Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012
Autor(a) principal: | |
---|---|
Data de Publicação: | 2014 |
Tipo de documento: | Dissertação |
Idioma: | por |
Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
Texto Completo: | https://www.arca.fiocruz.br/handle/icict/37498 |
Resumo: | INTRODUCTION / RATIONALE: The rickettsial diseases are present in areas with favorable conditions such as socioeconomic and epidemiological characteristics. It is necessary to address the determinants of presentation in our country, where information is scarce. This study aims to describe some related epidemiological aspects and attempts to characterize for the first time in Peru the circulating species of rickettsiae isolated from patients and also from vectors present in four departments: Tacna, Tumbes, Loreto and Madre de Dios, which were collected during previous population-based study to detect its prevalence. OBJECTIVES: Describe some characteristic, clinical-epidemiological and genomic aspects of the circulation of rickettsias during the years 2011 and 2012 in 4 border areas of Peru. METHODS: We analyzed clinical and epidemiological data from 1,657 individuals of various age groups. The information was obtained from records stored in a previous study and past and present studies received approval by the Ethics Committee of the INS and used the same informed consent. In addition, reactivated and propagated isolates from humans and also vectors macerated, obtained during the previous study were used to perform DNA extraction and PCR tests for the htrA and gltA gene in order to proceed the genomic sequencing and identify the isolates. RESULTS: On average for the four regions, 81.35 % of individuals reported contact with potential arthropod vectors, and 56.5 % of them with domestic and peri household animals. The parameters age, sex and others were similar when comparing individuals of the 4 departments; the prevalence of regular (62%) to low (27%), housing and sanitation conditions were evidenced. 22.6 % of the cases with positive microorganism isolation were asymptomatic individuals, 45 % of them nonfebrile, thus not being good source for molecular study since they usually have a poor microbial load. As consequence, when human isolates were studied, in the first instance, only faint bands were evident in the PCR. Only after 9 to10 passages performed to spread the microbial load we could increase and continue the molecular methods for the human samples. In the order hand, we were able to perform a molecular sequencing of the vector analyzed. Sequence homology was found for Rickettsia felis isolated from Ctenocephalides canis and Rhipicephalus sanguinus; this result agrees with previous studies. In addition, we were also able to identify two species of rickettsias, i.e Rickettsia sp y Rickettsia endosymbionte, this latter not yet reported in Peru; which warrants us to continue the studies to verify these findings. CONCLUSIONS AND PERSPECTIVES: This is the first study in Peru which attempts to characterize circulating rickettsial species from human isolates from different regions of our country. It should be noted that standardization, development and implementation of specialized biological and molecular techniques, during this study is a contribution to strengthen the institutional and national capacity to achieve an effective surveillance of rickettsial diseases in Peruvian territory. Based on procedures highly effective, sensitive, specific and broad accessibility lab, which would not be possible if we do not have the necessary information about the biological, molecular and epidemiological characteristics of infectious agent involved. |
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Palacios Salvatierra, RosaSilva, Fátima da Conceição2019-11-29T12:45:10Z2019-11-29T12:45:10Z2014PALACIOS SALVATIERRA, Rosa. Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012. 2014. 86 f. Dissertação (Mestrado em Saúde Pública) - Escola Nacional de Saúde Pública Sergio Arouca, Fundação Oswaldo Cruz, Rio de Janeiro, 2014.https://www.arca.fiocruz.br/handle/icict/37498porAspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012Epidemiological and molecular aspects of rickettsiosis in Peruvian border areas - years 2011- 2012info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/masterThesis2014Escola Nacional de Saúde Pública Sergio Arouca. Fundação Oswaldo CruzFundação Oswaldo Cruz. Escola Nacional de Saúde Pública Sergio AroucaRio de Janeiro/RJPrograma de Pós-Graduação em Saúde PúblicaINTRODUCTION / RATIONALE: The rickettsial diseases are present in areas with favorable conditions such as socioeconomic and epidemiological characteristics. It is necessary to address the determinants of