The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth
| Autor(a) principal: | |
|---|---|
| Data de Publicação: | 2022 |
| Outros Autores: | , , , , , , , , , , , , , , , , , , , , |
| Tipo de documento: | Artigo |
| Idioma: | eng |
| Título da fonte: | Repositório Institucional da FIOCRUZ (ARCA) |
| Texto Completo: | https://www.arca.fiocruz.br/handle/icict/52119 |
Resumo: | National Academy de Ciências da Ucrânia. Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq). Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES). |
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Carvalho, Daniel Santana deUetanabaro, Ana Paula TrovattiKato, Rodrigo BentesAburjaile, Flávia FigueiraJaiswal, Arun KumarProfeta, RodrigoCarvalho, Rodrigo Dias de OliveiraTiwar, SandeepGomide, Anne Cybelle PintoCosta, Eduardo AlmeidaKukharenko, OlgaOrlovska, IrynaPodolich, OlgaReva, OlegRamos, Pablo Ivan P.Azevedo, Vasco Ariston de CarvalhoBrenig, BertramAndrade, Bruno SilvaVera, Jean-Pierre P. deKozyrovska, Natalia O.Barh, DebmalyaGóes Neto, Aristóteles2022-04-07T19:40:30Z2022-04-07T19:40:30Z2022CARVALHO, Daniel Santana de. The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth. Frontiers in Microbiology, v. 13, p. 1-17, 2022.1664-302Xhttps://www.arca.fiocruz.br/handle/icict/5211910.3389/fmicb.2022.782175National Academy de Ciências da Ucrânia. Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq). Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES).Universidade Federal de Minas Gerais. Instituto de Ciências Biológicas. Departamento de Microbiologia. Departamento de Genética. Ecologia e Evolução. Laboratório de Biologia Molecular e Computacional de Fungos. Belo Horizonte, MG, Brasil / Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Instituto de Ciências Biológicas. Departamento de Microbiologia. Departamento de Genética. Ecologia e Evolução. Laboratório de Biologia Molecular e Computacional de Fungos. Belo Horizonte, MG, Brasil / Universidade Estadual de Santa Cruz. Departamento de Ciências Biológicas. Programa de Pós-Graduação em Biologia e Biotecnologia de Microrganismos. Ilhéus, BA, Brasil.Universidade Federal de Minas Gerais. Instituto de Ciências Biológicas. Departamento de Microbiologia. Departamento de Genética. Ecologia e Evolução. Laboratório de Biologia Molecular e Computacional de Fungos. Belo Horizonte, MG, Brasil / Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.Universidade Estadual de Santa Cruz. Centro de Biologia Computacional e Gestão da Informação Biotecnológica. Ilhéus, BA, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Biológicas. Programa de Pós-Graduação em Biologia e Biotecnologia de Microrganismos. Ilhéus, BA, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Biológicas. Programa de Pós-Graduação em Biologia e Biotecnologia de Microrganismos. Ilhéus, BA, Brasil.Universidade Estadual de Santa Cruz. Departamento de Ciências Biológicas. Programa de Pós-Graduação em Biologia e Biotecnologia de Microrganismos. Ilhéus, BA, Brasil.University of Pretoria. Department of Biochemistry. Genetics and Microbiology. Centre for Bioinformatics and Computational Biology. Pretoria, South Africa.Fundação Oswaldo Cruz. Instituto Gonçalo Moniz. Centro de Integração de Dados e Conhecimento para a Saúde. Salvador, BA, Brasil.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil.University of Göttingen. Institute of Veterinary Medicine. Burckhardtweg, Göttingen, Germany.Universidade Estadual do Sudoeste da Bahia. Departamento de Ciências Biológicas. Laboratório de Bioinformática e Química Computacional. Jequié, BA, Brasil.German Aerospace Center (DLR) Berlin. Institute of Planetary Research. Planetary Laboratories. Astrobiological Laboratories. Berlin, Germany.Institute of Molecular Biology and Genetics of NASU. Kyiv, Ukraine.Universidade Federal de Minas Gerais. Departamento de Genética. Ecologia e Evolução. Laboratório de Genética Celular e Molecular. Belo Horizonte, MG, Brasil / Centre for Genomics and Applied Gene Technology. Institute of Integrative Omics and Applied Biotechnology. Purba Medinipur, India.Universidade Federal de Minas Gerais. Instituto de Ciências Biológicas. Departamento de Microbiologia. Departamento de Genética. Ecologia e Evolução. Laboratório de Biologia Molecular e Computacional de Fungos. Belo Horizonte, MG, Brasil.Komagataeibacter is the dominant taxon and cellulose-producing bacteria in the Kombucha Microbial ommunity (KMC). This is the first study to isolate the K. oboediens genome from a reactivated space-exposed KMC sample and comprehensively characterize it. The space-exposed genome was compared with the Earth-based reference genome to understand the genome stability of K. oboediens under extraterrestrial conditions during a long time. Our results suggest that the genomes of K. oboediens IMBG180 (ground sample) and K. oboediens IMBG185 (spaceexposed) are remarkably similar in topology, genomic islands, transposases, prion-like proteins, and number of plasmids and CRISPR-Cas cassettes. Nonetheless, there was a difference in the length of plasmids and the location of cas genes. A small difference was observed in the number of protein coding genes. Despite these differences, they do not affect any genetic metabolic profile of the cellulose synthesis, nitrogen-fixation, hopanoid lipids biosynthesis, and stress-related pathways. Minor changes are only observed in central carbohydrate and energy metabolism pathways gene numbers or sequence completeness. Altogether, these