Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.

Detalhes bibliográficos
Autor(a) principal: BITTENCOURT, C. B.
Data de Publicação: 2023
Outros Autores: SILVA, T. L. C. da, RODRIGUES NETO, J. C., LEAO, A. P., RIBEIRO, J. A. de A., MAIA, A. de H. N., SOUSA, C. A. F. de, QUIRINO, B. F., SOUZA JÚNIOR, M. T.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1158480
https://doi.org/10.3390/ijms241612918
Resumo: Abstract: An oil palm (Elaeis guineensis Jacq.) bud rod disorder of unknown etiology, named Fatal Yellowing (FY) disease, is regarded as one of the top constraints with respect to the growth of the palm oil industry in Brazil. FY etiology has been a challenge embraced by several research groups in plant pathology throughout the last 50 years in Brazil, with no success in completing Koch?s postulates. Most recently, the hypothesis of having an abiotic stressor as the initial cause of FY has gained ground, and oxygen deficiency (hypoxia) damaging the root system has become a candidate for stress. Here, a comprehensive, large-scale, single- and multi-omics integration analysis of the metabolome and transcriptome profiles on the leaves of oil palm plants contrasting in terms of FY symptomatology?asymptomatic and symptomatic?and collected in two distinct seasons?dry and rainy?is reported. The changes observed in the physicochemical attributes of the soil and the chemical attributes and metabolome profiles of the leaves did not allow the discrimination of plants which were asymptomatic or symptomatic for this disease, not even in the rainy season, when the soil became waterlogged. However, the multi-omics integration analysis of enzymes and metabolites differentially expressed in asymptomatic and/or symptomatic plants in the rainy season compared to the dry season allowed the identification of the metabolic pathways most affected by the changes in the environment, opening an opportunity for additional characterization of the role of hypoxia in FY symptom intensification. Finally, the initial analysis of a set of 56 proteins/genes differentially expressed in symptomatic plants compared to the asymptomatic ones, independent of the season, has presented pieces of evidence suggesting that breaks in the non-host resistance to non-adapted pathogens and the basal immunity to adapted pathogens, caused by the anaerobic conditions experienced by the plants, might be linked to the onset of this disease. This set of genes might offer the opportunity to develop biomarkers for selecting oil palm plants resistant to this disease and to help pave the way to employing strategies to keep the safety barriers raised and strong.
id EMBR_1163ae06f2c6cd6176218a091f7e6cc4
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1158480
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.CatalysisBud rotFatal yellowingMolecular mechanismsElaeis GuineensisDoença de PlantaBiologia MolecularGene MarcadorPalm oilsPlant diseases and disordersGenetic markersHypoxiaTranscriptomicsMetabolomicsspectroscopyAbstract: An oil palm (Elaeis guineensis Jacq.) bud rod disorder of unknown etiology, named Fatal Yellowing (FY) disease, is regarded as one of the top constraints with respect to the growth of the palm oil industry in Brazil. FY etiology has been a challenge embraced by several research groups in plant pathology throughout the last 50 years in Brazil, with no success in completing Koch?s postulates. Most recently, the hypothesis of having an abiotic stressor as the initial cause of FY has gained ground, and oxygen deficiency (hypoxia) damaging the root system has become a candidate for stress. Here, a comprehensive, large-scale, single- and multi-omics integration analysis of the metabolome and transcriptome profiles on the leaves of oil palm plants contrasting in terms of FY symptomatology?asymptomatic and symptomatic?and collected in two distinct seasons?dry and rainy?is reported. The changes observed in the physicochemical attributes of the soil and the chemical attributes and metabolome profiles of the leaves did not allow the discrimination of plants which were asymptomatic or symptomatic for this disease, not even in the rainy season, when the soil became waterlogged. However, the multi-omics integration analysis of enzymes and metabolites differentially expressed in asymptomatic and/or symptomatic plants in the rainy season compared to the dry season allowed the identification of the metabolic pathways most affected by the changes in the environment, opening an opportunity for additional characterization of the role of hypoxia in FY symptom intensification. Finally, the initial analysis of a set of 56 proteins/genes differentially expressed in symptomatic plants compared to the asymptomatic ones, independent of the season, has presented pieces of evidence suggesting that breaks in the non-host resistance to non-adapted pathogens and the basal immunity to adapted pathogens, caused by the anaerobic conditions experienced by the plants, might be linked to the onset of this disease. This set of genes might offer the opportunity to develop biomarkers for selecting oil palm plants resistant to this disease and to help pave the way to employing strategies to keep the safety barriers raised and strong.CLEITON BARROSO BITTENCOURT, UNIVERSIDADE FEDERAL DE LAVRAS; THALLITON LUIZ CARVALHO DA SILVA, UNIVERSIDADE FEDERAL DE LAVRAS; JORGE CÂNDIDO RODRIGUES NETO; ANDRE PEREIRA LEAO, CNPAE; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; ALINE DE HOLANDA NUNES MAIA, CNPMA; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; BETANIA FERRAZ QUIRINO, CNPAE; MANOEL TEIXEIRA SOUZA JÚNIOR, UNIVERSIDADE FEDERAL DE LAVRAS.BITTENCOURT, C. B.SILVA, T. L. C. daRODRIGUES NETO, J. C.LEAO, A. P.RIBEIRO, J. A. de A.MAIA, A. de H. N.SOUSA, C. A. F. deQUIRINO, B. F.SOUZA JÚNIOR, M. T.2023-11-16T20:33:44Z2023-11-16T20:33:44Z2023-11-162023info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleInternational Journal of Molecular Sciences, v. 24, n. 16, article 12918, 2023.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1158480https://doi.org/10.3390/ijms241612918enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2023-11-16T20:33:44Zoai:www.alice.cnptia.embrapa.br:doc/1158480Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542023-11-16T20:33:44falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542023-11-16T20:33:44Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
title Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
spellingShingle Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
BITTENCOURT, C. B.
