Strategies for sampling and establishment of core collections
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/7595 |
Resumo: | The objective of this work was to evaluate the effect of sampling intensity, initial collection's size and its variance over the quality of the respective core collections, in terms of representation of the initial collections. Therefore, simulations were performed for seven sizes of the initial collections and six sampling intensities for the establishment of core collections were used, comprising morpho-agronomic traits. Groups formed were determined, as well as the coincidence coefficient between the core and the initial collection, and the determination coefficient of the accessions sampling to compose the core collection. The use of an alternative strategy was proposed to establish core collections, this strategy maximizes the diversity among the accessions. The size of initial collections affects the sampling intensity to be used to obtain a core collection. The selection of accessions with the method of Tocher, comprising criteria of inverse grouping, was efficient for the formation of the core collections. The different magnitudes of variance of the initial collections did not affect either the coefficient of determination (R2) or the coincidence rate between initial collections and respective core collection. |
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Strategies for sampling and establishment of core collectionsEstratégias de amostragem e estabelecimento de coleções nuclearesgermplasm collection; core collection; sampling intensity; coincidence rate; Tocher methodcoleção de germoplasma; coleção nuclear; intensidade de amostragem; coeficiente de coincidência; método de TocherThe objective of this work was to evaluate the effect of sampling intensity, initial collection's size and its variance over the quality of the respective core collections, in terms of representation of the initial collections. Therefore, simulations were performed for seven sizes of the initial collections and six sampling intensities for the establishment of core collections were used, comprising morpho-agronomic traits. Groups formed were determined, as well as the coincidence coefficient between the core and the initial collection, and the determination coefficient of the accessions sampling to compose the core collection. The use of an alternative strategy was proposed to establish core collections, this strategy maximizes the diversity among the accessions. The size of initial collections affects the sampling intensity to be used to obtain a core collection. The selection of accessions with the method of Tocher, comprising criteria of inverse grouping, was efficient for the formation of the core collections. The different magnitudes of variance of the initial collections did not affect either the coefficient of determination (R2) or the coincidence rate between initial collections and respective core collection.O objetivo deste trabalho foi avaliar a influência da intensidade de amostragem, do tamanho da coleção de germoplasma inicial e da variância da amostragem sobre a qualidade das respectivas coleções nucleares, quanto à representatividade das coleções iniciais. Foram simulados sete tamanhos de coleções iniciais e utilizadas seis intensidades de amostragem para estabelecimento de coleções nucleares, utilizando caracteres morfoagronômicos. Determinaram-se o número de grupos formados, o coeficiente de coincidência entre a coleção nuclear e a coleção inicial e o coeficiente de determinação dos acessos amostrados para comporem a coleção nuclear. Também foi proposto o uso de uma estratégia alternativa para estabelecer coleções nucleares, de forma a maximizar a diversidade entre os acessos. O tamanho da coleção inicial influencia a intensidade de amostragem empregada na obtenção da coleção nuclear. A amostragem de acessos pelo método de Tocher, com critério de aglomeração inverso, mostrou-se eficiente na obtenção de coleções nucleares. As diferentes magnitudes de variância das coleções iniciais não influenciaram os coeficientes de determinação (R2) nem os coeficientes de coincidência entre a coleção inicial e as respectivas coleções nucleares.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraVasconcelos, Edmar Soares deCruz, Cosme DamiãoBhering, Leonardo LopesFerreira, Adésio2007-04-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/7595Pesquisa Agropecuaria Brasileira; v.42, n.4, abr. 2007; 507-514Pesquisa Agropecuária Brasileira; v.42, n.4, abr. 2007; 507-5141678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/7595/4514info:eu-repo/semantics/openAccess2010-09-21T14:21:34Zoai:ojs.seer.sct.embrapa.br:article/7595Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2010-09-21T14:21:34Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Strategies for sampling and establishment of core collections Estratégias de amostragem e estabelecimento de coleções nucleares |
title |
Strategies for sampling and establishment of core collections |
spellingShingle |
Strategies for sampling and establishment of core collections Vasconcelos, Edmar Soares de germplasm collection; core collection; sampling intensity; coincidence rate; Tocher method coleção de germoplasma; coleção nuclear; intensidade de amostragem; coeficiente de coincidência; método de Tocher |
title_short |
Strategies for sampling and establishment of core collections |
title_full |
Strategies for sampling and establishment of core collections |
title_fullStr |
Strategies for sampling and establishment of core collections |
title_full_unstemmed |
Strategies for sampling and establishment of core collections |
title_sort |
Strategies for sampling and establishment of core collections |
author |
Vasconcelos, Edmar Soares de |
author_facet |
Vasconcelos, Edmar Soares de Cruz, Cosme Damião Bhering, Leonardo Lopes Ferreira, Adésio |
author_role |
author |
author2 |
Cruz, Cosme Damião Bhering, Leonardo Lopes Ferreira, Adésio |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
|
dc.contributor.author.fl_str_mv |
Vasconcelos, Edmar Soares de Cruz, Cosme Damião Bhering, Leonardo Lopes Ferreira, Adésio |
dc.subject.por.fl_str_mv |
germplasm collection; core collection; sampling intensity; coincidence rate; Tocher method coleção de germoplasma; coleção nuclear; intensidade de amostragem; coeficiente de coincidência; método de Tocher |
topic |
germplasm collection; core collection; sampling intensity; coincidence rate; Tocher method coleção de germoplasma; coleção nuclear; intensidade de amostragem; coeficiente de coincidência; método de Tocher |
description |
The objective of this work was to evaluate the effect of sampling intensity, initial collection's size and its variance over the quality of the respective core collections, in terms of representation of the initial collections. Therefore, simulations were performed for seven sizes of the initial collections and six sampling intensities for the establishment of core collections were used, comprising morpho-agronomic traits. Groups formed were determined, as well as the coincidence coefficient between the core and the initial collection, and the determination coefficient of the accessions sampling to compose the core collection. The use of an alternative strategy was proposed to establish core collections, this strategy maximizes the diversity among the accessions. The size of initial collections affects the sampling intensity to be used to obtain a core collection. The selection of accessions with the method of Tocher, comprising criteria of inverse grouping, was efficient for the formation of the core collections. The different magnitudes of variance of the initial collections did not affect either the coefficient of determination (R2) or the coincidence rate between initial collections and respective core collection. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-04-01 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/7595 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/7595 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/7595/4514 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.42, n.4, abr. 2007; 507-514 Pesquisa Agropecuária Brasileira; v.42, n.4, abr. 2007; 507-514 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416701066346496 |