Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.

Detalhes bibliográficos
Autor(a) principal: MIDORIKAWA, G. E. O.
Data de Publicação: 2014
Outros Autores: SOUZA, M. de L. M. de, SILVA, O. F., DIAS, J. do S. A., KANZAKI, L. I. B., HANADA, R. E., MESQUITA, R. M. L. C., GONCALVES, R. C., ALVARES, V. de S., BITTENCOURT, D. M. de C., MILLER, R. N. G.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
Texto Completo: http://www.alice.cnptia.embrapa.br/alice/handle/doc/987473
Resumo: Brazil nut is a protein-rich extractivist tree crop in the Amazon region. Fungal contamination of shells and kernel material frequently includes the presence of aflatoxigenic Aspergillus species from the section Flavi. Aflatoxins are polyketide secondary metabolites, which are hepatotoxic carcinogens in mammals. The objectives of this study were to identify Aspergillus species occurring on Brazil nut grown in different states in the Brazilian Amazon region and develop a specific PCR method for collective identification of member species of the genus Aspergillus. Results:Polyphasic identification of 137 Aspergillus strains isolated from Brazil nut shell material from cooperatives across the Brazilian Amazon states of Acre, Amapá and Amazonas revealed five species, with Aspergillus section Flavi species A. nomius and A. flavus the most abundant. PCR primers ASP_GEN_MTSSU_F1 and ASP_GEN_MTSSU_R1 were designed for the genus Aspergillus, targeting a portion of the mitochondrial small subunit ribosomal RNA gene. Primer specificity was validated through both electronic PCR against target gene sequences at Genbank and in PCR reactions against DNA from Aspergillus species and other fungal genera common on Brazil nut. Collective differentiation of the observed section Flavi species A. flavus, A. nomius and A. tamarii from other Aspergillus species was possible on the basis of RFLP polymorphism. Conclusions:Given the abundance of Aspergillus section Flavi species A. nomius and A. flavus observed on Brazil nut, and associated risk of mycotoxin accumulation, simple identification methods for such mycotoxigenic species are of importance for Hazard Analysis Critical Control Point system implementation. The assay for the genus Aspergillus represents progress towards specific PCR identification and detection of mycotoxigenic species.
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spelling Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.Castanha do brasilEnfermedades y desórdenes de las plantasIdentificación de patógenosNuez del BrasilDoença de plantaCastanha do paráBertholletia excelsaFungoIdentificaçãoAspergillus flavusAflatoxinaPlant diseases and disordersBrazil nutsFungiPathogen identificationAmazoniaBrazil nut is a protein-rich extractivist tree crop in the Amazon region. Fungal contamination of shells and kernel material frequently includes the presence of aflatoxigenic Aspergillus species from the section Flavi. Aflatoxins are polyketide secondary metabolites, which are hepatotoxic carcinogens in mammals. The objectives of this study were to identify Aspergillus species occurring on Brazil nut grown in different states in the Brazilian Amazon region and develop a specific PCR method for collective identification of member species of the genus Aspergillus. Results:Polyphasic identification of 137 Aspergillus strains isolated from Brazil nut shell material from cooperatives across the Brazilian Amazon states of Acre, Amapá and Amazonas revealed five species, with Aspergillus section Flavi species A. nomius and A. flavus the most abundant. PCR primers ASP_GEN_MTSSU_F1 and ASP_GEN_MTSSU_R1 were designed for the genus Aspergillus, targeting a portion of the mitochondrial small subunit ribosomal RNA gene. Primer specificity was validated through both electronic PCR against target gene sequences at Genbank and in PCR reactions against DNA from Aspergillus species and other fungal genera common on Brazil nut. Collective differentiation of the observed section Flavi species A. flavus, A. nomius