Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Pesquisa Veterinária Brasileira (Online) |
Texto Completo: | http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008 |
Resumo: | Bordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services. |
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Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)LAMPBordetella bronchisepticaflagellum genedetectionsensitivityBordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services.Colégio Brasileiro de Patologia Animal - CBPA2013-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008Pesquisa Veterinária Brasileira v.33 n.10 2013reponame:Pesquisa Veterinária Brasileira (Online)instname:Colégio Brasileiro de Patologia Animal (CBPA)instacron:EMBRAPA10.1590/S0100-736X2013001000008info:eu-repo/semantics/openAccessZhang,HuiZhu,LingZhou,YuanchengJi,HongweiDai,HongboGuo,WanzhuXu,Zhiweneng2013-12-20T00:00:00Zoai:scielo:S0100-736X2013001000008Revistahttp://www.pvb.com.br/https://old.scielo.br/oai/scielo-oai.phpcolegio@cbpa.org.br||pvb@pvb.com.br0100-736X1678-5150opendoar:2013-12-20T00:00Pesquisa Veterinária Brasileira (Online) - Colégio Brasileiro de Patologia Animal (CBPA)false |
dc.title.none.fl_str_mv |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
title |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
spellingShingle |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) Zhang,Hui LAMP Bordetella bronchiseptica flagellum gene detection sensitivity |
title_short |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
title_full |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
title_fullStr |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
title_full_unstemmed |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
title_sort |
Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP) |
author |
Zhang,Hui |
author_facet |
Zhang,Hui Zhu,Ling Zhou,Yuancheng Ji,Hongwei Dai,Hongbo Guo,Wanzhu Xu,Zhiwen |
author_role |
author |
author2 |
Zhu,Ling Zhou,Yuancheng Ji,Hongwei Dai,Hongbo Guo,Wanzhu Xu,Zhiwen |
author2_role |
author author author author author author |
dc.contributor.author.fl_str_mv |
Zhang,Hui Zhu,Ling Zhou,Yuancheng Ji,Hongwei Dai,Hongbo Guo,Wanzhu Xu,Zhiwen |
dc.subject.por.fl_str_mv |
LAMP Bordetella bronchiseptica flagellum gene detection sensitivity |
topic |
LAMP Bordetella bronchiseptica flagellum gene detection sensitivity |
description |
Bordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-10-01 |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008 |
url |
http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
10.1590/S0100-736X2013001000008 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
text/html |
dc.publisher.none.fl_str_mv |
Colégio Brasileiro de Patologia Animal - CBPA |
publisher.none.fl_str_mv |
Colégio Brasileiro de Patologia Animal - CBPA |
dc.source.none.fl_str_mv |
Pesquisa Veterinária Brasileira v.33 n.10 2013 reponame:Pesquisa Veterinária Brasileira (Online) instname:Colégio Brasileiro de Patologia Animal (CBPA) instacron:EMBRAPA |
instname_str |
Colégio Brasileiro de Patologia Animal (CBPA) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Veterinária Brasileira (Online) |
collection |
Pesquisa Veterinária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Veterinária Brasileira (Online) - Colégio Brasileiro de Patologia Animal (CBPA) |
repository.mail.fl_str_mv |
colegio@cbpa.org.br||pvb@pvb.com.br |
_version_ |
1754122233682329600 |