência de genoma
Banco dos Abrolhos
Vibrio campbellii Strain PEL22A
Bacterioplanktonic
Genome Sequence
Abrolhos Bank
title_short Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
title_full Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
title_fullStr Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
title_full_unstemmed Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
title_sort Genome sequence of the bacterioplanktonic, mixotrophic Vibrio campbellii strain PEL22A, isolated in the Abrolhos Bank
author Amaral, Gilda Rose S.
author_facet Amaral, Gilda Rose S.
Silva, Bruno Sergio de O.
Santos, Eidy O.
Dias, Graciela M.
Lopes, Rubens M.
Edwards, Robert A.
Thompson, Cristiane C.
Thompson, Fabiano L.
author_role author
author2 Silva, Bruno Sergio de O.
Santos, Eidy O.
Dias, Graciela M.
Lopes, Rubens M.
Edwards, Robert A.
Thompson, Cristiane C.
Thompson, Fabiano L.
author2_role author
author
author
author
author
author
author
dc.contributor.author.fl_str_mv Amaral, Gilda Rose S.
Silva, Bruno Sergio de O.
Santos, Eidy O.
Dias, Graciela M.
Lopes, Rubens M.
Edwards, Robert A.
Thompson, Cristiane C.
Thompson, Fabiano L.
dc.subject.other.pt_BR.fl_str_mv Vibrio campbellii PEL22A
Bacterioplanctônico
Sequência de genoma
Banco dos Abrolhos
topic Vibrio campbellii PEL22A
Bacterioplanctônico
Sequência de genoma
Banco dos Abrolhos
Vibrio campbellii Strain PEL22A
Bacterioplanktonic
Genome Sequence
Abrolhos Bank
dc.subject.en.pt_BR.fl_str_mv Vibrio campbellii Strain PEL22A
Bacterioplanktonic
Genome Sequence
Abrolhos Bank
description Universidade Federal do Rio de Janeiro. Instituto de Biologia. Departamento de Biologia Marinha. Rio de Janeiro, RJ, Brasil.
publishDate 2012
dc.date.issued.fl_str_mv 2012
dc.date.accessioned.fl_str_mv 2018-11-29T15:40:52Z
dc.date.available.fl_str_mv 2018-11-29T15:40:52Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.citation.fl_str_mv AMARAL, Gilda Rose S. et al. Genome Sequence of the Bacterioplanktonic, Mixotrophic Vibrio campbellii Strain PEL22A, Isolated in the Abrolhos Bank. Journal of Bacteriology, p.2759-2760, 2012.
dc.identifier.uri.fl_str_mv https://www.arca.fiocruz.br/handle/icict/30329
dc.identifier.issn.pt_BR.fl_str_mv 0021-9193
dc.identifier.doi.none.fl_str_mv 10.1128/JB.00377-12
dc.identifier.eissn.none.fl_str_mv 1098-5530
identifier_str_mv AMARAL, Gilda Rose S. et al. Genome Sequence of the Bacterioplanktonic, Mixotrophic Vibrio campbellii Strain PEL22A, Isolated in the Abrolhos Bank. Journal of Bacteriology, p.2759-2760, 2012.
0021-9193
10.1128/JB.00377-12
1098-5530
url https://www.arca.fiocruz.br/handle/icict/30329
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.publisher.none.fl_str_mv American Society for Microbiology
publisher.none.fl_str_mv American Society for Microbiology
dc.source.none.fl_str_mv reponame:Repositório Institucional da FIOCRUZ (ARCA)
instname:Fundação Oswaldo Cruz (FIOCRUZ)
instacron:FIOCRUZ
instname_str Fundação Oswaldo Cruz (FIOCRUZ)
instacron_str FIOCRUZ
institution FIOCRUZ
reponame_str Repositório Institucional da FIOCRUZ (ARCA)
collection Repositório Institucional da FIOCRUZ (ARCA)
bitstream.url.fl_str_mv https://www.arca.fiocruz.br/bitstream/icict/30329/1/license.txt
https://www.arca.fiocruz.br/bitstream/icict/30329/2/cristiance_thompson_etal_IOC_2012.pdf
https://www.arca.fiocruz.br/bitstream/icict/30329/3/cristiance_thompson_etal_IOC_2012.pdf.txt
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