The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.

Detalhes bibliográficos
Autor(a) principal: BERNARDINO, K. C.
Data de Publicação: 2019
Outros Autores: PASTINA, M. M., MENEZES, C. B. de, SOUSA, S. M. de, MACIEL, L. S., CARVALHO JÚNIOR, G., GUIMARÃES, C. T., BARROS, B. de A., SILVA, L. da C. e, CARNEIRO, P. C. S., SCHAFFERT, R. E., KOCHIAN, L. V., MAGALHAES, J. V. de
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1106657
Resumo: Background: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P availability for crops cultivated on highly weathered tropical soils, which are common in developing countries. Hence, P deficiency becomes a major obstacle for global food security. We used multi-trait quantitative trait loci (QTL) mapping to study the genetic architecture of P efficiency and to explore the importance of root traits on sorghum grain yield on a tropical low-P soil. Results: P acquisition efficiency was the most important component of P efficiency, and both traits were highly correlated with grain yield under low P availability. Root surface area was positively associated with grain yield. The guinea parent, SC283, contributed 58% of all favorable alleles detected by single-trait mapping. Multi-trait mapping detected 14 grain yield and/or root morphology QTLs. Tightly linked or pleiotropic QTL underlying the surface area of fine roots (1?2?mm in diameter) and grain yield were detected at positions 1?7 megabase pairs (Mb) and 71?Mb on chromosome 3, respectively, and a root diameter/grain yield QTL was detected at 7?Mb on chromosome 7. All these QTLs were near sorghum homologs of the rice serine/threonine kinase, OsPSTOL1. The SbPSTOL1 genes on chromosome 3, Sb03g006765 at 7?Mb and Sb03g031690 at 60?Mb were more highly expressed in SC283, which donated the favorable alleles at all QTLs found nearby SbPSTOL1 genes. The Al tolerance gene, SbMATE, may also influence a grain yield QTL on chromosome 3. Another PSTOL1-like gene, Sb07g02840, appears to enhance grain yield via small increases in root diameter. Co-localization analyses suggested a role for other genes, such as a sorghum homolog of the Arabidopsis ubiquitin-conjugating E2 enzyme, phosphate 2 (PHO2), on grain yield advantage conferred by the elite parent, BR007 allele. Conclusions: Genetic determinants conferring higher root surface area and slight increases in fine root diameter may favor P uptake, thereby enhancing grain yield under low-P availability in the soil. Molecular markers for SbPSTOL1 genes and for QTL increasing grain yield by non-root morphology-based mechanisms hold promise in breeding strategies aimed at developing sorghum cultivars adapted to low-P soils.
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spelling The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.FósforoDeficiênciaSolo ÁcidoRaizSorgoBackground: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P availability for crops cultivated on highly weathered tropical soils, which are common in developing countries. Hence, P deficiency becomes a major obstacle for global food security. We used multi-trait quantitative trait loci (QTL) mapping to study the genetic architecture of P efficiency and to explore the importance of root traits on sorghum grain yield on a tropical low-P soil. Results: P acquisition efficiency was the most important component of P efficiency, and both traits were highly correlated with grain yield under low P availability. Root surface area was positively associated with grain yield. The guinea parent, SC283, contributed 58% of all favorable alleles detected by single-trait mapping. Multi-trait mapping detected 14 grain yield and/or root morphology QTLs. Tightly linked or pleiotropic QTL underlying the surface area of fine roots (1?2?mm in diameter) and grain yield were detected at positions 1?7 megabase pairs (Mb) and 71?Mb on chromosome 3, respectively, and a root diameter/grain yield QTL was detected at 7?Mb on chromosome 7. All these QTLs were near sorghum homologs of the rice serine/threonine kinase, OsPSTOL1. The SbPSTOL1 genes on chromosome 3, Sb03g006765 at 7?Mb and Sb03g031690 at 60?Mb were more highly expressed in SC283, which donated the favorable alleles at all QTLs found nearby SbPSTOL1 genes. The Al tolerance gene, SbMATE, may also influence a grain yield QTL on chromosome 3. Another PSTOL1-like gene, Sb07g02840, appears to enhance grain yield via small increases in root diameter. Co-localization analyses suggested a role for other genes, such as a sorghum homolog of the Arabidopsis ubiquitin-conjugating E2 enzyme, phosphate 2 (PHO2), on grain yield advantage conferred by the elite parent, BR007 allele. Conclusions: Genetic determinants conferring higher root surface area and slight increases in fine root diameter may favor P uptake, thereby enhancing grain yield under low-P availability in the soil. Molecular markers for SbPSTOL1 genes and for QTL increasing grain yield by non-root morphology-based mechanisms hold promise in breeding strategies aimed at developing sorghum cultivars adapted to low-P soils.Karine C. Bernardino, Universidade Federal de Minas Gerais; MARIA MARTA PASTINA, CNPMS; CICERO BESERRA DE MENEZES, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; Laiane S. Maciel, Universidade Federal de Minas Gerais; Geraldo Carvalho Júnior; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; Luciano da Costa e Silva; Pedro C. S. Carneiro; ROBERT EUGENE SCHAFFERT, CNPMS; Leon V. Kochian; JURANDIR VIEIRA DE MAGALHAES, CNPMS.BERNARDINO, K. C.PASTINA, M. M.MENEZES, C. B. deSOUSA, S. M. deMACIEL, L. S.CARVALHO JÚNIOR, G.GUIMARÃES, C. T.BARROS, B. de A.SILVA, L. da C. eCARNEIRO, P. C. S.SCHAFFERT, R. E.KOCHIAN, L. V.MAGALHAES, J. V. de2019-03-08T00:34:34Z2019-03-08T00:34:34Z2019-03-0120192020-01-24T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Plant Biology, v. 19, n. 87, p. 1-15, 2019.http://www.alice.cnptia.embrapa.br/alice/handle/doc/110665710.1186/s12870-019-1689-yenginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2019-03-08T00:34:42Zoai:www.alice.cnptia.embrapa.br:doc/1106657Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542019-03-08T00:34:42falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542019-03-08T00:34:42Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
title The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
spellingShingle The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
BERNARDINO, K. C.
