Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers

Detalhes bibliográficos
Autor(a) principal: Priori, Daniela
Data de Publicação: 2018
Outros Autores: Villarreal, Daniel Zizumbo, Ek, Victor Manuel de Jesús Canché, Briones, Verónica Limones, Barbieri, Rosa Lía
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Pesquisa Agropecuária Brasileira (Online)
Texto Completo: https://seer.sct.embrapa.br/index.php/pab/article/view/24856
Resumo: The objective of this work was to evaluate the evolutionary dynamics of the wild-weedy-domestic gene pool of Cucurbita argyrosperma squash by estimating the levels of genetic diversity and gene flow in the putative area of its domestication. Nine populations were collected, and DNA was extracted from young leaves harvested separately from approximately 20 individuals in each population. The DNA fragments were amplified with eight pairs of SSR primers and separated by electrophoresis in 5% denaturing polyacrylamide gels. Genetic diversity and the amount of gene flow were estimated in the populations, and Bayesian grouping was used to determine the levels of gene infiltration and probability of ancestry. The ethnobotanical exploration indicated that the evolutionary dynamics in the area occurred under five different ecological scenarios. Eighty-seven alleles with 75% to 100% polymorphic loci were identified. The greater genetic diversity in the weedy-domestic populations may have been the product of recombination due to the high gene flow between these populations promoted by pollinators and human selection. There is high gene flow between the wild and cultivated populations of C. argyrosperma in its domestication centre, highlighting the importance of conserving and maintaining these genetic resources. 
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spelling Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markersDinâmica evolutiva de Cucurbita argyosperma do centro mesoamericano de domesticação por meio de marcadores moleculares SSRCucurbitaceae; genetic diversity; microsatellite markers; plant genetic resources; squashCucurbitaceae; diversidade genética; marcadores microssatélites; recursos fitogenéticos; abóboraThe objective of this work was to evaluate the evolutionary dynamics of the wild-weedy-domestic gene pool of Cucurbita argyrosperma squash by estimating the levels of genetic diversity and gene flow in the putative area of its domestication. Nine populations were collected, and DNA was extracted from young leaves harvested separately from approximately 20 individuals in each population. The DNA fragments were amplified with eight pairs of SSR primers and separated by electrophoresis in 5% denaturing polyacrylamide gels. Genetic diversity and the amount of gene flow were estimated in the populations, and Bayesian grouping was used to determine the levels of gene infiltration and probability of ancestry. The ethnobotanical exploration indicated that the evolutionary dynamics in the area occurred under five different ecological scenarios. Eighty-seven alleles with 75% to 100% polymorphic loci were identified. The greater genetic diversity in the weedy-domestic populations may have been the product of recombination due to the high gene flow between these populations promoted by pollinators and human selection. There is high gene flow between the wild and cultivated populations of C. argyrosperma in its domestication centre, highlighting the importance of conserving and maintaining these genetic resources. O objetivo deste trabalho foi avaliar a dinâmica evolutiva do pool genético silvestre-arvense-doméstico da abóbora (Cucurbita argyrosperma) ao estimar os níveis de diversidade genética e o fluxo gênico em sua provável área domesticação. Foram coletadas nove populações, tendo-se extraído o DNA de folhas jovens de cerca de 20 plantas de cada população. Os fragmentos de DNA foram amplificados por meio de oito pares de iniciadores de sequência simples repetida (SSR) e separados por eletroforese em 5% de gel de desnaturação de poliacrilamida. Estimaram-se a diversidade genética e o fluxo gênico para as populações, e utilizou-se o agrupamento bayesiano para determinar os níveis de infiltração gênica e probabilidade de ancestralidade. A investigação etnobotânica mostrou que a dinâmica evolutiva na área ocorreu em cinco cenários ecológicos diferentes. Foram identificados 87 alelos com 75 e 100% de loci polimórficos. A maior diversidade genética nas populações arvense-domésticas pode ter sido resultante da recombinação devido ao alto fluxo gênico entre estas populações, ocasionado pelos polinizadores e pela seleção humana. Há grande fluxo gênico entre as populações silvestres e cultivadas de C. argyrosperma no centro de domesticação, o que indica a importância da conservação e da manutenção destes recursos genéticos.Pesquisa Agropecuaria BrasileiraPesquisa Agropecuária BrasileiraCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Centro de Investigación Científica de Yucatán (CICY)Priori, DanielaVillarreal, Daniel ZizumboEk, Victor Manuel de Jesús CanchéBriones, Verónica LimonesBarbieri, Rosa Lía2018-05-08info:eu-repo/semantics/articleinfo:eu-repo/semantics/publishedVersionapplication/pdfhttps://seer.sct.embrapa.br/index.php/pab/article/view/24856Pesquisa Agropecuaria Brasileira; v.53, n.3, mar. 2018; 287-297Pesquisa Agropecuária Brasileira; v.53, n.3, mar. 2018; 287-2971678-39210100-104xreponame:Pesquisa Agropecuária Brasileira (Online)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPAenghttps://seer.sct.embrapa.br/index.php/pab/article/view/24856/14158https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/24856/16700Direitos autorais 2018 Pesquisa Agropecuária Brasileirainfo:eu-repo/semantics/openAccess2018-05-08T11:31:42Zoai:ojs.seer.sct.embrapa.br:article/24856Revistahttp://seer.sct.embrapa.br/index.php/pabPRIhttps://old.scielo.br/oai/scielo-oai.phppab@sct.embrapa.br || sct.pab@embrapa.br1678-39210100-204Xopendoar:2018-05-08T11:31:42Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv
Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
Dinâmica evolutiva de Cucurbita argyosperma do centro mesoamericano de domesticação por meio de marcadores moleculares SSR
title Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
spellingShingle Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
Priori, Daniela
Cucurbitaceae; genetic diversity; microsatellite markers; plant genetic resources; squash
Cucurbitaceae; diversidade genética; marcadores microssatélites; recursos fitogenéticos; abóbora
title_short Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
title_full Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
title_fullStr Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
title_full_unstemmed Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
title_sort Evolutionary dynamics of Cucurbita argyrosperma from the Mesoamerican domestication center using SSR molecular markers
author Priori, Daniela
author_facet Priori, Daniela
Villarreal, Daniel Zizumbo
Ek, Victor Manuel de Jesús Canché
Briones, Verónica Limones
Barbieri, Rosa Lía
author_role author
author2 Villarreal, Daniel Zizumbo
Ek, Victor Manuel de Jesús Canché
Briones, Verónica Limones
Barbieri, Rosa Lía
author2_role author
author
author
author
dc.contributor.none.fl_str_mv

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes)
Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
Centro de Investigación Científica de Yucatán (CICY)
dc.contributor.author.fl_str_mv Priori, Daniela
Villarreal, Daniel Zizumbo
Ek, Victor Manuel de Jesús Canché
Briones, Verónica Limones
Barbieri, Rosa Lía
dc.subject.none.fl_str_mv
dc.subject.por.fl_str_mv Cucurbitaceae; genetic diversity; microsatellite markers; plant genetic resources; squash
Cucurbitaceae; diversidade genética; marcadores microssatélites; recursos fitogenéticos; abóbora
topic Cucurbitaceae; genetic diversity; microsatellite markers; plant genetic resources; squash
Cucurbitaceae; diversidade genética; marcadores microssatélites; recursos fitogenéticos; abóbora
description The objective of this work was to evaluate the evolutionary dynamics of the wild-weedy-domestic gene pool of Cucurbita argyrosperma squash by estimating the levels of genetic diversity and gene flow in the putative area of its domestication. Nine populations were collected, and DNA was extracted from young leaves harvested separately from approximately 20 individuals in each population. The DNA fragments were amplified with eight pairs of SSR primers and separated by electrophoresis in 5% denaturing polyacrylamide gels. Genetic diversity and the amount of gene flow were estimated in the populations, and Bayesian grouping was used to determine the levels of gene infiltration and probability of ancestry. The ethnobotanical exploration indicated that the evolutionary dynamics in the area occurred under five different ecological scenarios. Eighty-seven alleles with 75% to 100% polymorphic loci were identified. The greater genetic diversity in the weedy-domestic populations may have been the product of recombination due to the high gene flow between these populations promoted by pollinators and human selection. There is high gene flow between the wild and cultivated populations of C. argyrosperma in its domestication centre, highlighting the importance of conserving and maintaining these genetic resources. 
publishDate 2018
dc.date.none.fl_str_mv 2018-05-08
dc.type.none.fl_str_mv
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
info:eu-repo/semantics/publishedVersion
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/24856
url https://seer.sct.embrapa.br/index.php/pab/article/view/24856
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv https://seer.sct.embrapa.br/index.php/pab/article/view/24856/14158
https://seer.sct.embrapa.br/index.php/pab/article/downloadSuppFile/24856/16700
dc.rights.driver.fl_str_mv Direitos autorais 2018 Pesquisa Agropecuária Brasileira
info:eu-repo/semantics/openAccess
rights_invalid_str_mv Direitos autorais 2018 Pesquisa Agropecuária Brasileira
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
publisher.none.fl_str_mv Pesquisa Agropecuaria Brasileira
Pesquisa Agropecuária Brasileira
dc.source.none.fl_str_mv Pesquisa Agropecuaria Brasileira; v.53, n.3, mar. 2018; 287-297
Pesquisa Agropecuária Brasileira; v.53, n.3, mar. 2018; 287-297
1678-3921
0100-104x
reponame:Pesquisa Agropecuária Brasileira (Online)
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repository.name.fl_str_mv Pesquisa Agropecuária Brasileira (Online) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv pab@sct.embrapa.br || sct.pab@embrapa.br
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