presentation in our country, where information is scarce. This study aims to describe some related epidemiological aspects and attempts to characterize for the first time in Peru the circulating species of rickettsiae isolated from patients and also from vectors present in four departments: Tacna, Tumbes, Loreto and Madre de Dios, which were collected during previous population-based study to detect its prevalence. OBJECTIVES: Describe some characteristic, clinical-epidemiological and genomic aspects of the circulation of rickettsias during the years 2011 and 2012 in 4 border areas of Peru. METHODS: We analyzed clinical and epidemiological data from 1,657 individuals of various age groups. The information was obtained from records stored in a previous study and past and present studies received approval by the Ethics Committee of the INS and used the same informed consent. In addition, reactivated and propagated isolates from humans and also vectors macerated, obtained during the previous study were used to perform DNA extraction and PCR tests for the htrA and gltA gene in order to proceed the genomic sequencing and identify the isolates. RESULTS: On average for the four regions, 81.35 % of individuals reported contact with potential arthropod vectors, and 56.5 % of them with domestic and peri household animals. The parameters age, sex and others were similar when comparing individuals of the 4 departments; the prevalence of regular (62%) to low (27%), housing and sanitation conditions were evidenced. 22.6 % of the cases with positive microorganism isolation were asymptomatic individuals, 45 % of them nonfebrile, thus not being good source for molecular study since they usually have a poor microbial load. As consequence, when human isolates were studied, in the first instance, only faint bands were evident in the PCR. Only after 9 to10 passages performed to spread the microbial load we could increase and continue the molecular methods for the human samples. In the order hand, we were able to perform a molecular sequencing of the vector analyzed. Sequence homology was found for Rickettsia felis isolated from Ctenocephalides canis and Rhipicephalus sanguinus; this result agrees with previous studies. In addition, we were also able to identify two species of rickettsias, i.e Rickettsia sp y Rickettsia endosymbionte, this latter not yet reported in Peru; which warrants us to continue the studies to verify these findings. CONCLUSIONS AND PERSPECTIVES: This is the first study in Peru which attempts to characterize circulating rickettsial species from human isolates from different regions of our country. It should be noted that standardization, development and implementation of specialized biological and molecular techniques, during this study is a contribution to strengthen the institutional and national capacity to achieve an effective surveillance of rickettsial diseases in Peruvian territory. Based on procedures highly effective, sensitive, specific and broad accessibility lab, which would not be possible if we do not have the necessary information about the biological, molecular and epidemiological characteristics of infectious agent involved.Fundação Oswaldo Cruz. Escola Nacional de Saúde Pública Sergio Arouca. Rio de Janeiro, RJ, Brasil.INTRODUCCION/JUSTIFICACION: Las rickettsiosis son enfermedades de zonas endémicas que tienen como condicionantes, factores socioeconómicos además de epidemiológicos. Resulta necesario abordar los aspectos determinantes de su presentación en nuestro país, en donde la información es escasa. El presente estudio describe algunos aspectos epidemiológicos relacionados e incursiona por primera vez en el Perú en intentos de caracterización de especies circulantes de rickettsias a partir de aislamientos de humanos y también de vectores procedentes de localidades fronterizas de los departamentos de Tacna, Tumbes, Loreto y Madre de Dios, colectados durante un estudio poblacional previo para detectar prevalencia. OBJETIVOS: Describir algunos aspectos característicos, clínico-epidemiológicos y genómicos de la circulación de rickettsias durante los años 2011 y 2012 en localidades de 4 zonas de frontera del territorio peruano. METODOS: Se analizaron datos clínicos y epidemiológicos de individuos de diversos grupos etarios, información almacenada en 1,657 fichas del estudio previo, el cual contó con aprobación por Comité de Ética del Instituto Nacional de Salud (CEI-INS) y utilizó consentimiento informado. Se reactivaron y propagaron aislamientos obtenidos de humanos durante el estudio previo, requiriéndose múltiples pasajes para obtener una carga microbiana aceptable. También fueron usados macerados de vectores (pulgas y garrapatas), obtenidos al momento del estudio, a