Genetic characterization of the Moxotó goat breed using RAPD markers
Autor(a) principal: | |
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Data de Publicação: | 2005 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/6949 |
Resumo: | The objective of this study was to verify the genetic diversity between and within seven populations of Moxotó goat (n = 264) from the States of Pernambuco, Paraíba and Rio Grande do Norte, using RAPD (Random Amplified Polymorphic DNA). Moxotó, as well as other naturalized breeds, suffers genetic losses due to the indiscriminate miscegenation with breeds raised in the Northeast Region of Brazil. The genetic characterization of these genetic resources is essential to conservation and breeding programs. DNA was extracted from lymphocytes using a non-organic protocol. The 16 primers used were selected from 120 decamer oligonucleotide primers and generated 56 polymorphic bands. The analysis of molecular variance (AMOVA) showed that the greater part of total genetic variability (71.55%) was due to differences between individuals within populations, while 21.21% was among populations. The analysis of variance among the pairs of populations demonstrated that the populations located in Floresta, PE x Angicos, RN presented a smaller value of intrapopulational differentiation (8.9%), indicating low genetic variability among them. Nei's genetic distances varied between 0.0546 and 0.1868 in the populations. The dendrogram generated showed that the Canindé breed, used as outgroup, clustered with the populations of Moxotó, indicating a possible common origin of the naturalized goat breeds. |
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Genetic characterization of the Moxotó goat breed using RAPD markersCaracterização genética da raça caprina Moxotó por marcadores RAPDCapra hircus; native breeds; population structure; conservation geneticsCapra hircus; raças nativas; estrutura de populações; conservação genéticaThe objective of this study was to verify the genetic diversity between and within seven populations of Moxotó goat (n = 264) from the States of Pernambuco, Paraíba and Rio Grande do Norte, using RAPD (Random Amplified Polymorphic DNA). Moxotó, as well as other naturalized breeds, suffers genetic losses due to the indiscriminate miscegenation with breeds raised in the Northeast Region of Brazil. The genetic characterization of these genetic resources is essential to conservation and breeding programs. DNA was extracted from lymphocytes using a non-organic protocol. The 16 primers used were selected from 120 decamer oligonucleotide primers and generated 56 polymorphic bands. The analysis of molecular variance (AMOVA) showed that the greater part of total genetic variability (71.55%) was due to differences between individuals within populations, while 21.21% was among populations. The analysis of variance among the pairs of populations demonstrated that the populations located in Floresta, PE x Angicos, RN presented a smaller value of intrapopulational differentiation (8.9%), indicating low genetic variability among them. Nei's genetic distances varied between 0.0546 and 0.1868 in the populations. The dendrogram generated showed that the Canindé breed, used as outgroup, clustered with the populations of Moxotó, indicating a possible common origin of the naturalized goat breeds.O objetivo deste estudo foi verificar a diversidade genética entre e dentro de sete populações de cabras Moxotó (n = 264) dos Estados de Pernambuco, Paraíba e Rio Grande do Norte, usando a técnica de RAPD (Poliformismo de DNA Amplificados ao Acaso). A raça Moxotó, assim como outras naturalizadas, sofre grande erosão genética devido à miscigenação indiscriminada com outras raças existentes na Região Nordeste. A caracterização genética desta raça é essencial para programas de conservação e melhoramento. Os marcadores moleculares são uma ferramenta útil na estimativa da diversidade genética de diferentes populações. O DNA foi extraído a partir de linfócitos utilizando-se um protocolo não orgânico. Os 16 primers utilizados foram selecionados a partir de 120 oligonucleotídeos e geraram 56 bandas polimórficas. A análise de variância molecular (AMOVA) demonstrou que a maior parte da variabilidade genética total (71,55%) ocorreu em virtude das diferenças entre indivíduos dentro das populações, enquanto 21,21% ocorriam entre as populações. A análise da variância entre os pares de populações demonstra que as populações de Floresta, PE x Angicos, RN apresentam o menor valor de diferenciação interpopulacional (8,9%), indicando menor variabilidade entre elas. A distância genética de Nei variou entre 0,0546 e 0,1868 nas populações. O dendrograma gerado demonstra que a raça Canindé, utilizada como outgroup, agrupa-se com as populações de Moxotó, indicando a possível origem comum das raças naturalizadas. Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraOliveira, Rejane Rodrigues deEgito, Andréa Alves doRibeiro, Maria NormaPaiva, Samuel RezendeAlbuquerque, Maria do Socorro MauésCastro, Silvia RibeiroMariante, Arthur da SilviaAdrião, Manuel2005-03-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/6949Pesquisa Agropecuaria Brasileira; v.40, n.3, mar. 2005; 233-239Pesquisa Agropecuária Brasileira; v.40, n.3, mar. 2005; 233-2391678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/6949/3997info:eu-repo/semantics/openAccess2014-09-22T19:01:22Zoai:ojs.seer.sct.embrapa.br:article/6949Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-09-22T19:01:22Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Genetic characterization of the Moxotó goat breed using RAPD markers Caracterização genética da raça caprina Moxotó por marcadores RAPD |
title |
Genetic characterization of the Moxotó goat breed using RAPD markers |
spellingShingle |
Genetic characterization of the Moxotó goat breed using RAPD markers Oliveira, Rejane Rodrigues de Capra hircus; native breeds; population structure; conservation genetics Capra hircus; raças nativas; estrutura de populações; conservação genética |
title_short |
Genetic characterization of the Moxotó goat breed using RAPD markers |
title_full |
Genetic characterization of the Moxotó goat breed using RAPD markers |
title_fullStr |
Genetic characterization of the Moxotó goat breed using RAPD markers |
title_full_unstemmed |
Genetic characterization of the Moxotó goat breed using RAPD markers |
title_sort |
Genetic characterization of the Moxotó goat breed using RAPD markers |
author |
Oliveira, Rejane Rodrigues de |
author_facet |
Oliveira, Rejane Rodrigues de Egito, Andréa Alves do Ribeiro, Maria Norma Paiva, Samuel Rezende Albuquerque, Maria do Socorro Maués Castro, Silvia Ribeiro Mariante, Arthur da Silvia Adrião, Manuel |
author_role |
author |
author2 |
Egito, Andréa Alves do Ribeiro, Maria Norma Paiva, Samuel Rezende Albuquerque, Maria do Socorro Maués Castro, Silvia Ribeiro Mariante, Arthur da Silvia Adrião, Manuel |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
|
dc.contributor.author.fl_str_mv |
Oliveira, Rejane Rodrigues de Egito, Andréa Alves do Ribeiro, Maria Norma Paiva, Samuel Rezende Albuquerque, Maria do Socorro Maués Castro, Silvia Ribeiro Mariante, Arthur da Silvia Adrião, Manuel |
dc.subject.por.fl_str_mv |
Capra hircus; native breeds; population structure; conservation genetics Capra hircus; raças nativas; estrutura de populações; conservação genética |
topic |
Capra hircus; native breeds; population structure; conservation genetics Capra hircus; raças nativas; estrutura de populações; conservação genética |
description |
The objective of this study was to verify the genetic diversity between and within seven populations of Moxotó goat (n = 264) from the States of Pernambuco, Paraíba and Rio Grande do Norte, using RAPD (Random Amplified Polymorphic DNA). Moxotó, as well as other naturalized breeds, suffers genetic losses due to the indiscriminate miscegenation with breeds raised in the Northeast Region of Brazil. The genetic characterization of these genetic resources is essential to conservation and breeding programs. DNA was extracted from lymphocytes using a non-organic protocol. The 16 primers used were selected from 120 decamer oligonucleotide primers and generated 56 polymorphic bands. The analysis of molecular variance (AMOVA) showed that the greater part of total genetic variability (71.55%) was due to differences between individuals within populations, while 21.21% was among populations. The analysis of variance among the pairs of populations demonstrated that the populations located in Floresta, PE x Angicos, RN presented a smaller value of intrapopulational differentiation (8.9%), indicating low genetic variability among them. Nei's genetic distances varied between 0.0546 and 0.1868 in the populations. The dendrogram generated showed that the Canindé breed, used as outgroup, clustered with the populations of Moxotó, indicating a possible common origin of the naturalized goat breeds. |
publishDate |
2005 |
dc.date.none.fl_str_mv |
2005-03-01 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/6949 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/6949 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/6949/3997 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.40, n.3, mar. 2005; 233-239 Pesquisa Agropecuária Brasileira; v.40, n.3, mar. 2005; 233-239 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416664882085888 |