Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.

Detalhes bibliográficos
Autor(a) principal: TORRES, A. R.
Data de Publicação: 2015
Outros Autores: GRUNVALD, A. K., MARTINS, T. B., SANTOS, M. A. dos, LEMOS, N. G., SILVA, L. A. S., HUNGRIA, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1011684
Resumo: Biological nitrogen fixation (BNF) has global economic and environmental importance, but has often not been considered in soybean [Glycine max (L.) Merrill] breeding programs. Knowing the genetic diversity and structure of a population within a germoplasm represent a key step for breeding programs. This study aimed at determining the structure of the population and diversity of soybean with regard to BNF and protein content in grain. In total, 191 accessions were evaluated, including 171 commercial soybean cultivars, developed and released by public institutions and private companies in Brazil, and 20 ancestral lines. The genotypes were chosen to represent four genetic groups: 128 Brazilian public genotypes, 20 exotic, and 43 genotypes from private companies. Soybeans were genotyped with 22 SSR markers, previously described as associated with BNF and protein content. Genetic diversity was evaluated using the DARwin 5.0 software. Population structure was inferred by principal component analysis and by the STRUCTURE software. The accessions were distributed in two groups: one clustering approximately 50 % of the accessions, from Brazilian public and private companies; the other one clustering 45 % of the accessions, including Brazilian, exotic and private germoplasms. Some accessions (5 %) were not grouped in any cluster. Principal component analysis explained 29 % of the total variance and there was a tendency to cluster the accessions into two groups. Similar results were obtained with the STRUCTURE, clearly showing two subpopulations. There is variability for BNF and protein content amongst both modern germoplasms cultivated in Brazil and ancestral lines. This variability could be better explored in soybean breeding programs to improve these traits.
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spelling Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.SojaFixação de nitrogênioSoybeansNitrogen fixationBiological nitrogen fixation (BNF) has global economic and environmental importance, but has often not been considered in soybean [Glycine max (L.) Merrill] breeding programs. Knowing the genetic diversity and structure of a population within a germoplasm represent a key step for breeding programs. This study aimed at determining the structure of the population and diversity of soybean with regard to BNF and protein content in grain. In total, 191 accessions were evaluated, including 171 commercial soybean cultivars, developed and released by public institutions and private companies in Brazil, and 20 ancestral lines. The genotypes were chosen to represent four genetic groups: 128 Brazilian public genotypes, 20 exotic, and 43 genotypes from private companies. Soybeans were genotyped with 22 SSR markers, previously described as associated with BNF and protein content. Genetic diversity was evaluated using the DARwin 5.0 software. Population structure was inferred by principal component analysis and by the STRUCTURE software. The accessions were distributed in two groups: one clustering approximately 50 % of the accessions, from Brazilian public and private companies; the other one clustering 45 % of the accessions, including Brazilian, exotic and private germoplasms. Some accessions (5 %) were not grouped in any cluster. Principal component analysis explained 29 % of the total variance and there was a tendency to cluster the accessions into two groups. Similar results were obtained with the STRUCTURE, clearly showing two subpopulations. There is variability for BNF and protein content amongst both modern germoplasms cultivated in Brazil and ancestral lines. This variability could be better explored in soybean breeding programs to improve these traits.ADALGISA RIBEIRO TORRES; ANNA KAROLINA GRUNVALD; TALITA BUSULINI MARTINS; MARIA APARECIDA DOS SANTOS, PIONEER; NOÉLLE GIACOMINI LEMOS, MONSATO; LUIS ANTONIO STABILE SILVA, PIONEER; MARIANGELA HUNGRIA DA CUNHA, CNPSO.TORRES, A. R.GRUNVALD, A. K.MARTINS, T. B.SANTOS, M. A. dosLEMOS, N. G.SILVA, L. A. S.HUNGRIA, M.2015-03-18T11:11:11Z2015-03-18T11:11:11Z2015-03-1820152016-02-23T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleScientia Agricola, Piracicaba, v. 72, n. 1, p. 47-52, Jan./Feb. 2015.0103-9016http://www.alice.cnptia.embrapa.br/alice/handle/doc/1011684enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T02:12:48Zoai:www.alice.cnptia.embrapa.br:doc/1011684Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T02:12:48falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T02:12:48Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
title Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
spellingShingle Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
TORRES, A. R.
