Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.

Detalhes bibliográficos
Autor(a) principal: PEIXOTO, M. G. C. D.
Data de Publicação: 2021
Outros Autores: CARVALHO, M. R. S., EGITO, A. A. do, STEINBERG, R. S., BRUNELI, F. A. T., MACHADO, M. A., SANTOS, F. C., ROSSE, I. C., FONSECA, P. A. S.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133527
https:// doi.org/10.3390/ani11041125
Resumo: The Brazilian Guzerá population originated from a few founders introduced from India. These animals adapted well to the harsh environments in Brazil, were selected for beef, milk, or dual-purpose (beef and milk), and were extensively used to produce crossbred animals. Here, the impact of these historical events with regard to the population structure and genetic diversity in a Guzerá meta-population was evaluated. DNA samples of 744 animals (one dairy, nine dual-purpose, and five beef herds) were genotyped for 21 microsatellite loci. Ho, He, PIC, Fis, Fit, and Fst estimates were obtained considering either farms or lineages as subpopulations. Mean Ho (0.73) and PIC (0.75) suggest that genetic diversity was efficiently conserved. Fit, Fis and Fst values (95% CI) pointed to a low fixation index, and large genetic diversity: Fit (Farms = 0.021?0.100; lineages = 0.021?0.100), Fis (Farms = ?0.007?0.076; lineages = ��0.014?0.070), and Fst (Farms = 0.0237?0.032; lineages = 0.029? 0.038). The dual-purpose herds/selection lines are the most uniform subpopulation, while the beef one preserved larger amounts of genetic diversity among herds. In addition, the dairy herd showed to be genetically distant from other herds. Taken together, these results suggest that this Guzerá meta-population has high genetic diversity, a low degree of population subdivision, and a low inbreeding level.
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spelling Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.Seleção artificialDiversidade genéticaEstrutura genéticaLivestock conservationGenetic variabilitySustainable managementBovinoGado ZebuVariação GenéticaArtificial selectionThe Brazilian Guzerá population originated from a few founders introduced from India. These animals adapted well to the harsh environments in Brazil, were selected for beef, milk, or dual-purpose (beef and milk), and were extensively used to produce crossbred animals. Here, the impact of these historical events with regard to the population structure and genetic diversity in a Guzerá meta-population was evaluated. DNA samples of 744 animals (one dairy, nine dual-purpose, and five beef herds) were genotyped for 21 microsatellite loci. Ho, He, PIC, Fis, Fit, and Fst estimates were obtained considering either farms or lineages as subpopulations. Mean Ho (0.73) and PIC (0.75) suggest that genetic diversity was efficiently conserved. Fit, Fis and Fst values (95% CI) pointed to a low fixation index, and large genetic diversity: Fit (Farms = 0.021?0.100; lineages = 0.021?0.100), Fis (Farms = ?0.007?0.076; lineages = ��0.014?0.070), and Fst (Farms = 0.0237?0.032; lineages = 0.029? 0.038). The dual-purpose herds/selection lines are the most uniform subpopulation, while the beef one preserved larger amounts of genetic diversity among herds. In addition, the dairy herd showed to be genetically distant from other herds. Taken together, these results suggest that this Guzerá meta-population has high genetic diversity, a low degree of population subdivision, and a low inbreeding level.MARIA GABRIELA CAMPOLINA D PEIXOTO, CNPGL; MARIA RAQUEL S. CARVALHO, Universidade Federal de Minas Gerais; ANDREA ALVES DO EGITO, CNPGC; RAPHAEL S. STEINBERG, Universidade Federal de Minas Gerais; FRANK ANGELO TOMITA BRUNELI, CNPGL; MARCO ANTONIO MACHADO, CNPGL; FERNANDA C. SANTOS, Universidade Federal de Minas Gerais; IZINARA C. ROSSE, Universidade Federal de Ouro Preto; PABLO AUGUSTO S. FONSECA, University of Guelph.PEIXOTO, M. G. C. D.CARVALHO, M. R. S.EGITO, A. A. doSTEINBERG, R. S.BRUNELI, F. A. T.MACHADO, M. A.SANTOS, F. C.ROSSE, I. C.FONSECA, P. A. S.2021-08-13T14:00:24Z2021-08-13T14:00:24Z2021-08-132021info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleAnimals, v. 11, 1125, 2021.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133527https:// doi.org/10.3390/ani11041125enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2021-08-13T14:00:33Zoai:www.alice.cnptia.embrapa.br:doc/1133527Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542021-08-13T14:00:33falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542021-08-13T14:00:33Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
title Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
spellingShingle Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
PEIXOTO, M. G. C. D.
