Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers

Detalhes bibliográficos
Autor(a) principal: Viana dos Reis, Ronaldo
Data de Publicação: 2011
Outros Autores: de Oliveira, Eder Jorge, Viana, Alexandre Pio, Santana Pereira, Telma Nair, Pereira, Messias Gonzaga, de Morais Silva, Marcelo Geraldo
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/9551
Resumo: The objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced.
id EMBRAPA-4_445b3c06ac7eb845cda537489be8e69c
oai_identifier_str oai:ojs.seer.sct.embrapa.br:article/9551
network_acronym_str EMBRAPA-4
network_name_str Pesquisa Agropecuária Brasileira (Online)
repository_id_str
spelling Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markersDiversidade genética em seleção recorrente de maracujazeiro-amarelo detectada por marcadores microssatélitesPassiflora edulis; breeding; genetic variabilityPassiflora edulis; melhoramento; variabilidade genéticaThe objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced.O objetivo deste trabalho foi estimar a variabilidade genética em dois ciclos de seleção recorrente do maracujazeiro-amarelo (Passiflora edulis) e avaliar o impacto da seleção nas progênies selecionadas via alterações nas frequências alélicas, detectadas com uso de marcadores microssatélites. Vinte e três pares de iniciadores microssatélites foram utilizados na genotipagem de 66 progênies de irmãos completos. Estimaram-se a frequência alélica, heterozigosidade esperada (He) e observada (Ho), conteúdo de informação polimórfica (PIC) e coeficiente de endogamia (f). Foram encontrados 32 alelos nas populações, dos quais apenas dois foram perdidos durante a seleção. O número médio de alelos por locos foi de 2,46, no primeiro ciclo, e de 2,30 no segundo ciclo. As diferenças nas frequências alélicas nos dois ciclos de seleção recorrente não foram significativas. A He média no primeiro ciclo de seleção foi de 0,20 por loco, ligeiramente maior que a Ho (0,15). No segundo ciclo de seleção, o valor médio da Ho foi menor que o da He, com média de 0,12. Os valores médios de f aumentaram no segundo ciclo seletivo, de 0,26 para 0,32. A maioria dos locos apresentou valores negativos de f, o que sugere altos índices de heterozigosidade. O valor médio do PIC decresceu de 0,18 para 0,16 no segundo ciclo. Houve pequena perda de variabilidade e alterações nas frequências alélicas; porém, esta oscilação pode ser considerada normal quando se pratica seleçãoPesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraFapesb e CNPqViana dos Reis, Ronaldode Oliveira, Eder JorgeViana, Alexandre PioSantana Pereira, Telma NairPereira, Messias Gonzagade Morais Silva, Marcelo Geraldo2011-03-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/9551Pesquisa Agropecuaria Brasileira; v.46, n.1, jan. 2011; 51-57Pesquisa Agropecuária Brasileira; v.46, n.1, jan. 2011; 51-571678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/9551/6182https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/9551/4811info:eu-repo/semantics/openAccess2014-05-15T18:41:53Zoai:ojs.seer.sct.embrapa.br:article/9551Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-05-15T18:41:53Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
Diversidade genética em seleção recorrente de maracujazeiro-amarelo detectada por marcadores microssatélites
title Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
spellingShingle Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
Viana dos Reis, Ronaldo
Passiflora edulis; breeding; genetic variability
Passiflora edulis; melhoramento; variabilidade genética
title_short Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
title_full Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
title_fullStr Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
title_full_unstemmed Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
title_sort Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
author Viana dos Reis, Ronaldo
author_facet Viana dos Reis, Ronaldo
de Oliveira, Eder Jorge
Viana, Alexandre Pio
Santana Pereira, Telma Nair
Pereira, Messias Gonzaga
de Morais Silva, Marcelo Geraldo
author_role author
author2 de Oliveira, Eder Jorge
Viana, Alexandre Pio
Santana Pereira, Telma Nair
Pereira, Messias Gonzaga
de Morais Silva, Marcelo Geraldo
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv
Fapesb e CNPq
dc.contributor.author.fl_str_mv Viana dos Reis, Ronaldo
de Oliveira, Eder Jorge
Viana, Alexandre Pio
Santana Pereira, Telma Nair
Pereira, Messias Gonzaga
de Morais Silva, Marcelo Geraldo
dc.subject.por.fl_str_mv Passiflora edulis; breeding; genetic variability
Passiflora edulis; melhoramento; variabilidade genética
topic Passiflora edulis; breeding; genetic variability
Passiflora edulis; melhoramento; variabilidade genética
description The objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced.
publishDate 2011
dc.date.none.fl_str_mv 2011-03-23
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/9551
url https://seer.sct.embrapa.br/index.php/pab/article/view/9551
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/9551/6182
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/9551/4811
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.46, n.1, jan. 2011; 51-57
Pesquisa Agropecuária Brasileira; v.46, n.1, jan. 2011; 51-57
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
_version_ 1793416678419202048