Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.

Detalhes bibliográficos
Autor(a) principal: EVANS, F. F.
Data de Publicação: 2004
Outros Autores: ROSADO, A. S., SEBASTIÁN, G. V., CASELLA, R., MACHADO, P. L. O. de A., HOLMSTRÖM, C., KJELLEBERG, S., ELSAS, J. D. van, SELDIN, L.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135450
https://doi.org/10.1016/j.femsec.2004.04.007
Resumo: The aim of this study was to analyse the effect of oil contamination and biostimulation (soil pH raise, and nitrogen, phosphate and sulphur addition) on the diversity of a bacterial community of an acidic Cambisol under Atlantic Forest. The experiment was based on the enumeration of bacterial populations and hydrocarbon degraders in microcosms through the use of conventional plating techniques and molecular fingerprinting of samples directly from the environment. PCR followed by denaturing gradient gel electrophoresis (DGGE) was used to generate microbial community fingerprints employing 16S rRNA gene as molecular marker. Biostimulation led to increases of soil pH (to 7.0) and of the levels of phosphorus and K, Ca, and Mg. Oil contamination caused an increase in soil organic carbon (170-190% higher than control soil). Total bacterial counts were stable throughout the experiment, while MPN counts of hydrocarbon degraders showed an increase in the biostimulated and oil-contaminated soil samples. Molecular fingerprinting performed with 16S rRNA gene PCR and DGGE analysis revealed stable patterns along the 360 days of experiment, showing little change in oil-contaminated microcosms after 90 days. The DGGE patterns of the biostimulated samples showed severe changes due to decreases in the number of bands as compared to the control samples as from 15 days after addition of nutrients to the soil. Results obtained in the present study indicate that the addition of inorganic compounds to soil in conjunction with oil contamination has a greater impact on the bacterial community than oil contamination only.
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spelling Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.Atlantic forestBacterial diversityBiostimulationCrude oilDGGE16S rRNA geneSoil microcosmsCambisolsThe aim of this study was to analyse the effect of oil contamination and biostimulation (soil pH raise, and nitrogen, phosphate and sulphur addition) on the diversity of a bacterial community of an acidic Cambisol under Atlantic Forest. The experiment was based on the enumeration of bacterial populations and hydrocarbon degraders in microcosms through the use of conventional plating techniques and molecular fingerprinting of samples directly from the environment. PCR followed by denaturing gradient gel electrophoresis (DGGE) was used to generate microbial community fingerprints employing 16S rRNA gene as molecular marker. Biostimulation led to increases of soil pH (to 7.0) and of the levels of phosphorus and K, Ca, and Mg. Oil contamination caused an increase in soil organic carbon (170-190% higher than control soil). Total bacterial counts were stable throughout the experiment, while MPN counts of hydrocarbon degraders showed an increase in the biostimulated and oil-contaminated soil samples. Molecular fingerprinting performed with 16S rRNA gene PCR and DGGE analysis revealed stable patterns along the 360 days of experiment, showing little change in oil-contaminated microcosms after 90 days. The DGGE patterns of the biostimulated samples showed severe changes due to decreases in the number of bands as compared to the control samples as from 15 days after addition of nutrients to the soil. Results obtained in the present study indicate that the addition of inorganic compounds to soil in conjunction with oil contamination has a greater impact on the bacterial community than oil contamination only.Na publicação: Pedro L. O. A. Machado.FLAVIA F. EVANS, UFRJ; ALEXANDRE S. ROSADO, UFRJ; GINA V. SEBASTIÁN, CENPES/PETROBRAS; RENATA CASELLA, CENPES/PETROBRAS; PEDRO LUIZ OLIVEIRA DE A MACHADO, CNPS; CAROLA HOLMSTRÖM, UNIVERSITY OF NEW SOUTH WALES; STAFFAN KJELLEBERG, UNIVERSITY OF NEW SOUTH WALES; JAN D. VAN ELSAS, GRONINGEN UNIVERSITY; LUCY SELDIN, UFRJ.EVANS, F. F.ROSADO, A. S.SEBASTIÁN, G. V.CASELLA, R.MACHADO, P. L. O. de A.HOLMSTRÖM, C.KJELLEBERG, S.ELSAS, J. D. vanSELDIN, L.2021-10-20T02:11:34Z2021-10-20T02:11:34Z2021-10-192004info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleFEMS Microbiology Ecology, v. 49, n. 2, p. 295-305, Aug. 2004.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135450https://doi.org/10.1016/j.femsec.2004.04.007enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-10-20T02:11:42Zoai:www.alice.cnptia.embrapa.br:doc/1135450Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-10-20T02:11:42falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-10-20T02:11:42Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
title Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
spellingShingle Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
EVANS, F. F.