findings suggest that K. oboediens maintains its genome stability and functionality in KMC exposed to the space environment most probably due to the protective role of the KMC biofilm. Furthermore, due to its unaffected metabolic pathways, this bacterial species may also retain some promising potential for space applications.engFrontiers MediaGenômicaAcetobacteraceaeFixação de NitrogênioGenomicsAcetobacteraceaeNitrogen FixationGenómicaAcetobacteraceaeFijación del NitrógenoGénomiqueAcetobacteraceaeFixation de l'azoteThe space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earthinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleinfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da FIOCRUZ (ARCA)instname:Fundação Oswaldo Cruz (FIOCRUZ)instacron:FIOCRUZLICENSElicense.txtlicense.txttext/plain; charset=utf-82991https://www.arca.fiocruz.br/bitstream/icict/52119/1/license.txt5a560609d32a3863062d77ff32785d58MD51ORIGINALCarvalho, Daniel S. de - The Space-Exposed Kombucha Microbial.pdfCarvalho, Daniel S. de - The Space-Exposed Kombucha 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| dc.title.pt_BR.fl_str_mv |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| title |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| spellingShingle |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth Carvalho, Daniel Santana de Genômica Acetobacteraceae Fixação de Nitrogênio Genomics Acetobacteraceae Nitrogen Fixation Genómica Acetobacteraceae Fijación del Nitrógeno Génomique Acetobacteraceae Fixation de l'azote |
| title_short |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| title_full |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| title_fullStr |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| title_full_unstemmed |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| title_sort |
The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth |
| author |
Carvalho, Daniel Santana de |
| author_facet |
Carvalho, Daniel Santana de Uetanabaro, Ana Paula Trovatti Kato, Rodrigo Bentes Aburjaile, Flávia Figueira Jaiswal, Arun Kumar Profeta, Rodrigo Carvalho, Rodrigo Dias de Oliveira Tiwar, Sandeep Gomide, Anne Cybelle Pinto Costa, Eduardo Almeida Kukharenko, Olga Orlovska, Iryna Podolich, Olga Reva, Oleg Ramos, Pablo Ivan P. Azevedo, Vasco Ariston de Carvalho Brenig, Bertram Andrade, Bruno Silva Vera, Jean-Pierre P. de Kozyrovska, Natalia O. Barh, Debmalya Góes Neto, Aristóteles |
| author_role |
author |
| author2 |
Uetanabaro, Ana Paula Trovatti Kato, Rodrigo Bentes Aburjaile, Flávia Figueira Jaiswal, Arun Kumar Profeta, Rodrigo Carvalho, Rodrigo Dias de Oliveira Tiwar, Sandeep Gomide, Anne Cybelle Pinto Costa, Eduardo Almeida Kukharenko, Olga Orlovska, Iryna Podolich, Olga Reva, Oleg Ramos, Pablo Ivan P. Azevedo, Vasco Ariston de Carvalho Brenig, Bertram Andrade, Bruno Silva Vera, Jean-Pierre P. de Kozyrovska, Natalia O. Barh, Debmalya Góes Neto, Aristóteles |
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author author author author author author author author author author author author author author author author author author author author author |
| dc.contributor.author.fl_str_mv |
Carvalho, Daniel Santana de Uetanabaro, Ana Paula Trovatti Kato, Rodrigo Bentes Aburjaile, Flávia Figueira Jaiswal, Arun Kumar Profeta, Rodrigo Carvalho, Rodrigo Dias de Oliveira Tiwar, Sandeep Gomide, Anne Cybelle Pinto Costa, Eduardo Almeida Kukharenko, Olga Orlovska, Iryna Podolich, Olga Reva, Oleg Ramos, Pablo Ivan P. Azevedo, Vasco Ariston de Carvalho Brenig, Bertram Andrade, Bruno Silva Vera, Jean-Pierre P. de Kozyrovska, Natalia O. Barh, Debmalya Góes Neto, Aristóteles |
| dc.subject.other.pt_BR.fl_str_mv |
Genômica Acetobacteraceae Fixação de Nitrogênio |
| topic |
Genômica Acetobacteraceae Fixação de Nitrogênio Genomics Acetobacteraceae Nitrogen Fixation Genómica Acetobacteraceae Fijación del Nitrógeno Génomique Acetobacteraceae Fixation de l'azote |
| dc.subject.en.pt_BR.fl_str_mv |
Genomics Acetobacteraceae Nitrogen Fixation |
| dc.subject.es.pt_BR.fl_str_mv |
Genómica Acetobacteraceae Fijación del Nitrógeno |
| dc.subject.fr.pt_BR.fl_str_mv |
Génomique Acetobacteraceae Fixation de l'azote |
| description |
National Academy de Ciências da Ucrânia. Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq). Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES). |
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2022 |
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2022-04-07T19:40:30Z |
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2022-04-07T19:40:30Z |
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2022 |
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info:eu-repo/semantics/article |
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CARVALHO, Daniel Santana de. The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth. Frontiers in Microbiology, v. 13, p. 1-17, 2022. |
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https://www.arca.fiocruz.br/handle/icict/52119 |
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1664-302X |
| dc.identifier.doi.none.fl_str_mv |
10.3389/fmicb.2022.782175 |
| identifier_str_mv |
CARVALHO, Daniel Santana de. The space-exposed kombucha microbial community member Komagataeibacter oboediens showed only minor changes in its genome after reactivation on earth. Frontiers in Microbiology, v. 13, p. 1-17, 2022. 1664-302X 10.3389/fmicb.2022.782175 |
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