Fósforo
Deficiência
Solo Ácido
Raiz
Sorgo
title_short The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
title_full The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
title_fullStr The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
title_full_unstemmed The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
title_sort The genetic architecture of phosphorus efficiency in sorghum involves pleiotropic QTL for root morphology and grain yield under low phosphorus availability in the soil.
author BERNARDINO, K. C.
author_facet BERNARDINO, K. C.
PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de
author_role author
author2 PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Karine C. Bernardino, Universidade Federal de Minas Gerais; MARIA MARTA PASTINA, CNPMS; CICERO BESERRA DE MENEZES, CNPMS; SYLVIA MORAIS DE SOUSA TINOCO, CNPMS; Laiane S. Maciel, Universidade Federal de Minas Gerais; Geraldo Carvalho Júnior; CLAUDIA TEIXEIRA GUIMARAES, CNPMS; BEATRIZ DE ALMEIDA BARROS, CNPMS; Luciano da Costa e Silva; Pedro C. S. Carneiro; ROBERT EUGENE SCHAFFERT, CNPMS; Leon V. Kochian; JURANDIR VIEIRA DE MAGALHAES, CNPMS.
dc.contributor.author.fl_str_mv BERNARDINO, K. C.
PASTINA, M. M.
MENEZES, C. B. de
SOUSA, S. M. de
MACIEL, L. S.
CARVALHO JÚNIOR, G.
GUIMARÃES, C. T.
BARROS, B. de A.
SILVA, L. da C. e
CARNEIRO, P. C. S.
SCHAFFERT, R. E.
KOCHIAN, L. V.
MAGALHAES, J. V. de
dc.subject.por.fl_str_mv Fósforo
Deficiência
Solo Ácido
Raiz
Sorgo
topic Fósforo
Deficiência
Solo Ácido
Raiz
Sorgo
description Background: Phosphorus (P) fixation on aluminum (Al) and iron (Fe) oxides in soil clays restricts P availability for crops cultivated on highly weathered tropical soils, which are common in developing countries. Hence, P deficiency becomes a major obstacle for global food security. We used multi-trait quantitative trait loci (QTL) mapping to study the genetic architecture of P efficiency and to explore the importance of root traits on sorghum grain yield on a tropical low-P soil. Results: P acquisition efficiency was the most important component of P efficiency, and both traits were highly correlated with grain yield under low P availability. Root surface area was positively associated with grain yield. The guinea parent, SC283, contributed 58% of all favorable alleles detected by single-trait mapping. Multi-trait mapping detected 14 grain yield and/or root morphology QTLs. Tightly linked or pleiotropic QTL underlying the surface area of fine roots (1?2?mm in diameter) and grain yield were detected at positions 1?7 megabase pairs (Mb) and 71?Mb on chromosome 3, respectively, and a root diameter/grain yield QTL was detected at 7?Mb on chromosome 7. All these QTLs were near sorghum homologs of the rice serine/threonine kinase, OsPSTOL1. The SbPSTOL1 genes on chromosome 3, Sb03g006765 at 7?Mb and Sb03g031690 at 60?Mb were more highly expressed in SC283, which donated the favorable alleles at all QTLs found nearby SbPSTOL1 genes. The Al tolerance gene, SbMATE, may also influence a grain yield QTL on chromosome 3. Another PSTOL1-like gene, Sb07g02840, appears to enhance grain yield via small increases in root diameter. Co-localization analyses suggested a role for other genes, such as a sorghum homolog of the Arabidopsis ubiquitin-conjugating E2 enzyme, phosphate 2 (PHO2), on grain yield advantage conferred by the elite parent, BR007 allele. Conclusions: Genetic determinants conferring higher root surface area and slight increases in fine root diameter may favor P uptake, thereby enhancing grain yield under low-P availability in the soil. Molecular markers for SbPSTOL1 genes and for QTL increasing grain yield by non-root morphology-based mechanisms hold promise in breeding strategies aimed at developing sorghum cultivars adapted to low-P soils.
publishDate 2019
dc.date.none.fl_str_mv 2019-03-08T00:34:34Z
2019-03-08T00:34:34Z
2019-03-01
2019
2020-01-24T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BMC Plant Biology, v. 19, n. 87, p. 1-15, 2019.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1106657
10.1186/s12870-019-1689-y
identifier_str_mv BMC Plant Biology, v. 19, n. 87, p. 1-15, 2019.
10.1186/s12870-019-1689-y
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1106657
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
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repository.mail.fl_str_mv cg-riaa@embrapa.br
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