Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods

Detalhes bibliográficos
Autor(a) principal: Cargnelutti Filho, Alberto
Data de Publicação: 2011
Outros Autores: Ribeiro, Nerinéia Dalfollo, Burin, Cláudia
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/4812
Resumo: The objective of this work was to evaluate the clustering pattern consistency in common bean cultivars (Phaseolus vulgaris L.) obtained from the combination of the eight dissimilarity measures and eight clustering methods. Thirteen common bean cultivars were evaluated in nine experiments conducted in the growing seasons between 2000/2001 and 2004/2005 and grouped according to productive (grain yield and number of pods per plant), phenological (number of days between seedling emergence and flowering, and number of days from emergence to harvest) and morphological (height of first pod insertion and height of the final pod insertion) characters. Analyses of variance, correlation, diagnoses of multicollinearity, cluster and comparison of means were carried out. Clustering pattern consistency was evaluated by the cophenetic correlation coefficient. There is variability in the clustering pattern consistency of common bean cultivars, derived from the combination of different dissimilarity measures and clustering methods. Greater clustering pattern consistency in common bean is found with the average linkage between groups method, based on the euclidian distance.
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spelling Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methodsConsistência do padrão de agrupamento de cultivares de feijão conforme medidas de dissimilaridade e métodos de agrupamentoPhaseolus vulgaris; clustering algorithms; cophenetic correlation coefficient; dissimilarity measuresPhaseolus vulgaris; algoritmos de agrupamento; coeficiente de correlação cofenética; medidas de dissimilaridadeThe objective of this work was to evaluate the clustering pattern consistency in common bean cultivars (Phaseolus vulgaris L.) obtained from the combination of the eight dissimilarity measures and eight clustering methods. Thirteen common bean cultivars were evaluated in nine experiments conducted in the growing seasons between 2000/2001 and 2004/2005 and grouped according to productive (grain yield and number of pods per plant), phenological (number of days between seedling emergence and flowering, and number of days from emergence to harvest) and morphological (height of first pod insertion and height of the final pod insertion) characters. Analyses of variance, correlation, diagnoses of multicollinearity, cluster and comparison of means were carried out. Clustering pattern consistency was evaluated by the cophenetic correlation coefficient. There is variability in the clustering pattern consistency of common bean cultivars, derived from the combination of different dissimilarity measures and clustering methods. Greater clustering pattern consistency in common bean is found with the average linkage between groups method, based on the euclidian distance.O objetivo deste trabalho foi avaliar a consistência do padrão de agrupamento de cultivares de feijão (Phaseolus vulgaris L.), obtido a partir da combinação de oito medidas de dissimilaridade e oito métodos de agrupamento. Treze cultivares de feijão foram avaliadas em nove experimentos conduzidos entre os anos agrícolas de 2000/2001 e 2004/2005, e agrupadas de acordo com caracteres de produção (produtividade de grãos, número de vagens por planta), de fenologia (número de dias da emergência ao florescimento e da emergência à colheita) e de morfologia (altura de inserção da primeira e da última vagem). Foram realizadas análises de variância, de correlação, de diagnóstico de multicolinearidade, de agrupamento e de comparação de médias. A consistência do padrão de agrupamento foi avaliada por meio do coeficiente de correlação cofenética. Há variabilidade na consistência do padrão de agrupamento das cultivares de feijão, obtido a partir da combinação de diferentes medidas de dissimilaridade e métodos de agrupamento. Maior consistência nos padrões de agrupamento de cultivares de feijão é verificada com o método da ligação média entre grupo, obtido a partir da matriz de distância euclidiana.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCargnelutti Filho, AlbertoRibeiro, Nerinéia DalfolloBurin, Cláudia2011-01-10info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/4812Pesquisa Agropecuaria Brasileira; v.45, n.3, mar. 2010; 236-243Pesquisa Agropecuária Brasileira; v.45, n.3, mar. 2010; 236-2431678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/4812/6011https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/4812/2909info:eu-repo/semantics/openAccess2012-06-17T11:56:30Zoai:ojs.seer.sct.embrapa.br:article/4812Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2012-06-17T11:56:30Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
Consistência do padrão de agrupamento de cultivares de feijão conforme medidas de dissimilaridade e métodos de agrupamento
title Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
spellingShingle Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
Cargnelutti Filho, Alberto
Phaseolus vulgaris; clustering algorithms; cophenetic correlation coefficient; dissimilarity measures
Phaseolus vulgaris; algoritmos de agrupamento; coeficiente de correlação cofenética; medidas de dissimilaridade
title_short Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
title_full Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
title_fullStr Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
title_full_unstemmed Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
title_sort Clustering pattern consistency of common bean cultivars by dissimilarity measures and clustering methods
author Cargnelutti Filho, Alberto
author_facet Cargnelutti Filho, Alberto
Ribeiro, Nerinéia Dalfollo
Burin, Cláudia
author_role author
author2 Ribeiro, Nerinéia Dalfollo
Burin, Cláudia
author2_role author
author
dc.contributor.none.fl_str_mv

dc.contributor.author.fl_str_mv Cargnelutti Filho, Alberto
Ribeiro, Nerinéia Dalfollo
Burin, Cláudia
dc.subject.por.fl_str_mv Phaseolus vulgaris; clustering algorithms; cophenetic correlation coefficient; dissimilarity measures
Phaseolus vulgaris; algoritmos de agrupamento; coeficiente de correlação cofenética; medidas de dissimilaridade
topic Phaseolus vulgaris; clustering algorithms; cophenetic correlation coefficient; dissimilarity measures
Phaseolus vulgaris; algoritmos de agrupamento; coeficiente de correlação cofenética; medidas de dissimilaridade
description The objective of this work was to evaluate the clustering pattern consistency in common bean cultivars (Phaseolus vulgaris L.) obtained from the combination of the eight dissimilarity measures and eight clustering methods. Thirteen common bean cultivars were evaluated in nine experiments conducted in the growing seasons between 2000/2001 and 2004/2005 and grouped according to productive (grain yield and number of pods per plant), phenological (number of days between seedling emergence and flowering, and number of days from emergence to harvest) and morphological (height of first pod insertion and height of the final pod insertion) characters. Analyses of variance, correlation, diagnoses of multicollinearity, cluster and comparison of means were carried out. Clustering pattern consistency was evaluated by the cophenetic correlation coefficient. There is variability in the clustering pattern consistency of common bean cultivars, derived from the combination of different dissimilarity measures and clustering methods. Greater clustering pattern consistency in common bean is found with the average linkage between groups method, based on the euclidian distance.
publishDate 2011
dc.date.none.fl_str_mv 2011-01-10
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
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dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/4812
url https://seer.sct.embrapa.br/index.php/pab/article/view/4812
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/4812/6011
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/4812/2909
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.45, n.3, mar. 2010; 236-243
Pesquisa Agropecuária Brasileira; v.45, n.3, mar. 2010; 236-243
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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