Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)

Detalhes bibliográficos
Autor(a) principal: Zhang,Hui
Data de Publicação: 2013
Outros Autores: Zhu,Ling, Zhou,Yuancheng, Ji,Hongwei, Dai,Hongbo, Guo,Wanzhu, Xu,Zhiwen
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Pesquisa Veterinária Brasileira (Online)
Texto Completo: http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008
Resumo: Bordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services.
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spelling Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)LAMPBordetella bronchisepticaflagellum genedetectionsensitivityBordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services.Colégio Brasileiro de Patologia Animal - CBPA2013-10-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersiontext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008Pesquisa Veterinária Brasileira v.33 n.10 2013reponame:Pesquisa Veterinária Brasileira (Online)instname:Colégio Brasileiro de Patologia Animal (CBPA)instacron:EMBRAPA10.1590/S0100-736X2013001000008info:eu-repo/semantics/openAccessZhang,HuiZhu,LingZhou,YuanchengJi,HongweiDai,HongboGuo,WanzhuXu,Zhiweneng2013-12-20T00:00:00Zoai:scielo:S0100-736X2013001000008Revistahttp://www.pvb.com.br/https://old.scielo.br/oai/scielo-oai.phpcolegio@cbpa.org.br||pvb@pvb.com.br0100-736X1678-5150opendoar:2013-12-20T00:00Pesquisa Veterinária Brasileira (Online) - Colégio Brasileiro de Patologia Animal (CBPA)false
dc.title.none.fl_str_mv Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
title Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
spellingShingle Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
Zhang,Hui
LAMP
Bordetella bronchiseptica
flagellum gene
detection
sensitivity
title_short Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
title_full Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
title_fullStr Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
title_full_unstemmed Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
title_sort Rapid and sensitive detection of Bordetella bronchiseptica by loop-mediated isothermal amplification (LAMP)
author Zhang,Hui
author_facet Zhang,Hui
Zhu,Ling
Zhou,Yuancheng
Ji,Hongwei
Dai,Hongbo
Guo,Wanzhu
Xu,Zhiwen
author_role author
author2 Zhu,Ling
Zhou,Yuancheng
Ji,Hongwei
Dai,Hongbo
Guo,Wanzhu
Xu,Zhiwen
author2_role author
author
author
author
author
author
dc.contributor.author.fl_str_mv Zhang,Hui
Zhu,Ling
Zhou,Yuancheng
Ji,Hongwei
Dai,Hongbo
Guo,Wanzhu
Xu,Zhiwen
dc.subject.por.fl_str_mv LAMP
Bordetella bronchiseptica
flagellum gene
detection
sensitivity
topic LAMP
Bordetella bronchiseptica
flagellum gene
detection
sensitivity
description Bordetella bronchiseptica causes acute and chronic respiratory infections in diverse animal species and occasionally in humans. In this study, we described the establishment of a simple, sensitive and cost-efficient loop-mediated isothermal amplification (LAMP) assay for the detection of B. bronchiseptica. A set of primers towards a 235 bp region within the flagellum gene of B. bronchiseptica was designed with online software.. The specificity of the LAMP assay was examined by using 6 porcine pathogens and 100 nasal swabs collected from healthy pigs and suspect infected pigs. The results indicated that positive reactions were confirmed for all B. bronchiseptica and no cross-reactivity was observed from other non-B. bronchiseptica. In sensitivity evaluations, the technique successfully detected a serial dilutions of extracted B. bronchiseptica DNA with a detection limit of 9 copies, which was 10 times more sensitive than that of PCR. Compared with conventional PCR, the higher sensitivity of LAMP method and no need for the complex instrumentation make this LAMP assay a promising alternative for the diagnosis of B. bronchiseptica in rural areas and developing countries where there lacks of complex laboratory services.
publishDate 2013
dc.date.none.fl_str_mv 2013-10-01
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2013001000008
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 10.1590/S0100-736X2013001000008
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv text/html
dc.publisher.none.fl_str_mv Colégio Brasileiro de Patologia Animal - CBPA
publisher.none.fl_str_mv Colégio Brasileiro de Patologia Animal - CBPA
dc.source.none.fl_str_mv Pesquisa Veterinária Brasileira v.33 n.10 2013
reponame:Pesquisa Veterinária Brasileira (Online)
instname:Colégio Brasileiro de Patologia Animal (CBPA)
instacron:EMBRAPA
instname_str Colégio Brasileiro de Patologia Animal (CBPA)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Veterinária Brasileira (Online)
collection Pesquisa Veterinária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Veterinária Brasileira (Online) - Colégio Brasileiro de Patologia Animal (CBPA)
repository.mail.fl_str_mv colegio@cbpa.org.br||pvb@pvb.com.br
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