Catalysis
Bud rot
Fatal yellowing
Molecular mechanisms
Elaeis Guineensis
Doença de Planta
Biologia Molecular
Gene Marcador
Palm oils
Plant diseases and disorders
Genetic markers
Hypoxia
Transcriptomics
Metabolomics
spectroscopy
title_short Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
title_full Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
title_fullStr Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
title_full_unstemmed Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
title_sort Molecular interplay between non-host resistance, pathogens and basal immunity as a background for fatal yellowing in oil palm (Elaeis guineensis Jacq.) plants.
author BITTENCOURT, C. B.
author_facet BITTENCOURT, C. B.
SILVA, T. L. C. da
RODRIGUES NETO, J. C.
LEAO, A. P.
RIBEIRO, J. A. de A.
MAIA, A. de H. N.
SOUSA, C. A. F. de
QUIRINO, B. F.
SOUZA JÚNIOR, M. T.
author_role author
author2 SILVA, T. L. C. da
RODRIGUES NETO, J. C.
LEAO, A. P.
RIBEIRO, J. A. de A.
MAIA, A. de H. N.
SOUSA, C. A. F. de
QUIRINO, B. F.
SOUZA JÚNIOR, M. T.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv CLEITON BARROSO BITTENCOURT, UNIVERSIDADE FEDERAL DE LAVRAS; THALLITON LUIZ CARVALHO DA SILVA, UNIVERSIDADE FEDERAL DE LAVRAS; JORGE CÂNDIDO RODRIGUES NETO; ANDRE PEREIRA LEAO, CNPAE; JOSE ANTONIO DE AQUINO RIBEIRO, CNPAE; ALINE DE HOLANDA NUNES MAIA, CNPMA; CARLOS ANTONIO FERREIRA DE SOUSA, CPAMN; BETANIA FERRAZ QUIRINO, CNPAE; MANOEL TEIXEIRA SOUZA JÚNIOR, UNIVERSIDADE FEDERAL DE LAVRAS.
dc.contributor.author.fl_str_mv BITTENCOURT, C. B.
SILVA, T. L. C. da
RODRIGUES NETO, J. C.
LEAO, A. P.
RIBEIRO, J. A. de A.
MAIA, A. de H. N.
SOUSA, C. A. F. de
QUIRINO, B. F.
SOUZA JÚNIOR, M. T.
dc.subject.por.fl_str_mv Catalysis
Bud rot
Fatal yellowing
Molecular mechanisms
Elaeis Guineensis
Doença de Planta
Biologia Molecular
Gene Marcador
Palm oils
Plant diseases and disorders
Genetic markers
Hypoxia
Transcriptomics
Metabolomics
spectroscopy
topic Catalysis
Bud rot
Fatal yellowing
Molecular mechanisms
Elaeis Guineensis
Doença de Planta
Biologia Molecular
Gene Marcador
Palm oils
Plant diseases and disorders
Genetic markers
Hypoxia
Transcriptomics
Metabolomics
spectroscopy
description Abstract: An oil palm (Elaeis guineensis Jacq.) bud rod disorder of unknown etiology, named Fatal Yellowing (FY) disease, is regarded as one of the top constraints with respect to the growth of the palm oil industry in Brazil. FY etiology has been a challenge embraced by several research groups in plant pathology throughout the last 50 years in Brazil, with no success in completing Koch?s postulates. Most recently, the hypothesis of having an abiotic stressor as the initial cause of FY has gained ground, and oxygen deficiency (hypoxia) damaging the root system has become a candidate for stress. Here, a comprehensive, large-scale, single- and multi-omics integration analysis of the metabolome and transcriptome profiles on the leaves of oil palm plants contrasting in terms of FY symptomatology?asymptomatic and symptomatic?and collected in two distinct seasons?dry and rainy?is reported. The changes observed in the physicochemical attributes of the soil and the chemical attributes and metabolome profiles of the leaves did not allow the discrimination of plants which were asymptomatic or symptomatic for this disease, not even in the rainy season, when the soil became waterlogged. However, the multi-omics integration analysis of enzymes and metabolites differentially expressed in asymptomatic and/or symptomatic plants in the rainy season compared to the dry season allowed the identification of the metabolic pathways most affected by the changes in the environment, opening an opportunity for additional characterization of the role of hypoxia in FY symptom intensification. Finally, the initial analysis of a set of 56 proteins/genes differentially expressed in symptomatic plants compared to the asymptomatic ones, independent of the season, has presented pieces of evidence suggesting that breaks in the non-host resistance to non-adapted pathogens and the basal immunity to adapted pathogens, caused by the anaerobic conditions experienced by the plants, might be linked to the onset of this disease. This set of genes might offer the opportunity to develop biomarkers for selecting oil palm plants resistant to this disease and to help pave the way to employing strategies to keep the safety barriers raised and strong.
publishDate 2023
dc.date.none.fl_str_mv 2023-11-16T20:33:44Z
2023-11-16T20:33:44Z
2023-11-16
2023
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv International Journal of Molecular Sciences, v. 24, n. 16, article 12918, 2023.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1158480
https://doi.org/10.3390/ijms241612918
identifier_str_mv International Journal of Molecular Sciences, v. 24, n. 16, article 12918, 2023.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1158480
https://doi.org/10.3390/ijms241612918
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503552006094848