partir de perros y gatos, en las mismas localidades estudiadas. Se hizo extracción de ADN de los aislamientos y alternativamente de macerados de vectores, se corrieron pruebas PCR para los genes htrA y gltA. Luego se procedió a purificar los genomas para someterlos a secuenciamiento. Para la parte epidemiológica se evaluó proporciones. RESULTADOS: En promedio para las cuatro regiones, 81.35 % de encuestados informó haber tenido contacto con artrópodos vectores potenciales y el 56.5 % con animales domésticos y peri domiciliarios. Los parámetros edad, sexo fueron semejantes al comparar individuos de los 4 departamentos; se evidenció predominio de regulares (62 %) a bajas (27 %) condiciones de vivienda y saneamiento. El 22.6 % de los individuos con aislamiento positivo, eran asintomáticos, el 45 % no febriles, resultando este hecho, no propicio para el estudio molecular por constituir una pobre carga microbiana. Se evidenciaron, en primera instancia, bandas tenues en las corridas PCR. Solo después de 9 a 10 pasajes de propagación se elevó la carga microbiana y actualmente se continúa con los procedimientos moleculares para las muestras humanas. Se tuvo mayor éxito empleando vectores epidemiológicamente relacionados a los aislamientos en propagación, los cuales dieron bandas específicas consistentes por PCR, siendo sometidas a secuenciamiento, encontrándose homología para la especie Rickettsia felis en vectores Ctenocephalides canis y Riphicephalus sanguinus, lo cual concuerda con estudios previos realizados; además se encontró compatibilidad para dos especies, Rickettsia sp. y Rickettsia endosimbionte, esta última no reportada en Perú, lo cual amerita continuar con los estudios para verificar éstos hallazgos. CONCLUSIONES Y PERSPECTIVAS: Se incursiona por primera vez en el Perú en intentos de caracterización de especies circulantes de rickettsias a partir de aislamientos de humanos procedentes de localidades fronterizas. Cabe anotar que la estandarización, implementación, desarrollo y aplicación de técnicas biológicas y moleculares especializadas, con motivo de éste estudio es un aporte que fortalecerá la capacidad institucional y nacional para lograr un sistema de vigilancia eficaz de las rickettsiosis en territorio peruano, basada en procedimientos de laboratorio altamente eficaces, sensibles, específicos y de amplia accesibilidad, lo cual no sería posible si no se cuenta con la información necesaria acerca de las características biológicas, moleculares y epidemiológicas del agente infeccioso involucrado.RickettsiosisPeruepidemiologyMolecular CharacterizationRickettsiosisPerúEpidemiologiaCaracterización MolecularInfecções por RickettsiaceaeRickettsiaEstudos Epidemiológicosinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txttext/plain1748https://www.arca.fiocruz.br/bitstream/icict/37498/1/license.txt8a4605be74aa9ea9d79846c1fba20a33MD51ORIGINALve_Rosa_Palacios_ENSP_2014application/pdf657308https://www.arca.fiocruz.br/bitstream/icict/37498/2/ve_Rosa_Palacios_ENSP_20141dfb09b721fcfddc6b96e36f23b20fb9MD52TEXTve_Rosa_Palacios_ENSP_2014.txtve_Rosa_Palacios_ENSP_2014.txtExtracted texttext/plain110651https://www.arca.fiocruz.br/bitstream/icict/37498/3/ve_Rosa_Palacios_ENSP_2014.txtc6cc51523e727bd4be7038f1e164d8d9MD53icict/374982021-08-04 16:32:18.271oai:www.arca.fiocruz.br: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Repositório InstitucionalPUBhttps://www.arca.fiocruz.br/oai/requestrepositorio.arca@fiocruz.bropendoar:21352021-08-04T19:32:18Repositório Institucional da FIOCRUZ (ARCA) - Fundação Oswaldo Cruz (FIOCRUZ)false |
dc.title.pt_BR.fl_str_mv |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
dc.title.alternative.pt_BR.fl_str_mv |
Epidemiological and molecular aspects of rickettsiosis in Peruvian border areas - years 2011- 2012 |
title |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
spellingShingle |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 Palacios Salvatierra, Rosa Rickettsiosis Peru epidemiology Molecular Characterization Rickettsiosis Perú Epidemiologia Caracterización Molecular Infecções por Rickettsiaceae Rickettsia Estudos Epidemiológicos |
title_short |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
title_full |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
title_fullStr |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
title_full_unstemmed |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
title_sort |
Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012 |
author |
Palacios Salvatierra, Rosa |
author_facet |
Palacios Salvatierra, Rosa |
author_role |
author |
dc.contributor.author.fl_str_mv |
Palacios Salvatierra, Rosa |
dc.contributor.advisor1.fl_str_mv |
Silva, Fátima da Conceição |
contributor_str_mv |
