Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil.
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2013 |
| Outros Autores: | , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
| Texto Completo: | https://www.arca.fiocruz.br/handle/icict/7484 |
Resumo: | Yale University. Department of Ecology and Evolutionary Biology. New Haven, USA |
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Kajdacsi, BrittneyCosta, FedericoHyseni, ChazPorter, Fleur HelenaBrown, JuliaRodrigues, GoreteFarias, HelenaReis, Mitermayer Galvão dosChilds, James EKo, Albert IcksangCaccone, Adalgisa2014-04-02T16:32:28Z2014-04-02T16:32:28Z2013KAJDACSI B. et al. Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. Molecular Ecology, v. 22, n. 20, p. 5056–5070, 2013.1365-294Xhttps://www.arca.fiocruz.br/handle/icict/748410.1111/mec.12455engBlackwell Scientific PublicationsUrban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil.info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleYale University. Department of Ecology and Evolutionary Biology. New Haven, USAYale School of Public Health. Department of Epidemiology of Microbial Diseases. New Haven, USA / Fundação Oswaldo Cruz. Centro de Pesquisa Gonçalo Moniz. Salvador, BA, BrasilYale University. Department of Ecology and Evolutionary Biology. New Haven, USAYale University. Department of Ecology and Evolutionary Biology. New Haven, USAYale University. Department of Ecology and Evolutionary Biology. New Haven, USAMinistério da Saúde. Secretaria Municipal de Sa ude. Centro de Controle de Zoonoses. Salvador, BA, BrasilMinistério da Saúde. Secretaria Municipal de Sa ude. Centro de Controle de Zoonoses. Salvador, BA, BrasilFundação Oswaldo Cruz. Centro de Pesquisa Gonçalo Moniz. Salvador, BA, BrasilYale School of Public Health. Department of Epidemiology of Microbial Diseases. New Haven, USAYale School of Public Health. Department of Epidemiology of Microbial Diseases. New Haven, USA / Fundação Oswaldo Cruz. Centro de Pesquisa Gonçalo Moniz. Salvador, BA, BrasilYale University. Department of Ecology and Evolutionary Biology. New Haven, USAThroughout the developing world, urban centres with sprawling slum settlements are rapidly expanding and invading previously forested ecosystems. Slum communities are characterized by untended refuse, open sewers and overgrown vegetation, which promote rodent infestation. Norway rats (Rattus norvegicus) are reservoirs for epidemic transmission of many zoonotic pathogens of public health importance. Understanding the population ecology of R. norvegicus is essential to formulate effective rodent control strategies, as this knowledge aids estimation of the temporal stability and spatial connectivity of populations. We screened for genetic variation, characterized the population genetic structure and evaluated the extent and patterns of gene flow in the urban landscape using 17 microsatellite loci in 146 rats from nine sites in the city of Salvador, Brazil. These sites were divided between three neighbourhoods within the city spaced an average of 2.7 km apart. Surprisingly, we detected very little relatedness among animals trapped at the same site and found high levels of genetic diversity, as well as structuring across small geographical distances. Most F(ST) comparisons among sites were statistically significant, including sites <400 m apart. Bayesian analyses grouped the samples in three genetic clusters, each associated with distinct sampling sites from different neighbourhoods or valleys within neighbourhoods. These data indicate the existence of complex genetic structure in R. norvegicus in Salvador, linked to the heterogeneous urban landscape. Future rodent control measures need to take into account the spatial and temporal linkage of rat populations in Salvador, as revealed by genetic data, to develop informed eradication strategies.Population geneticsRattus norvegicusRodent controlUrban ecologyVariação GenéticaGenética Populacional/métodosÁreas de PobrezaRatos/genéticaAnimaisTeorema de BayesBrasilVetores de DoençasFluxo GênicoRepetições de MicrossatélitesControle de PragasDensidade Demográficainfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZORIGINALKajdacsi B Urban populations....pdfKajdacsi B Urban populations....pdfapplication/pdf1432928https://www.arca.fiocruz.br/bitstream/icict/7484/1/Kajdacsi%20B%20Urban%20populations....pdfb34aeecd4a7395c077d23f96456eaf50MD51LICENSElicense.txtlicense.txttext/plain; charset=utf-81914https://www.arca.fiocruz.br/bitstream/icict/7484/2/license.txt7d48279ffeed55da8dfe2f8e81f3b81fMD52TEXTKajdacsi