Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/9551 |
Resumo: | The objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced. |
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Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markersDiversidade genética em seleção recorrente de maracujazeiro-amarelo detectada por marcadores microssatélitesPassiflora edulis; breeding; genetic variabilityPassiflora edulis; melhoramento; variabilidade genéticaThe objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced.O objetivo deste trabalho foi estimar a variabilidade genética em dois ciclos de seleção recorrente do maracujazeiro-amarelo (Passiflora edulis) e avaliar o impacto da seleção nas progênies selecionadas via alterações nas frequências alélicas, detectadas com uso de marcadores microssatélites. Vinte e três pares de iniciadores microssatélites foram utilizados na genotipagem de 66 progênies de irmãos completos. Estimaram-se a frequência alélica, heterozigosidade esperada (He) e observada (Ho), conteúdo de informação polimórfica (PIC) e coeficiente de endogamia (f). Foram encontrados 32 alelos nas populações, dos quais apenas dois foram perdidos durante a seleção. O número médio de alelos por locos foi de 2,46, no primeiro ciclo, e de 2,30 no segundo ciclo. As diferenças nas frequências alélicas nos dois ciclos de seleção recorrente não foram significativas. A He média no primeiro ciclo de seleção foi de 0,20 por loco, ligeiramente maior que a Ho (0,15). No segundo ciclo de seleção, o valor médio da Ho foi menor que o da He, com média de 0,12. Os valores médios de f aumentaram no segundo ciclo seletivo, de 0,26 para 0,32. A maioria dos locos apresentou valores negativos de f, o que sugere altos índices de heterozigosidade. O valor médio do PIC decresceu de 0,18 para 0,16 no segundo ciclo. Houve pequena perda de variabilidade e alterações nas frequências alélicas; porém, esta oscilação pode ser considerada normal quando se pratica seleçãoPesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraFapesb e CNPqViana dos Reis, Ronaldode Oliveira, Eder JorgeViana, Alexandre PioSantana Pereira, Telma NairPereira, Messias Gonzagade Morais Silva, Marcelo Geraldo2011-03-23info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/9551Pesquisa Agropecuaria Brasileira; v.46, n.1, jan. 2011; 51-57Pesquisa Agropecuária Brasileira; v.46, n.1, jan. 2011; 51-571678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/9551/6182https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/9551/4811info:eu-repo/semantics/openAccess2014-05-15T18:41:53Zoai:ojs.seer.sct.embrapa.br:article/9551Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-05-15T18:41:53Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers Diversidade genética em seleção recorrente de maracujazeiro-amarelo detectada por marcadores microssatélites |
title |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
spellingShingle |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers Viana dos Reis, Ronaldo Passiflora edulis; breeding; genetic variability Passiflora edulis; melhoramento; variabilidade genética |
title_short |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
title_full |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
title_fullStr |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
title_full_unstemmed |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
title_sort |
Genetic diversity in recurrent selection of yellow passion fruit detected by microsatellites markers |
author |
Viana dos Reis, Ronaldo |
author_facet |
Viana dos Reis, Ronaldo de Oliveira, Eder Jorge Viana, Alexandre Pio Santana Pereira, Telma Nair Pereira, Messias Gonzaga de Morais Silva, Marcelo Geraldo |
author_role |
author |
author2 |
de Oliveira, Eder Jorge Viana, Alexandre Pio Santana Pereira, Telma Nair Pereira, Messias Gonzaga de Morais Silva, Marcelo Geraldo |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Fapesb e CNPq |
dc.contributor.author.fl_str_mv |
Viana dos Reis, Ronaldo de Oliveira, Eder Jorge Viana, Alexandre Pio Santana Pereira, Telma Nair Pereira, Messias Gonzaga de Morais Silva, Marcelo Geraldo |
dc.subject.por.fl_str_mv |
Passiflora edulis; breeding; genetic variability Passiflora edulis; melhoramento; variabilidade genética |
topic |
Passiflora edulis; breeding; genetic variability Passiflora edulis; melhoramento; variabilidade genética |
description |
The objective of this work was to estimate the genetic variability in two recurrent selection cycles of the yellow passion flower (Passiflora edulis), and to evaluate the impact of selection on the progenies selected via changes in allele frequency, detected by microsatellite markers. Twenty-three microsatellites were used for genotyping 66 full-siblings. Allele frequency, expected (He) and observed (Ho) heterozygosity, polymorphic information content (PIC) and inbreeding coefficient (f) were estimated. Thirty-two alleles were found in these populations, of which only two were lost during selection. The average number of alleles per locus was 2.46 in the first cycle, and 2.30 in the second. The differences in allele frequencies in the two cycles were not significant. The mean He in the first cycle was 0.20 per locus, slightly higher than Ho (0.15). In the second selection cycle, the mean value of Ho was lower than of He, with an average of 0.12. The mean values of f increased in the second selection cycle, from 0.26 to 0.32. Most of the loci showed negative values of f, which suggests high levels of heterozygosity. The mean value of PIC decreased from 0.18 to 0.16 in the second cycle. There were small losses of variability and changes in allele frequencies; however, these variations can be considered normal when selection is practiced. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-03-23 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/9551 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/9551 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/9551/6182 https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/9551/4811 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.46, n.1, jan. 2011; 51-57 Pesquisa Agropecuária Brasileira; v.46, n.1, jan. 2011; 51-57 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416678419202048 |