Seleção artificial
Diversidade genética
Estrutura genética
Livestock conservation
Genetic variability
Sustainable management
Bovino
Gado Zebu
Variação Genética
Artificial selection
title_short Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
title_full Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
title_fullStr Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
title_full_unstemmed Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
title_sort Genetic diversity and population genetic structure of a Guzerá (Bos indicus) meta-population.
author PEIXOTO, M. G. C. D.
author_facet PEIXOTO, M. G. C. D.
CARVALHO, M. R. S.
EGITO, A. A. do
STEINBERG, R. S.
BRUNELI, F. A. T.
MACHADO, M. A.
SANTOS, F. C.
ROSSE, I. C.
FONSECA, P. A. S.
author_role author
author2 CARVALHO, M. R. S.
EGITO, A. A. do
STEINBERG, R. S.
BRUNELI, F. A. T.
MACHADO, M. A.
SANTOS, F. C.
ROSSE, I. C.
FONSECA, P. A. S.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv MARIA GABRIELA CAMPOLINA D PEIXOTO, CNPGL; MARIA RAQUEL S. CARVALHO, Universidade Federal de Minas Gerais; ANDREA ALVES DO EGITO, CNPGC; RAPHAEL S. STEINBERG, Universidade Federal de Minas Gerais; FRANK ANGELO TOMITA BRUNELI, CNPGL; MARCO ANTONIO MACHADO, CNPGL; FERNANDA C. SANTOS, Universidade Federal de Minas Gerais; IZINARA C. ROSSE, Universidade Federal de Ouro Preto; PABLO AUGUSTO S. FONSECA, University of Guelph.
dc.contributor.author.fl_str_mv PEIXOTO, M. G. C. D.
CARVALHO, M. R. S.
EGITO, A. A. do
STEINBERG, R. S.
BRUNELI, F. A. T.
MACHADO, M. A.
SANTOS, F. C.
ROSSE, I. C.
FONSECA, P. A. S.
dc.subject.por.fl_str_mv Seleção artificial
Diversidade genética
Estrutura genética
Livestock conservation
Genetic variability
Sustainable management
Bovino
Gado Zebu
Variação Genética
Artificial selection
topic Seleção artificial
Diversidade genética
Estrutura genética
Livestock conservation
Genetic variability
Sustainable management
Bovino
Gado Zebu
Variação Genética
Artificial selection
description The Brazilian Guzerá population originated from a few founders introduced from India. These animals adapted well to the harsh environments in Brazil, were selected for beef, milk, or dual-purpose (beef and milk), and were extensively used to produce crossbred animals. Here, the impact of these historical events with regard to the population structure and genetic diversity in a Guzerá meta-population was evaluated. DNA samples of 744 animals (one dairy, nine dual-purpose, and five beef herds) were genotyped for 21 microsatellite loci. Ho, He, PIC, Fis, Fit, and Fst estimates were obtained considering either farms or lineages as subpopulations. Mean Ho (0.73) and PIC (0.75) suggest that genetic diversity was efficiently conserved. Fit, Fis and Fst values (95% CI) pointed to a low fixation index, and large genetic diversity: Fit (Farms = 0.021?0.100; lineages = 0.021?0.100), Fis (Farms = ?0.007?0.076; lineages = ��0.014?0.070), and Fst (Farms = 0.0237?0.032; lineages = 0.029? 0.038). The dual-purpose herds/selection lines are the most uniform subpopulation, while the beef one preserved larger amounts of genetic diversity among herds. In addition, the dairy herd showed to be genetically distant from other herds. Taken together, these results suggest that this Guzerá meta-population has high genetic diversity, a low degree of population subdivision, and a low inbreeding level.
publishDate 2021
dc.date.none.fl_str_mv 2021-08-13T14:00:24Z
2021-08-13T14:00:24Z
2021-08-13
2021
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Animals, v. 11, 1125, 2021.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133527
https:// doi.org/10.3390/ani11041125
identifier_str_mv Animals, v. 11, 1125, 2021.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1133527
https:// doi.org/10.3390/ani11041125
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
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