B Urban populations....pdf.txtKajdacsi B Urban populations....pdf.txtExtracted texttext/plain71814https://www.arca.fiocruz.br/bitstream/icict/7484/5/Kajdacsi%20B%20Urban%20populations....pdf.txt0770410e60754c16977b66b457e2f246MD55THUMBNAILKajdacsi B Urban populations....pdf.jpgKajdacsi B Urban populations....pdf.jpgGenerated Thumbnailimage/jpeg2256https://www.arca.fiocruz.br/bitstream/icict/7484/4/Kajdacsi%20B%20Urban%20populations....pdf.jpgb222125c1f9bf7f941a5b4eed7e4308cMD54icict/74842023-03-15 14:33:12.92oai:www.arca.fiocruz.br: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ório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352023-03-15T17:33:12Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)false |
| dc.title.pt_BR.fl_str_mv |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| title |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| spellingShingle |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. Kajdacsi, Brittney Population genetics Rattus norvegicus Rodent control Urban ecology Variação Genética Genética Populacional/métodos Áreas de Pobreza Ratos/genética Animais Teorema de Bayes Brasil Vetores de Doenças Fluxo Gênico Repetições de Microssatélites Controle de Pragas Densidade Demográfica |
| title_short |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| title_full |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| title_fullStr |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| title_full_unstemmed |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| title_sort |
Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. |
| author |
Kajdacsi, Brittney |
| author_facet |
Kajdacsi, Brittney Costa, Federico Hyseni, Chaz Porter, Fleur Helena Brown, Julia Rodrigues, Gorete Farias, Helena Reis, Mitermayer Galvão dos Childs, James E Ko, Albert Icksang Caccone, Adalgisa |
| author_role |
author |
| author2 |
Costa, Federico Hyseni, Chaz Porter, Fleur Helena Brown, Julia Rodrigues, Gorete Farias, Helena Reis, Mitermayer Galvão dos Childs, James E Ko, Albert Icksang Caccone, Adalgisa |
| author2_role |
author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Kajdacsi, Brittney Costa, Federico Hyseni, Chaz Porter, Fleur Helena Brown, Julia Rodrigues, Gorete Farias, Helena Reis, Mitermayer Galvão dos Childs, James E Ko, Albert Icksang Caccone, Adalgisa |
| dc.subject.en.pt_BR.fl_str_mv |
Population genetics Rattus norvegicus Rodent control Urban ecology |
| topic |
Population genetics Rattus norvegicus Rodent control Urban ecology Variação Genética Genética Populacional/métodos Áreas de Pobreza Ratos/genética Animais Teorema de Bayes Brasil Vetores de Doenças Fluxo Gênico Repetições de Microssatélites Controle de Pragas Densidade Demográfica |
| dc.subject.decs.pt_BR.fl_str_mv |
Variação Genética Genética Populacional/métodos Áreas de Pobreza Ratos/genética Animais Teorema de Bayes Brasil Vetores de Doenças Fluxo Gênico Repetições de Microssatélites Controle de Pragas Densidade Demográfica |
| description |
Yale University. Department of Ecology and Evolutionary Biology. New Haven, USA |
| publishDate |
2013 |
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2013 |
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2014-04-02T16:32:28Z |
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2014-04-02T16:32:28Z |
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info:eu-repo/semantics/publishedVersion |
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info:eu-repo/semantics/article |
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article |
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publishedVersion |
| dc.identifier.citation.fl_str_mv |
KAJDACSI B. et al. Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. Molecular Ecology, v. 22, n. 20, p. 5056–5070, 2013. |
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https://www.arca.fiocruz.br/handle/icict/7484 |
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1365-294X |
| dc.identifier.doi.none.fl_str_mv |
10.1111/mec.12455 |
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KAJDACSI B. et al. Urban population genetics of slum-dwelling rats (Rattus norvegicus) in Salvador, Brazil. Molecular Ecology, v. 22, n. 20, p. 5056–5070, 2013. 1365-294X 10.1111/mec.12455 |
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Blackwell Scientific Publications |
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Blackwell Scientific Publications |
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