Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.

Detalhes bibliográficos
Autor(a) principal: ALVES, M. F.
Data de Publicação: 2016
Outros Autores: NIZIO, D. A. C., BRITO, F. A., SAMPAIO, T. S., MUNIZ, A. V. C. da S., ARRIGONI BLANK, M. F., CARVALHO, S. V. A., BLANK, A. F.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1061458
Resumo: Myrcia lundiana Kiaersk. is a tree of the family Myrtaceae found in tropical and subtropical areas of the southern hemisphere that produces essential oil. The aim of this study was to characterize the genetic diversity of M. lundiana plants from a native population of Parque Nacional de Itabaiana, using inter-simple sequence repeat molecular markers. Thirty-five primers were tested, 20 of which were polymorphic, resulting in 135 polymorphic and informative bands. Results of the cluster analysis, obtained using the unweighted pair group method with arithmetic mean, grouped plants into three clusters: Cluster I - MLU001, MLU002, MLU003, MLU004, MLU005, MLU006, MLU018, MLU019, LU020, MLU021, LU022; MLU008, MLU011, MLU012, MLU014, MLU015, MLU017, MLU026, and MLU028; Cluster II - MLU007, MLU009, MLU010, MLU013, and MLU016; and Cluster III - MLU023, MLU024, MLU025, and MLU027. Jaccard similarity coefficients for pair-wise comparisons of plants ranged between 0.15 and 0.87. MLU014 and MLU015 presented low genetic diversity, with a similarity index of 0.87. Conversely, MLU007 and MLU019 presented high diversity, with a similarity index of 0.15. According to the structure analysis, three distinct clusters were formed. Genetic diversity of M. lundiana plants was intermediate, and expansion of its genetic diversity is necessary. MLU026 and MLU028 are the most suitable for selection in breeding programs, since they clearly represent all of the diversity present in these plants. Moreover, these results provide important information on the existing genetic variability, highlighting the importance of Parque Nacional de Itabaiana for the conservation of this species.
id EMBR_51af0889821ff7252b9dee7e6dd6ad7d
oai_identifier_str oai:www.alice.cnptia.embrapa.br:doc/1061458
network_acronym_str EMBR
network_name_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository_id_str 2154
spelling Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.Canela-de-tabuleiroPlanta medicinalGenéticaMyrcia lundiana Kiaersk. is a tree of the family Myrtaceae found in tropical and subtropical areas of the southern hemisphere that produces essential oil. The aim of this study was to characterize the genetic diversity of M. lundiana plants from a native population of Parque Nacional de Itabaiana, using inter-simple sequence repeat molecular markers. Thirty-five primers were tested, 20 of which were polymorphic, resulting in 135 polymorphic and informative bands. Results of the cluster analysis, obtained using the unweighted pair group method with arithmetic mean, grouped plants into three clusters: Cluster I - MLU001, MLU002, MLU003, MLU004, MLU005, MLU006, MLU018, MLU019, LU020, MLU021, LU022; MLU008, MLU011, MLU012, MLU014, MLU015, MLU017, MLU026, and MLU028; Cluster II - MLU007, MLU009, MLU010, MLU013, and MLU016; and Cluster III - MLU023, MLU024, MLU025, and MLU027. Jaccard similarity coefficients for pair-wise comparisons of plants ranged between 0.15 and 0.87. MLU014 and MLU015 presented low genetic diversity, with a similarity index of 0.87. Conversely, MLU007 and MLU019 presented high diversity, with a similarity index of 0.15. According to the structure analysis, three distinct clusters were formed. Genetic diversity of M. lundiana plants was intermediate, and expansion of its genetic diversity is necessary. MLU026 and MLU028 are the most suitable for selection in breeding programs, since they clearly represent all of the diversity present in these plants. Moreover, these results provide important information on the existing genetic variability, highlighting the importance of Parque Nacional de Itabaiana for the conservation of this species.ANA VERUSKA CRUZ DA SILVA MUNIZ, CPATC.ALVES, M. F.NIZIO, D. A. C.BRITO, F. A.SAMPAIO, T. S.MUNIZ, A. V. C. da S.ARRIGONI BLANK, M. F.CARVALHO, S. V. A.BLANK, A. F.2017-01-23T11:11:11Z2017-01-23T11:11:11Z2017-01-2320162018-01-26T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleGenetics and Molecular Research, Ribeirão Preto, v. 15, n. 4, 2016.http://www.alice.cnptia.embrapa.br/alice/handle/doc/1061458enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:04:24Zoai:www.alice.cnptia.embrapa.br:doc/1061458Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:04:24falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:04:24Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
title Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
spellingShingle Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
ALVES, M. F.