Atlantic forest
Bacterial diversity
Biostimulation
Crude oil
DGGE
16S rRNA gene
Soil microcosms
Cambisols
title_short Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
title_full Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
title_fullStr Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
title_full_unstemmed Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
title_sort Impact of oil contamination and biostimulation on the diversity of indigenous bacterial communities in soil microcosms.
author EVANS, F. F.
author_facet EVANS, F. F.
ROSADO, A. S.
SEBASTIÁN, G. V.
CASELLA, R.
MACHADO, P. L. O. de A.
HOLMSTRÖM, C.
KJELLEBERG, S.
ELSAS, J. D. van
SELDIN, L.
author_role author
author2 ROSADO, A. S.
SEBASTIÁN, G. V.
CASELLA, R.
MACHADO, P. L. O. de A.
HOLMSTRÖM, C.
KJELLEBERG, S.
ELSAS, J. D. van
SELDIN, L.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv FLAVIA F. EVANS, UFRJ; ALEXANDRE S. ROSADO, UFRJ; GINA V. SEBASTIÁN, CENPES/PETROBRAS; RENATA CASELLA, CENPES/PETROBRAS; PEDRO LUIZ OLIVEIRA DE A MACHADO, CNPS; CAROLA HOLMSTRÖM, UNIVERSITY OF NEW SOUTH WALES; STAFFAN KJELLEBERG, UNIVERSITY OF NEW SOUTH WALES; JAN D. VAN ELSAS, GRONINGEN UNIVERSITY; LUCY SELDIN, UFRJ.
dc.contributor.author.fl_str_mv EVANS, F. F.
ROSADO, A. S.
SEBASTIÁN, G. V.
CASELLA, R.
MACHADO, P. L. O. de A.
HOLMSTRÖM, C.
KJELLEBERG, S.
ELSAS, J. D. van
SELDIN, L.
dc.subject.por.fl_str_mv Atlantic forest
Bacterial diversity
Biostimulation
Crude oil
DGGE
16S rRNA gene
Soil microcosms
Cambisols
topic Atlantic forest
Bacterial diversity
Biostimulation
Crude oil
DGGE
16S rRNA gene
Soil microcosms
Cambisols
description The aim of this study was to analyse the effect of oil contamination and biostimulation (soil pH raise, and nitrogen, phosphate and sulphur addition) on the diversity of a bacterial community of an acidic Cambisol under Atlantic Forest. The experiment was based on the enumeration of bacterial populations and hydrocarbon degraders in microcosms through the use of conventional plating techniques and molecular fingerprinting of samples directly from the environment. PCR followed by denaturing gradient gel electrophoresis (DGGE) was used to generate microbial community fingerprints employing 16S rRNA gene as molecular marker. Biostimulation led to increases of soil pH (to 7.0) and of the levels of phosphorus and K, Ca, and Mg. Oil contamination caused an increase in soil organic carbon (170-190% higher than control soil). Total bacterial counts were stable throughout the experiment, while MPN counts of hydrocarbon degraders showed an increase in the biostimulated and oil-contaminated soil samples. Molecular fingerprinting performed with 16S rRNA gene PCR and DGGE analysis revealed stable patterns along the 360 days of experiment, showing little change in oil-contaminated microcosms after 90 days. The DGGE patterns of the biostimulated samples showed severe changes due to decreases in the number of bands as compared to the control samples as from 15 days after addition of nutrients to the soil. Results obtained in the present study indicate that the addition of inorganic compounds to soil in conjunction with oil contamination has a greater impact on the bacterial community than oil contamination only.
publishDate 2004
dc.date.none.fl_str_mv 2004
2021-10-20T02:11:34Z
2021-10-20T02:11:34Z
2021-10-19
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv FEMS Microbiology Ecology, v. 49, n. 2, p. 295-305, Aug. 2004.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135450
https://doi.org/10.1016/j.femsec.2004.04.007
identifier_str_mv FEMS Microbiology Ecology, v. 49, n. 2, p. 295-305, Aug. 2004.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1135450
https://doi.org/10.1016/j.femsec.2004.04.007
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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