and A. tamarii from other Aspergillus species was possible on the basis of RFLP polymorphism. Conclusions:Given the abundance of Aspergillus section Flavi species A. nomius and A. flavus observed on Brazil nut, and associated risk of mycotoxin accumulation, simple identification methods for such mycotoxigenic species are of importance for Hazard Analysis Critical Control Point system implementation. The assay for the genus Aspergillus represents progress towards specific PCR identification and detection of mycotoxigenic species.Glaucia E. O. Midorikawa, Universidade de Brasília (UnB); MARIA DE LOURDES MENDES DE SOUZA, CTAA; OTNIEL FREITAS SILVA, CTAA; JUREMA DO SOCORRO AZEVEDO DIAS, CPAF-AP; Luis I. B. Kanzaki, Universidade de Brasília (UnB); Rogerio E. Hanada, Instituto Nacional de Pesquisas da Amazônia (Inpa); Renata M. L. C. Mesquita, Instituto Nacional de Pesquisas da Amazônia (Inpa); RIVADALVE COELHO GONCALVES, CPAF-AC; VIRGINIA DE SOUZA ALVARES, CPAF-Acre; DANIELA MATIAS DE C BITTENCOURT, CPAA; Robert N. G. Miller, Universidade de Brasília (UnB).MIDORIKAWA, G. E. O.SOUZA, M. de L. M. deSILVA, O. F.DIAS, J. do S. A.KANZAKI, L. I. B.HANADA, R. E.MESQUITA, R. M. L. C.GONCALVES, R. C.ALVARES, V. de S.BITTENCOURT, D. M. de C.MILLER, R. N. G.2014-06-02T11:11:11Z2014-06-02T11:11:11Z2014-06-0220142019-01-09T11:11:11Zinfo:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleBMC Microbiology, v.14, n. 138, 2014.1471-2180http://www.alice.cnptia.embrapa.br/alice/handle/doc/98747310.1186/1471-2180-14-138enginfo:eu-repo/semantics/openAccessreponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)instacron:EMBRAPA2017-08-16T04:24:18Zoai:www.alice.cnptia.embrapa.br:doc/987473Repositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestopendoar:21542017-08-16T04:24:18falseRepositório InstitucionalPUBhttps://www.alice.cnptia.embrapa.br/oai/requestcg-riaa@embrapa.bropendoar:21542017-08-16T04:24:18Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)false
dc.title.none.fl_str_mv Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
title Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
spellingShingle Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
MIDORIKAWA, G. E. O.
Castanha do brasil
Enfermedades y desórdenes de las plantas
Identificación de patógenos
Nuez del Brasil
Doença de planta
Castanha do pará
Bertholletia excelsa
Fungo
Identificação
Aspergillus flavus
Aflatoxina
Plant diseases and disorders
Brazil nuts
Fungi
Pathogen identification
Amazonia
title_short Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
title_full Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
title_fullStr Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
title_full_unstemmed Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
title_sort Characterization of Aspergillus species on Brazil nut from the Brazilian Amazonian region and development of a PCR assay for identification at the genus level.
author MIDORIKAWA, G. E. O.
author_facet MIDORIKAWA, G. E. O.
SOUZA, M. de L. M. de
SILVA, O. F.
DIAS, J. do S. A.
KANZAKI, L. I. B.
HANADA, R. E.
MESQUITA, R. M. L. C.
GONCALVES, R. C.
ALVARES, V. de S.
BITTENCOURT, D. M. de C.
MILLER, R. N. G.
author_role author
author2 SOUZA, M. de L. M. de
SILVA, O. F.
DIAS, J. do S. A.
KANZAKI, L. I. B.
HANADA, R. E.
MESQUITA, R. M. L. C.
GONCALVES, R. C.
ALVARES, V. de S.
BITTENCOURT, D. M. de C.
MILLER, R. N. G.
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Glaucia E. O. Midorikawa, Universidade de Brasília (UnB); MARIA DE LOURDES MENDES DE SOUZA, CTAA; OTNIEL FREITAS SILVA, CTAA; JUREMA DO SOCORRO AZEVEDO DIAS, CPAF-AP; Luis I. B. Kanzaki, Universidade de Brasília (UnB); Rogerio E. Hanada, Instituto Nacional de Pesquisas da Amazônia (Inpa); Renata M. L. C. Mesquita, Instituto Nacional de Pesquisas da Amazônia (Inpa); RIVADALVE COELHO GONCALVES, CPAF-AC; VIRGINIA DE SOUZA ALVARES, CPAF-Acre; DANIELA MATIAS DE C BITTENCOURT, CPAA; Robert N. G. Miller, Universidade de Brasília (UnB).
dc.contributor.author.fl_str_mv MIDORIKAWA, G. E. O.
