Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato

Detalhes bibliográficos
Autor(a) principal: Amaral, Daniel Oliveira Jordão do
Data de Publicação: 2008
Outros Autores: Lima, Marleide Magalhães de Andrade, Resende, Luciane Vilela, Silva, Márcia Vanusa da
Tipo de documento: Artigo
Idioma: por
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/565
Resumo: The objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences.
id EMBRAPA-4_a59f92d006acce534dc733ec08008128
oai_identifier_str oai:ojs.seer.sct.embrapa.br:article/565
network_acronym_str EMBRAPA-4
network_name_str Pesquisa Agropecuária Brasileira (Online)
repository_id_str
spelling Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomatoExpressão diferencial de genes induzida por ácido salicílico e por Fusarium oxysporum f. sp. lycopersici, em tomateiroLycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridizationLycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressãoThe objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences.O objetivo deste trabalho foi determinar o perfi l de transcritos em plantas de tomate (Lycopersicon esculentum Mill.), durante a infecção com Fusarium oxysporum f. sp. lycopersici e após a aplicação foliarde ácido salicílico. A técnica de hibridização subtrativa por supressão (SSH) foi utilizada para gerar uma biblioteca de cDNA enriquecida por transcritos diferencialmente expressos. Foram identifi cados 307 clones,em duas bibliotecas subtrativas, que permitiram o isolamento de diversos genes de defesa com função em diferentes processos relacionados à resistência vegetal contra patógenos. Também foram isolados, nas duasbibliotecas, genes com função desconhecida, o que indica a possibilidade de identifi cação de novos genes que ainda não tenham sido relatados em estudos anteriores de resposta a estresses e defesa, em plantas. A técnica SSH é efi ciente em identifi car genes de resistência, ativados pelo ácido salicílico e pela infecção com Fusarium oxysporum f. sp. lycopersici. A aplicação dessa técnica não apenas possibilita isolar seqüências diferencialmente expressas, a baixo custo, como também permite a identifi cação de novas seqüências, em tomate, a partir de umnúmero relativamente pequeno de seqüências.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCNPq/MCT/FACEPE.Amaral, Daniel Oliveira Jordão doLima, Marleide Magalhães de AndradeResende, Luciane VilelaSilva, Márcia Vanusa da2008-10-28info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/565Pesquisa Agropecuaria Brasileira; v.43, n.8, ago. 2008; 1017-1023Pesquisa Agropecuária Brasileira; v.43, n.8, ago. 2008; 1017-10231678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/565/5610info:eu-repo/semantics/openAccess2014-07-16T18:44:29Zoai:ojs.seer.sct.embrapa.br:article/565Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-07-16T18:44:29Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
Expressão diferencial de genes induzida por ácido salicílico e por Fusarium oxysporum f. sp. lycopersici, em tomateiro
title Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
spellingShingle Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
Amaral, Daniel Oliveira Jordão do
Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization
Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão
title_short Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
title_full Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
title_fullStr Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
title_full_unstemmed Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
title_sort Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
author Amaral, Daniel Oliveira Jordão do
author_facet Amaral, Daniel Oliveira Jordão do
Lima, Marleide Magalhães de Andrade
Resende, Luciane Vilela
Silva, Márcia Vanusa da
author_role author
author2 Lima, Marleide Magalhães de Andrade
Resende, Luciane Vilela
Silva, Márcia Vanusa da
author2_role author
author
author
dc.contributor.none.fl_str_mv
CNPq/MCT/FACEPE.
dc.contributor.author.fl_str_mv Amaral, Daniel Oliveira Jordão do
Lima, Marleide Magalhães de Andrade
Resende, Luciane Vilela
Silva, Márcia Vanusa da
dc.subject.por.fl_str_mv Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization
Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão
topic Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization
Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão
description The objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences.
publishDate 2008
dc.date.none.fl_str_mv 2008-10-28
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/565
url https://seer.sct.embrapa.br/index.php/pab/article/view/565
dc.language.iso.fl_str_mv por
language por
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/565/5610
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.43, n.8, ago. 2008; 1017-1023
Pesquisa Agropecuária Brasileira; v.43, n.8, ago. 2008; 1017-1023
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Pesquisa Agropecuária Brasileira (Online)
collection Pesquisa Agropecuária Brasileira (Online)
repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
_version_ 1793416681650913280