Canela-de-tabuleiro
Planta medicinal
Genética
title_short Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
title_full Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
title_fullStr Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
title_full_unstemmed Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
title_sort Analysis of genetic diversity of a native population of Myrcia lundiana Kiaersk. plants using ISSR markers.
author ALVES, M. F.
author_facet ALVES, M. F.
NIZIO, D. A. C.
BRITO, F. A.
SAMPAIO, T. S.
MUNIZ, A. V. C. da S.
ARRIGONI BLANK, M. F.
CARVALHO, S. V. A.
BLANK, A. F.
author_role author
author2 NIZIO, D. A. C.
BRITO, F. A.
SAMPAIO, T. S.
MUNIZ, A. V. C. da S.
ARRIGONI BLANK, M. F.
CARVALHO, S. V. A.
BLANK, A. F.
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv ANA VERUSKA CRUZ DA SILVA MUNIZ, CPATC.
dc.contributor.author.fl_str_mv ALVES, M. F.
NIZIO, D. A. C.
BRITO, F. A.
SAMPAIO, T. S.
MUNIZ, A. V. C. da S.
ARRIGONI BLANK, M. F.
CARVALHO, S. V. A.
BLANK, A. F.
dc.subject.por.fl_str_mv Canela-de-tabuleiro
Planta medicinal
Genética
topic Canela-de-tabuleiro
Planta medicinal
Genética
description Myrcia lundiana Kiaersk. is a tree of the family Myrtaceae found in tropical and subtropical areas of the southern hemisphere that produces essential oil. The aim of this study was to characterize the genetic diversity of M. lundiana plants from a native population of Parque Nacional de Itabaiana, using inter-simple sequence repeat molecular markers. Thirty-five primers were tested, 20 of which were polymorphic, resulting in 135 polymorphic and informative bands. Results of the cluster analysis, obtained using the unweighted pair group method with arithmetic mean, grouped plants into three clusters: Cluster I - MLU001, MLU002, MLU003, MLU004, MLU005, MLU006, MLU018, MLU019, LU020, MLU021, LU022; MLU008, MLU011, MLU012, MLU014, MLU015, MLU017, MLU026, and MLU028; Cluster II - MLU007, MLU009, MLU010, MLU013, and MLU016; and Cluster III - MLU023, MLU024, MLU025, and MLU027. Jaccard similarity coefficients for pair-wise comparisons of plants ranged between 0.15 and 0.87. MLU014 and MLU015 presented low genetic diversity, with a similarity index of 0.87. Conversely, MLU007 and MLU019 presented high diversity, with a similarity index of 0.15. According to the structure analysis, three distinct clusters were formed. Genetic diversity of M. lundiana plants was intermediate, and expansion of its genetic diversity is necessary. MLU026 and MLU028 are the most suitable for selection in breeding programs, since they clearly represent all of the diversity present in these plants. Moreover, these results provide important information on the existing genetic variability, highlighting the importance of Parque Nacional de Itabaiana for the conservation of this species.
publishDate 2016
dc.date.none.fl_str_mv 2016
2017-01-23T11:11:11Z
2017-01-23T11:11:11Z
2017-01-23
2018-01-26T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 4, 2016.
http://www.alice.cnptia.embrapa.br/alice/handle/doc/1061458
identifier_str_mv Genetics and Molecular Research, Ribeirão Preto, v. 15, n. 4, 2016.
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1061458
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron_str EMBRAPA
institution EMBRAPA
reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
repository.mail.fl_str_mv cg-riaa@embrapa.br
_version_ 1794503431246839808