SOUZA, M. de L. M. de
SILVA, O. F.
DIAS, J. do S. A.
KANZAKI, L. I. B.
HANADA, R. E.
MESQUITA, R. M. L. C.
GONCALVES, R. C.
ALVARES, V. de S.
BITTENCOURT, D. M. de C.
MILLER, R. N. G.
dc.subject.por.fl_str_mv Castanha do brasil
Enfermedades y desórdenes de las plantas
Identificación de patógenos
Nuez del Brasil
Doença de planta
Castanha do pará
Bertholletia excelsa
Fungo
Identificação
Aspergillus flavus
Aflatoxina
Plant diseases and disorders
Brazil nuts
Fungi
Pathogen identification
Amazonia
topic Castanha do brasil
Enfermedades y desórdenes de las plantas
Identificación de patógenos
Nuez del Brasil
Doença de planta
Castanha do pará
Bertholletia excelsa
Fungo
Identificação
Aspergillus flavus
Aflatoxina
Plant diseases and disorders
Brazil nuts
Fungi
Pathogen identification
Amazonia
description Brazil nut is a protein-rich extractivist tree crop in the Amazon region. Fungal contamination of shells and kernel material frequently includes the presence of aflatoxigenic Aspergillus species from the section Flavi. Aflatoxins are polyketide secondary metabolites, which are hepatotoxic carcinogens in mammals. The objectives of this study were to identify Aspergillus species occurring on Brazil nut grown in different states in the Brazilian Amazon region and develop a specific PCR method for collective identification of member species of the genus Aspergillus. Results:Polyphasic identification of 137 Aspergillus strains isolated from Brazil nut shell material from cooperatives across the Brazilian Amazon states of Acre, Amapá and Amazonas revealed five species, with Aspergillus section Flavi species A. nomius and A. flavus the most abundant. PCR primers ASP_GEN_MTSSU_F1 and ASP_GEN_MTSSU_R1 were designed for the genus Aspergillus, targeting a portion of the mitochondrial small subunit ribosomal RNA gene. Primer specificity was validated through both electronic PCR against target gene sequences at Genbank and in PCR reactions against DNA from Aspergillus species and other fungal genera common on Brazil nut. Collective differentiation of the observed section Flavi species A. flavus, A. nomius and A. tamarii from other Aspergillus species was possible on the basis of RFLP polymorphism. Conclusions:Given the abundance of Aspergillus section Flavi species A. nomius and A. flavus observed on Brazil nut, and associated risk of mycotoxin accumulation, simple identification methods for such mycotoxigenic species are of importance for Hazard Analysis Critical Control Point system implementation. The assay for the genus Aspergillus represents progress towards specific PCR identification and detection of mycotoxigenic species.
publishDate 2014
dc.date.none.fl_str_mv 2014-06-02T11:11:11Z
2014-06-02T11:11:11Z
2014-06-02
2014
2019-01-09T11:11:11Z
dc.type.driver.fl_str_mv info:eu-repo/semantics/publishedVersion
info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv BMC Microbiology, v.14, n. 138, 2014.
1471-2180
http://www.alice.cnptia.embrapa.br/alice/handle/doc/987473
10.1186/1471-2180-14-138
identifier_str_mv BMC Microbiology, v.14, n. 138, 2014.
1471-2180
10.1186/1471-2180-14-138
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/987473
dc.language.iso.fl_str_mv eng
language eng
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.source.none.fl_str_mv reponame:Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
instname:Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
instacron:EMBRAPA
instname_str Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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reponame_str Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
collection Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice)
repository.name.fl_str_mv Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA - Alice) - Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
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