Soja
Fixação de nitrogênio
Soybeans
Nitrogen fixation
title_short Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
title_full Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
title_fullStr Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
title_full_unstemmed Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
title_sort Genetic structure and diversity of a soybean germplasm considering biological nitrogen fixation and protein content.
author TORRES, A. R.
author_facet TORRES, A. R.
GRUNVALD, A. K.
MARTINS, T. B.
SANTOS, M. A. dos
LEMOS, N. G.
SILVA, L. A. S.
HUNGRIA, M.
author_role author
author2 GRUNVALD, A. K.
MARTINS, T. B.
SANTOS, M. A. dos
LEMOS, N. G.
SILVA, L. A. S.
HUNGRIA, M.
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv ADALGISA RIBEIRO TORRES; ANNA KAROLINA GRUNVALD; TALITA BUSULINI MARTINS; MARIA APARECIDA DOS SANTOS, PIONEER; NOÉLLE GIACOMINI LEMOS, MONSATO; LUIS ANTONIO STABILE SILVA, PIONEER; MARIANGELA HUNGRIA DA CUNHA, CNPSO.
dc.contributor.author.fl_str_mv TORRES, A. R.
GRUNVALD, A. K.
MARTINS, T. B.
SANTOS, M. A. dos
LEMOS, N. G.
SILVA, L. A. S.
HUNGRIA, M.
dc.subject.por.fl_str_mv Soja
Fixação de nitrogênio
Soybeans
Nitrogen fixation
topic Soja
Fixação de nitrogênio
Soybeans
Nitrogen fixation
description Biological nitrogen fixation (BNF) has global economic and environmental importance, but has often not been considered in soybean [Glycine max (L.) Merrill] breeding programs. Knowing the genetic diversity and structure of a population within a germoplasm represent a key step for breeding programs. This study aimed at determining the structure of the population and diversity of soybean with regard to BNF and protein content in grain. In total, 191 accessions were evaluated, including 171 commercial soybean cultivars, developed and released by public institutions and private companies in Brazil, and 20 ancestral lines. The genotypes were chosen to represent four genetic groups: 128 Brazilian public genotypes, 20 exotic, and 43 genotypes from private companies. Soybeans were genotyped with 22 SSR markers, previously described as associated with BNF and protein content. Genetic diversity was evaluated using the DARwin 5.0 software. Population structure was inferred by principal component analysis and by the STRUCTURE software. The accessions were distributed in two groups: one clustering approximately 50 % of the accessions, from Brazilian public and private companies; the other one clustering 45 % of the accessions, including Brazilian, exotic and private germoplasms. Some accessions (5 %) were not grouped in any cluster. Principal component analysis explained 29 % of the total variance and there was a tendency to cluster the accessions into two groups. Similar results were obtained with the STRUCTURE, clearly showing two subpopulations. There is variability for BNF and protein content amongst both modern germoplasms cultivated in Brazil and ancestral lines. This variability could be better explored in soybean breeding programs to improve these traits.
publishDate 2015
dc.date.none.fl_str_mv 2015-03-18T11:11:11Z
2015-03-18T11:11:11Z
2015-03-18
2015
2016-02-23T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Scientia Agricola, Piracicaba, v. 72, n. 1, p. 47-52, Jan./Feb. 2015.
0103-9016
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1011684
identifier_str_mv Scientia Agricola, Piracicaba, v. 72, n. 1, p. 47-52, Jan./Feb. 2015.
0103-9016
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1011684
dc.language.iso.fl_str_mv eng
language eng
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instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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