Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | por |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/565 |
Resumo: | The objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences. |
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Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomatoExpressão diferencial de genes induzida por ácido salicílico e por Fusarium oxysporum f. sp. lycopersici, em tomateiroLycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridizationLycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressãoThe objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences.O objetivo deste trabalho foi determinar o perfi l de transcritos em plantas de tomate (Lycopersicon esculentum Mill.), durante a infecção com Fusarium oxysporum f. sp. lycopersici e após a aplicação foliarde ácido salicílico. A técnica de hibridização subtrativa por supressão (SSH) foi utilizada para gerar uma biblioteca de cDNA enriquecida por transcritos diferencialmente expressos. Foram identifi cados 307 clones,em duas bibliotecas subtrativas, que permitiram o isolamento de diversos genes de defesa com função em diferentes processos relacionados à resistência vegetal contra patógenos. Também foram isolados, nas duasbibliotecas, genes com função desconhecida, o que indica a possibilidade de identifi cação de novos genes que ainda não tenham sido relatados em estudos anteriores de resposta a estresses e defesa, em plantas. A técnica SSH é efi ciente em identifi car genes de resistência, ativados pelo ácido salicílico e pela infecção com Fusarium oxysporum f. sp. lycopersici. A aplicação dessa técnica não apenas possibilita isolar seqüências diferencialmente expressas, a baixo custo, como também permite a identifi cação de novas seqüências, em tomate, a partir de umnúmero relativamente pequeno de seqüências.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCNPq/MCT/FACEPE.Amaral, Daniel Oliveira Jordão doLima, Marleide Magalhães de AndradeResende, Luciane VilelaSilva, Márcia Vanusa da2008-10-28info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/565Pesquisa Agropecuaria Brasileira; v.43, n.8, ago. 2008; 1017-1023Pesquisa Agropecuária Brasileira; v.43, n.8, ago. 2008; 1017-10231678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAporhttps://seer.sct.embrapa.br/index.php/pab/article/view/565/5610info:eu-repo/semantics/openAccess2014-07-16T18:44:29Zoai:ojs.seer.sct.embrapa.br:article/565Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-07-16T18:44:29Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato Expressão diferencial de genes induzida por ácido salicílico e por Fusarium oxysporum f. sp. lycopersici, em tomateiro |
title |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
spellingShingle |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato Amaral, Daniel Oliveira Jordão do Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão |
title_short |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
title_full |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
title_fullStr |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
title_full_unstemmed |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
title_sort |
Differential gene expression, induced by salicylic acid and Fusarium oxysporum f. sp. lycopersici infection, in tomato |
author |
Amaral, Daniel Oliveira Jordão do |
author_facet |
Amaral, Daniel Oliveira Jordão do Lima, Marleide Magalhães de Andrade Resende, Luciane Vilela Silva, Márcia Vanusa da |
author_role |
author |
author2 |
Lima, Marleide Magalhães de Andrade Resende, Luciane Vilela Silva, Márcia Vanusa da |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
CNPq/MCT/FACEPE. |
dc.contributor.author.fl_str_mv |
Amaral, Daniel Oliveira Jordão do Lima, Marleide Magalhães de Andrade Resende, Luciane Vilela Silva, Márcia Vanusa da |
dc.subject.por.fl_str_mv |
Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão |
topic |
Lycopersicon esculentum; cDNA libraries; complementary DNA; gene expression; salicylic acids; suppression subtractive hybridization Lycopersicon esculentum; bibliotecas de cDNA; DNA complementar; expressão gênica; ácido salicílico; hibridização subtrativa por supressão |
description |
The objective of this work was to determine the transcript profi le of tomato plants (Lycopersicon esculentum Mill.), during Fusarium oxysporum f. sp. lycopersici infection and after foliar application of salicylic acid. The suppression subtractive hybridization (SSH) technique was used to generate a cDNA library enriched for transcripts differentially expressed. A total of 307 clones was identifi ed in two subtractive libraries, which allowed the isolation of several defense-related genes that play roles in different mechanisms of plant resistanceto phytopathogens. Genes with unknown roles were also isolated from the two libraries, which indicates the possibility of identifying new genes not yet reported in studies of stress/defense response. The SSH technique is effective for identifi cation of resistance genes activated by salicylic acid and F. oxysporum f. sp. lycopersici infection. Not only the application of this technique enables a cost effective isolation of differentially expressed sequences, but also it allows the identifi cation of novel sequences in tomato from a relative small number ofsequences. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-10-28 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/565 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/565 |
dc.language.iso.fl_str_mv |
por |
language |
por |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/565/5610 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.43, n.8, ago. 2008; 1017-1023 Pesquisa Agropecuária Brasileira; v.43, n.8, ago. 2008; 1017-1023 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416681650913280 |