Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites
Autor(a) principal: | |
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Data de Publicação: | 2007 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Pesquisa Agropecuária Brasileira (Online) |
Texto Completo: | https://seer.sct.embrapa.br/index.php/pab/article/view/7735 |
Resumo: | The objective of this work was to determine the genetic variability available for triticale (X Triticosecale Wittmack) crop improvement in Brazil. Forty-two wheat genomic microsatellites were used to estimate the molecular diversity of 54 genotypes, which constitute the base of one of the major triticale breeding programs in the country. Average heterozygosity was 0.06 and average and effective number of alleles per locus were 2.13 and 1.61, respectively, with average allelic frequency of 0.34. The set of genomic wheat microsatellites used clustered the genotypes into seven groups, even when the germplasm was originated primarily from only two triticale breeding programs, a fact reflected on the average polymorphic information content value estimated for the germplasm (0.36). The 71.42% transferability achieved for the tested microsatellites indicates the possibility of exploiting these transferable markers in further triticale genetic and breeding studies, even those mapped on the D genome of wheat, when analyzing hexaploid triticales. |
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Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellitesDiversidade genética de triticales brasileiros avaliada com microssatélites genômicos de trigoX Triticosecale; polymorphism information content; transferability; heterozygosity; number of alleles; frequency of allelesX Triticosecale; índice de polimorfismo; transferabilidade; heterozigosidade; número efetivo de alelos; freqüência alélicaThe objective of this work was to determine the genetic variability available for triticale (X Triticosecale Wittmack) crop improvement in Brazil. Forty-two wheat genomic microsatellites were used to estimate the molecular diversity of 54 genotypes, which constitute the base of one of the major triticale breeding programs in the country. Average heterozygosity was 0.06 and average and effective number of alleles per locus were 2.13 and 1.61, respectively, with average allelic frequency of 0.34. The set of genomic wheat microsatellites used clustered the genotypes into seven groups, even when the germplasm was originated primarily from only two triticale breeding programs, a fact reflected on the average polymorphic information content value estimated for the germplasm (0.36). The 71.42% transferability achieved for the tested microsatellites indicates the possibility of exploiting these transferable markers in further triticale genetic and breeding studies, even those mapped on the D genome of wheat, when analyzing hexaploid triticales.O objetivo deste trabalho foi determinar a variabilidade disponível para o melhoramento de triticale (X Triticosecale Wittmack) no Brasil. Quarenta e dois microssatélites de trigo foram empregados para estimar a diversidade molecular de 54 genótipos, que constituem a base de um dos principais programas de melhoramento da espécie no país. A heterozigosidade média foi 0,06, e os números médio e efetivo de alelos por lócus foram de 2,13 e 1,61, respectivamente, com freqüência alélica média de 0,34. O conjunto de microssatélites de trigo possibilitou reunir os genótipos em sete grupos, mesmo que o germoplasma utilizado seja originado de apenas duas instituições de pesquisa, o que refletiu em baixo índice de polimorfismo médio (0,36). A taxa de transferência dos marcadores testados (71,42%) indica a possibilidade de uso desses microssatélites de trigo, até mesmo os mapeados no genoma D da espécie, na análise de triticales hexaplóides em futuros trabalhos de genética e melhoramento de triticale.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCosta, Cibele Tesser daAlbuquerque, Ana Christina SagebinNascimento Junior, Alfredo doMarcelino, Francismar CorreaPereira, Jorge Fernando2007-11-01info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/7735Pesquisa Agropecuaria Brasileira; v.42, n.11, nov. 2007; 1577-1586Pesquisa Agropecuária Brasileira; v.42, n.11, nov. 2007; 1577-15861678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/7735/4654info:eu-repo/semantics/openAccess2014-10-13T19:31:30Zoai:ojs.seer.sct.embrapa.br:article/7735Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2014-10-13T19:31:30Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false |
dc.title.none.fl_str_mv |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites Diversidade genética de triticales brasileiros avaliada com microssatélites genômicos de trigo |
title |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
spellingShingle |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites Costa, Cibele Tesser da X Triticosecale; polymorphism information content; transferability; heterozygosity; number of alleles; frequency of alleles X Triticosecale; índice de polimorfismo; transferabilidade; heterozigosidade; número efetivo de alelos; freqüência alélica |
title_short |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
title_full |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
title_fullStr |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
title_full_unstemmed |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
title_sort |
Genetic diversity of Brazilian triticales evaluated with genomic wheat microsatellites |
author |
Costa, Cibele Tesser da |
author_facet |
Costa, Cibele Tesser da Albuquerque, Ana Christina Sagebin Nascimento Junior, Alfredo do Marcelino, Francismar Correa Pereira, Jorge Fernando |
author_role |
author |
author2 |
Albuquerque, Ana Christina Sagebin Nascimento Junior, Alfredo do Marcelino, Francismar Correa Pereira, Jorge Fernando |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
|
dc.contributor.author.fl_str_mv |
Costa, Cibele Tesser da Albuquerque, Ana Christina Sagebin Nascimento Junior, Alfredo do Marcelino, Francismar Correa Pereira, Jorge Fernando |
dc.subject.por.fl_str_mv |
X Triticosecale; polymorphism information content; transferability; heterozygosity; number of alleles; frequency of alleles X Triticosecale; índice de polimorfismo; transferabilidade; heterozigosidade; número efetivo de alelos; freqüência alélica |
topic |
X Triticosecale; polymorphism information content; transferability; heterozygosity; number of alleles; frequency of alleles X Triticosecale; índice de polimorfismo; transferabilidade; heterozigosidade; número efetivo de alelos; freqüência alélica |
description |
The objective of this work was to determine the genetic variability available for triticale (X Triticosecale Wittmack) crop improvement in Brazil. Forty-two wheat genomic microsatellites were used to estimate the molecular diversity of 54 genotypes, which constitute the base of one of the major triticale breeding programs in the country. Average heterozygosity was 0.06 and average and effective number of alleles per locus were 2.13 and 1.61, respectively, with average allelic frequency of 0.34. The set of genomic wheat microsatellites used clustered the genotypes into seven groups, even when the germplasm was originated primarily from only two triticale breeding programs, a fact reflected on the average polymorphic information content value estimated for the germplasm (0.36). The 71.42% transferability achieved for the tested microsatellites indicates the possibility of exploiting these transferable markers in further triticale genetic and breeding studies, even those mapped on the D genome of wheat, when analyzing hexaploid triticales. |
publishDate |
2007 |
dc.date.none.fl_str_mv |
2007-11-01 |
dc.type.none.fl_str_mv |
|
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/7735 |
url |
https://seer.sct.embrapa.br/index.php/pab/article/view/7735 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
https://seer.sct.embrapa.br/index.php/pab/article/view/7735/4654 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
application/pdf |
dc.publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
publisher.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira Pesquisa Agropecuária Brasileira |
dc.source.none.fl_str_mv |
Pesquisa Agropecuaria Brasileira; v.42, n.11, nov. 2007; 1577-1586 Pesquisa Agropecuária Brasileira; v.42, n.11, nov. 2007; 1577-1586 1678-3921 0100-104x reponame:Pesquisa Agropecuária Brasileira (Online) instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa) instacron:EMBRAPA |
instname_str |
Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
instacron_str |
EMBRAPA |
institution |
EMBRAPA |
reponame_str |
Pesquisa Agropecuária Brasileira (Online) |
collection |
Pesquisa Agropecuária Brasileira (Online) |
repository.name.fl_str_mv |
Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa) |
repository.mail.fl_str_mv |
pab@sct.embrapa.br || sct.pab@embrapa.br |
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1793416676745674752 |