Silva, Fátima da Conceição |
dc.subject.en.pt_BR.fl_str_mv |
Rickettsiosis Peru epidemiology Molecular Characterization |
topic |
Rickettsiosis Peru epidemiology Molecular Characterization Rickettsiosis Perú Epidemiologia Caracterización Molecular Infecções por Rickettsiaceae Rickettsia Estudos Epidemiológicos |
dc.subject.es.pt_BR.fl_str_mv |
Rickettsiosis Perú Epidemiologia Caracterización Molecular |
dc.subject.decs.pt_BR.fl_str_mv |
Infecções por Rickettsiaceae Rickettsia Estudos Epidemiológicos |
description |
INTRODUCTION / RATIONALE: The rickettsial diseases are present in areas with favorable conditions such as socioeconomic and epidemiological characteristics. It is necessary to address the determinants of presentation in our country, where information is scarce. This study aims to describe some related epidemiological aspects and attempts to characterize for the first time in Peru the circulating species of rickettsiae isolated from patients and also from vectors present in four departments: Tacna, Tumbes, Loreto and Madre de Dios, which were collected during previous population-based study to detect its prevalence. OBJECTIVES: Describe some characteristic, clinical-epidemiological and genomic aspects of the circulation of rickettsias during the years 2011 and 2012 in 4 border areas of Peru. METHODS: We analyzed clinical and epidemiological data from 1,657 individuals of various age groups. The information was obtained from records stored in a previous study and past and present studies received approval by the Ethics Committee of the INS and used the same informed consent. In addition, reactivated and propagated isolates from humans and also vectors macerated, obtained during the previous study were used to perform DNA extraction and PCR tests for the htrA and gltA gene in order to proceed the genomic sequencing and identify the isolates. RESULTS: On average for the four regions, 81.35 % of individuals reported contact with potential arthropod vectors, and 56.5 % of them with domestic and peri household animals. The parameters age, sex and others were similar when comparing individuals of the 4 departments; the prevalence of regular (62%) to low (27%), housing and sanitation conditions were evidenced. 22.6 % of the cases with positive microorganism isolation were asymptomatic individuals, 45 % of them nonfebrile, thus not being good source for molecular study since they usually have a poor microbial load. As consequence, when human isolates were studied, in the first instance, only faint bands were evident in the PCR. Only after 9 to10 passages performed to spread the microbial load we could increase and continue the molecular methods for the human samples. In the order hand, we were able to perform a molecular sequencing of the vector analyzed. Sequence homology was found for Rickettsia felis isolated from Ctenocephalides canis and Rhipicephalus sanguinus; this result agrees with previous studies. In addition, we were also able to identify two species of rickettsias, i.e Rickettsia sp y Rickettsia endosymbionte, this latter not yet reported in Peru; which warrants us to continue the studies to verify these findings. CONCLUSIONS AND PERSPECTIVES: This is the first study in Peru which attempts to characterize circulating rickettsial species from human isolates from different regions of our country. It should be noted that standardization, development and implementation of specialized biological and molecular techniques, during this study is a contribution to strengthen the institutional and national capacity to achieve an effective surveillance of rickettsial diseases in Peruvian territory. Based on procedures highly effective, sensitive, specific and broad accessibility lab, which would not be possible if we do not have the necessary information about the biological, molecular and epidemiological characteristics of infectious agent involved. |
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2014 |
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2019-11-29T12:45:10Z |
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PALACIOS SALVATIERRA, Rosa. Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012. 2014. 86 f. Dissertação (Mestrado em Saúde Pública) - Escola Nacional de Saúde Pública Sergio Arouca, Fundação Oswaldo Cruz, Rio de Janeiro, 2014. |
dc.identifier.uri.fl_str_mv |
https://www.arca.fiocruz.br/handle/icict/37498 |
identifier_str_mv |
PALACIOS SALVATIERRA, Rosa. Aspectos epidemiologicos y moleculares de las rickettsiosis en zonas de frontera peruana - años 2011- 2012. 2014. 86 f. Dissertação (Mestrado em Saúde Pública) - Escola Nacional de Saúde Pública Sergio Arouca, Fundação Oswaldo Cruz, Rio de Janeiro, 2014. |
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