Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.

Detalhes bibliográficos
Autor(a) principal: DINIZ, W. J. da S.
Data de Publicação: 2016
Outros Autores: COUTINHO, L. L., TIZIOTO, P. C., CESAR, A. S. M., GROMBONI, C. F., NOGUEIRA, A. R. de A., OLIVEIRA, P. S. N. de, SOUZA, M. M. de, REGITANO, L. C. de A.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1055127
http://dx.doi.org/10.1371/journal.pone.0161160
Resumo: Iron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to investigate the likely role of these DE genes in biological processes underlying beef quality parameters. Samples for RNA extraction for sequencing and iron, copper, manganese, and zinc determination were collected from LD muscles at slaughter. Eight Nelore steers, with extreme genomic estimated breeding values for iron content (Fe-GEBV), were selected from a reference population of 373 animals. From the 49 annotated DE genes (FDR<0.05) found between the two groups, 18 were upregulated and 31 down-regulated for the animals in the low Fe-GEBV group. The functional enrichment analyses identified several biological processes, such as lipid transport and metabolism, and cell growth. Lipid metabolism was the main pathway observed in the analysis of metabolic and canonical signaling pathways for the genes identified as DE, including the genes FASN, FABP4, and THRSP, which are functional candidates for beef quality, suggesting reduced lipogenic activities with lower iron content. Our results indicate metabolic pathways that are partially influenced by iron, contributing to a better understanding of its participation in skeletal muscle physiology.
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spelling Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.Fisiologia esquelético muscularMetabolismo lipídicoGado NeloreFerroNelloreIron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to investigate the likely role of these DE genes in biological processes underlying beef quality parameters. Samples for RNA extraction for sequencing and iron, copper, manganese, and zinc determination were collected from LD muscles at slaughter. Eight Nelore steers, with extreme genomic estimated breeding values for iron content (Fe-GEBV), were selected from a reference population of 373 animals. From the 49 annotated DE genes (FDR<0.05) found between the two groups, 18 were upregulated and 31 down-regulated for the animals in the low Fe-GEBV group. The functional enrichment analyses identified several biological processes, such as lipid transport and metabolism, and cell growth. Lipid metabolism was the main pathway observed in the analysis of metabolic and canonical signaling pathways for the genes identified as DE, including the genes FASN, FABP4, and THRSP, which are functional candidates for beef quality, suggesting reduced lipogenic activities with lower iron content. Our results indicate metabolic pathways that are partially influenced by iron, contributing to a better understanding of its participation in skeletal muscle physiology.WELLISON JARLES DA SILVA DINIZ, UFSCAR; LUIZ LEHMANN COUTINHO, USP; POLYANA CRISTINE TIZIOTO, FAPESP; ALINE SILVA MELLO CESAR, USP/ESALQ; CAIO FERNANDO GROMBONI, UFBA; ANA RITA DE ARAUJO NOGUEIRA, CPPSE; PRISCILA SILVA NEUBERN DE OLIVEIRA, FAPESP; MARCELA MARIA DE SOUZA, UFSCAR; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE.DINIZ, W. J. da S.COUTINHO, L. L.TIZIOTO, P. C.CESAR, A. S. M.GROMBONI, C. F.NOGUEIRA, A. R. de A.OLIVEIRA, P. S. N. deSOUZA, M. M. deREGITANO, L. C. de A.2019-04-02T00:32:02Z2019-04-02T00:32:02Z2016-10-2020162019-04-02T00:32:02Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlePlos One, aug. 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1055127http://dx.doi.org/10.1371/journal.pone.0161160enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-04-02T00:32:09Zoai:www.alice.cnptia.embrapa.br:doc/1055127Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-04-02T00:32:09falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-04-02T00:32:09Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
title Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
spellingShingle Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
DINIZ, W. J. da S.
Fisiologia esquelético muscular
Metabolismo lipídico
Gado Nelore
Ferro
Nellore
title_short Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
title_full Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
title_fullStr Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
title_full_unstemmed Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
title_sort Iron content affects lipogenic gene expression in the muscle of nelore beef cattle.
author DINIZ, W. J. da S.
author_facet DINIZ, W. J. da S.
COUTINHO, L. L.
TIZIOTO, P. C.
CESAR, A. S. M.
GROMBONI, C. F.
NOGUEIRA, A. R. de A.
OLIVEIRA, P. S. N. de
SOUZA, M. M. de
REGITANO, L. C. de A.
author_role author
author2 COUTINHO, L. L.
TIZIOTO, P. C.
CESAR, A. S. M.
GROMBONI, C. F.
NOGUEIRA, A. R. de A.
OLIVEIRA, P. S. N. de
SOUZA, M. M. de
REGITANO, L. C. de A.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv WELLISON JARLES DA SILVA DINIZ, UFSCAR; LUIZ LEHMANN COUTINHO, USP; POLYANA CRISTINE TIZIOTO, FAPESP; ALINE SILVA MELLO CESAR, USP/ESALQ; CAIO FERNANDO GROMBONI, UFBA; ANA RITA DE ARAUJO NOGUEIRA, CPPSE; PRISCILA SILVA NEUBERN DE OLIVEIRA, FAPESP; MARCELA MARIA DE SOUZA, UFSCAR; LUCIANA CORREIA DE ALMEIDA REGITANO, CPPSE.
dc.contributor.author.fl_str_mv DINIZ, W. J. da S.
COUTINHO, L. L.
TIZIOTO, P. C.
CESAR, A. S. M.
GROMBONI, C. F.
NOGUEIRA, A. R. de A.
OLIVEIRA, P. S. N. de
SOUZA, M. M. de
REGITANO, L. C. de A.
dc.subject.por.fl_str_mv Fisiologia esquelético muscular
Metabolismo lipídico
Gado Nelore
Ferro
Nellore
topic Fisiologia esquelético muscular
Metabolismo lipídico
Gado Nelore
Ferro
Nellore
description Iron (Fe) is an essential mineral for metabolism and plays a central role in a range of biochemical processes. Therefore, this study aimed to identify differentially expressed (DE) genes and metabolic pathways in Longissimus dorsi (LD) muscle from cattle with divergent iron content, as well as to investigate the likely role of these DE genes in biological processes underlying beef quality parameters. Samples for RNA extraction for sequencing and iron, copper, manganese, and zinc determination were collected from LD muscles at slaughter. Eight Nelore steers, with extreme genomic estimated breeding values for iron content (Fe-GEBV), were selected from a reference population of 373 animals. From the 49 annotated DE genes (FDR<0.05) found between the two groups, 18 were upregulated and 31 down-regulated for the animals in the low Fe-GEBV group. The functional enrichment analyses identified several biological processes, such as lipid transport and metabolism, and cell growth. Lipid metabolism was the main pathway observed in the analysis of metabolic and canonical signaling pathways for the genes identified as DE, including the genes FASN, FABP4, and THRSP, which are functional candidates for beef quality, suggesting reduced lipogenic activities with lower iron content. Our results indicate metabolic pathways that are partially influenced by iron, contributing to a better understanding of its participation in skeletal muscle physiology.
publishDate 2016
dc.date.none.fl_str_mv 2016-10-20
2016
2019-04-02T00:32:02Z
2019-04-02T00:32:02Z
2019-04-02T00:32:02Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Plos One, aug. 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1055127
http://dx.doi.org/10.1371/journal.pone.0161160
identifier_str_mv Plos One, aug. 2016.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1055127
http://dx.doi.org/10.1371/journal.pone.0161160
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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